Crotalus tigris (Tiger rattlesnake): 120299613
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Entry
120299613 CDS
T08476
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120299613 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120299613 (SRF)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
120299613 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
120299613
NCBI-ProteinID:
XP_039180521
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MLPSGAGNGAAALARSTIMGMGRTSGRVGAGLPRGANGSGAAAGVRGPGNGTGPPSGQGT
IGGRFERDRDVSAAAAAAASGSEGDSDSAEDEELVGERRGIKRTLGDMELGVGGTEAVAA
AAASGGYGGVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKNLERDL
NTLTAPLDGGGAPVSNTEAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKA
LIQTCLNSPDSPPRSDPTSDQRMSATGFEETDLTYQVSESDSSGETKDSLKPAFTVTNLP
GTTSTIQTASTTSTSMQVSSGPSFPITNYLAPVSASVSPSTVTSANGTVLKTTGSSAVAS
GGLMQIPTGFTLMSAGAPLPPGTPTIPLTHLQPHSLALSSQQGQAAVVGIPGQLQQAQQT
VFRFPATAGGQIVSLTGGAMAQQVPVQAIQVHQAPQQTSPTSDSSTDITQTSSSGTVTLP
ATIMTSSVPTTVGGHMMYPSSHAVMYAPTSGLTDGGLAVLNAFSQAPSAMQVSHGQVQDQ
GGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQSSSTANLTELQVVNLETSHGSKSD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttacccagcggggccgggaacggcgctgccgccttggcccggagcacgatcatgggc
atggggcggacctccgggcgggtaggtgccgggcttccccgtggggcgaacggcagcggt
gctgctgcaggagtccgcgggcccggcaacgggacaggcccgcctagcgggcaggggaca
atcgggggtcgcttcgagcgagaccgggatgtaagcgcggcggcggcggcggcggccagc
ggcagcgaaggcgattcggactcggccgaagatgaggagttggtaggcgagcgccgcggc
attaagcggaccttgggtgacatggaactgggggtggggggaacggaggcggtggccgcg
gcggcagcgtccgggggttacggcggagtcagcggggccgtgagcggcgccaagccaggc
aagaagacccgcggccgggtcaagatcaagatggaatttatcgacaacaagctgcgacgc
tacaccacgttcagcaagaggaagacgggcattatgaagaagaatctggaaagagacctt
aacactttgactgctccattggatggaggtggggctccagtatccaacactgaggcctat
gaactttccacccttacgggtactcaagtgttgctacttgtggccagtgagacaggccac
gtctacacttttgctacacggaaactgcagccaatgatcaccagcgagacggggaaggca
ctgatccagacatgcttgaattctcctgactcccctcctcggtcggatccaaccagcgat
cagcgcatgagtgctacgggctttgaggaaacggaccttacgtatcaggtgtctgagtca
gacagcagtggagaaacaaaggactcactgaagccagcattcactgtcaccaacctccca
gggacgacgtccaccatccagacagcatccacaacatccacatccatgcaggtcagcagt
gggccctcgttccccattactaactacttagcaccagtctctgccagtgtcagccccagt
acagtcaccagtgccaacggaacagtgctgaaaaccactggaagcagcgcagtggcctct
ggaggactaatgcagatacctaccggctttactctcatgtcagcaggtgctccactccct
cctgggacccctaccattcctctcactcacttacagccgcactcgctggccctctccagc
cagcagggccaggcggcggtcgtaggcatacctggacagctgcagcaggcacaacagaca
gtcttccgatttccagctacagccggagggcagattgtgtctctgacaggtggtgcaatg
gctcaacaggttcctgtgcaagccatccaggtgcatcaagccccccagcaaacgtctcct
acaagcgacagcagcactgacatcacacagacctcttccagtgggacagtgaccctgcca
gctacaatcatgacttcatctgtgccaaccactgtgggaggccatatgatgtaccccagt
tctcatgcagtgatgtatgctcctacatcgggtctcacggatggtgggcttgcggttctc
aatgccttttcccaggccccatcagcaatgcaggtttcacatgggcaagtccaggatcag
ggtggagtccctcaggtattcctgacagctccgtcaggaacagttcagatcccagtctca
gctgttcagcttcaccagatggctgtcattggtcagcagagcagcagcactgccaacttg
acagagctgcaggtggtcaacttggagacatcacatggttccaagagtgactga
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