Crotalus tigris (Tiger rattlesnake): 120299625
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Entry
120299625 CDS
T08476
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120299625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120299625
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120299625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
120299625
NCBI-ProteinID:
XP_039180542
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MATDLEPAAGQLEAEEDEEQWLYGDDNGKPEDGPISGHTESHPLQDIPKETRMVISEDQE
LLQQTIPSGEDEEESDSDDDIRVTIGNIKTGAPSYLGTPMNLNLKTGRGYGAPASAKSQP
KGIDLEASGNINGLPVIEVDLESFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQ
LGLEPSVPVCTENKITVQQGRTGNAEKEPENNIVKMDFKTDFVALVGGRIKAGPPPNRKL
GGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPAQPPQQQPFVPPAGPP
PALSGPPPHFLHPPPPPVASVPPPLHPPGLFPPPLAPPPALLIPTLDGQPASYSNRQPPP
FGYNSTDSGFITYPPISTSHTPWVTTVDKASSASDSSHWEYSGSRRERDRERDRTPTTSE
YNNDDERYRYYSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHE
SEEGESHRRHKHKKNKHSKEKEASEDGLAEGNEQEAKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacctggagcccgcggccgggcagctggaggcggaggaggacgaggagcag
tggctctacggagatgacaatggtaagccagaagatggaccaatatctggacacaccgaa
tctcatccattgcaagacattcctaaggagaccaggatggttatcagtgaagaccaagaa
ctgttgcagcagaccatcccaagtggggaagatgaggaggagagcgacagtgacgatgac
attcgcgtcacgattggcaacatcaagactggagccccatcttatttggggactccaatg
aatctgaatctaaaaacgggtcgaggctacggagcaccagcatcagccaagtcacagcct
aaaggtattgatttagaggcttcggggaatattaacggcttgccggtaatcgaggtggat
ttagaatcgtttgaagacaaaccgtggaggaaaccaggtgccgacctttccgattatttc
aactacggattcaacgaggaaacatggaaagcctattgtgaaaaacagcgccggcttcag
ctgggcctggagccttcggtccctgtctgcacggaaaataagatcacggttcaacaagga
agaacaggcaatgccgagaaagaacccgagaacaacatcgtcaagatggattttaaaact
gattttgttgcgctcgttggcggaaggataaaagccgggcctcctccaaacaggaagctg
ggtgggacaatcgacgtgattggtggtcaggctggcaccatccggagggtggaaggaagg
cgacgcgacaaacacgcttctgaagaaaaccccattcaggtacttggagaccatgggagc
aaacctcagcctgctcagcccccccagcagcagccatttgtgcccccagcaggcccacct
ccagcattaagtgggcctccgccccactttctccatcctcctccgccgccggttgcctcc
gtcccaccacccctccaccctccagggctgtttcctccaccacttgctccaccaccagct
ctcttgattccaactttggatggccagccagccagctacagcaaccggcagccacctccc
tttggctacaactccacagattcaggttttatcacctacccgcccatttcgacgtcgcac
actccctgggtgaccacagttgacaaggcctccagtgcttcagacagcagccactgggaa
tactcgggctcaaggagagagagagacagagagcgggaccggacacccaccacgagcgaa
tataacaatgacgatgagagataccgttattatagccgggaacgcagttacgattttgag
cgcgactatcgccggagtagagatcgcagccgggagcgtgaagatcgtcaccgggaaagg
aggcacagagacaaagaagagagcagcaaacataaatcgtcacggcgcaagcagcatgag
agcgaagaaggggagagccaccgtcgacacaagcacaaaaagaacaagcacagcaaagag
aaggaggcgagcgaagatggacttgcagaaggaaacgaacaggaagccaaggagtag
DBGET
integrated database retrieval system
