Crotalus tigris (Tiger rattlesnake): 120299833
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Entry
120299833 CDS
T08476
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5 isoform X1
KO
K19474
homeobox protein SIX5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120299833 (SIX5)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120299833 (SIX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120299833
NCBI-ProteinID:
XP_039181005
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MASFPSEPAEPPGRGPPATPPAAPGSGGAEPRKLLPTSPPAPSRAEPGAPPLPAAPSPPP
PAAAAAAAGLPRFSAEQVSCVCEALLQAGDPGRLGRFLGSLPAEEAARLEASSGSAGESL
AKARALLAFEQADFGELYRLVQSRPFGAPHHPFLQDLYLRARYREAEAARGRALGAVDKY
RLRKKFPLPATIWDGEETVYCFKRRSRAALRDSYGRSRYPSPEQKRRLARDTGLSLTQVS
NWFKNRRQRDRGGGGGGGGADGGAAGGGGGGTPSKSESDGNPSTEDESSRGPEDMEAAGG
LSTSHEGIVAPSGLFLPAACTSASSILLNGNFITASSPPAMLLNGGSVIQTPTGGVILNG
LTLGDNQTLTLSPVAAPSPPILLNGSASLLSPKPSKTEEMGKAPPEPLSPAAGVILNPVA
LQGEVKSENVEPLAFGVEMKSEDGQGAALPPLLSLPDTSPLLSEHKGALLAAVPMPQVVP
SNEESPTVPLLSVAPQPAAPQSPQIVPLAKLVPVGQALPASQGTGPVGTGQGSTVVASPA
ITATPLLSLPGSSTTQATVLHVSAPSLLPLTQVSPPSQVVPLSQTVPGAQLLSPPQMVPV
SPTQIYTMSHGAPPPQLVSIPQVAQGSQLISLPQVVPTSQVVTLQQGMGSPIQILTSAAP
IKVGPVAGTPQGPGATGGLGPNNVHLLNTGVGVTALQLPSPAQGNLILANPTTGNSTIVT
GMAVQQGKLNLTATFPASMLMTLVLSAPAASTLTLPIKQEMAVATPVAVGASEGNGGLLP
GVPSVLPSEVSPLSSSNSTGPASVAFGPDISPGSLLSSFSQPETLSVSQPQVVWSSPVSL
DLQGNNSEGLFEMEKGSMEELRLPEGEGLLLDAAEGDALGPEALDSDEKVLTQLQSVPVE
EPLDL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcccctccgagcccgccgagcctcccggccgcggcccacccgcaaccccg
ccggccgcgccgggcagcggcggagcggagccgcgcaaacttttgccaacttcgccgccc
gccccgtcccgcgcggagcccggcgcgcctccgcttcctgcagcgccttctcctcctcct
cctgccgctgccgctgcggccgccggcctgccgcgcttctcggccgagcaggtctcgtgc
gtgtgcgaggcgctgctgcaggcgggcgacccgggccggctgggccgcttcctgggctcg
ctgccggccgaggaggcggcgcggctggaggcgtcgtcgggctcggcgggcgagagcctg
gccaaggcgcgggcgctgctggccttcgagcaggccgacttcggcgagctgtaccggctg
gtgcagagccggcccttcggggcgccccaccaccccttcctgcaggacctctacctgcgg
gcgcgctaccgggaggcggaggcggcgcggggccgggcgctgggcgccgtcgacaagtac
cgcctgcgcaagaagttcccgctgccggccaccatctgggacggcgaggagacggtctac
tgcttcaagcgccgctcccgcgccgccctgcgcgactcctacgggcgcagccgctacccg
agtcccgagcagaaacgccgcctggcccgcgacaccggcctctcgctcacccaggtcagc
aactggttcaagaaccggcggcagcgcgaccgaggcggcggcggcggcggtggcggagcg
gatggaggagcagcgggaggaggaggaggaggcacgcccagcaagagtgaatctgatggg
aaccccagcacagaggacgagtccagccgcggtcctgaagacatggaagctgctgggggg
ctgtccaccagccatgagggaatcgtggcccccagcggcctgttcctgccggcggcctgc
accagcgcctcttccatccttctgaacgggaacttcatcaccgccagctcccccccggcc
atgctcctgaacgggggctcggtgatccagacccccaccggaggggtcatcctgaacggg
ttgactctaggagacaaccaaaccctcaccctcagccccgtggcagctcccagcccaccc
atcctcctgaacggctctgccagcctgctgagccccaagccctccaagacggaggagatg
ggcaaagccccaccggaacccctctccccagccgcgggggtcatcctcaacccggtggct
ctccagggagaggtgaagtcagagaacgtcgagccgctggcgttcggggtggaaatgaag
tcagaggatgggcagggggcagccctcccgcctctcctgtctctcccggacacctcccca
ctcctctccgagcacaagggggcgctgttggctgcggtgcccatgcctcaagtggtccct
tcgaatgaagaaagtcccacggtccccctgttgtccgtagcccctcaaccggcagcgccc
caaagtccacagattgtgcctcttgccaaactggtccctgtcggtcaagctctgcccgct
tcccaaggaacagggcccgtaggcaccgggcaggggtccacagtggtggcatctcctgcc
atcaccgccacccccctcctctctctccctgggtcctctacaacccaggccaccgtcctc
cacgtttctgccccatcccttctcccactcacccaggtatcacccccttcccaggtggtc
cctctgtcccagacggttcccggggcccagctgttgtccccacctcagatggtccctgtg
tctcccacccagatctacaccatgtcccatggggctccaccacctcaactggtctccatt
cctcaagtggcccagggctcccagctcatctccttgccccaagtggtgcccacctctcag
gtggtgactctgcaacagggcatgggcagtcccatccagatcctgacaagtgccgccccc
atcaaggtgggtcctgtggctgggaccccacaaggcccaggggccactggaggccttggc
ccgaacaacgtccatcttctcaacaccggtgtcggcgtcacagccctgcagcttccaagc
ccagcacaaggtaaccttatcctggccaacccaaccaccggcaatagcaccatcgtcacc
ggcatggccgttcagcaaggcaaacttaacctcactgccaccttcccagctagcatgctg
atgacccttgtcctctccgctccggcagcctcaaccttgactcttcccatcaagcaggag
atggcggtggccacaccggtagctgtgggggcctctgaaggcaatggtgggttgcttccc
ggagtcccctcagtgttgccctccgaagtctcccctctttcgtcctccaacagcactggg
ccagccagcgtggcctttggaccagacatcagcccaggctcccttctttccagcttttcc
cagccagagaccctgtccgtgtcccagccgcaggtggtatggtccagcccggtgagcctg
gacctgcaggggaacaactctgaggggctgtttgagatggagaaggggtcaatggaggag
ctccggttgcctgaaggcgagggtcttctgctggatgctgctgagggggatgccctgggt
cccgaagctctggactcggatgagaaagtgctgactcagctgcagtcggtcccagtggaa
gagcctctggacctgtga
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