Crotalus tigris (Tiger rattlesnake): 120299834
Help
Entry
120299834 CDS
T08476
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120299834 (NPAS1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120299834 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
120299834
NCBI-ProteinID:
XP_039181007
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MASLYGSEGVKCFSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELA
KLLPLPGAITSQLDKASIVRLTITYLKMRHFALHGDPPWTLRAEGPAPAGNASGRRNMNT
LLTELFEKHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSIFDYVHP
GDHHEVAEQLGLKAPLGLGHAPHPKASLLGASSEGPQSDLSSSRTAEGDGALERSFFIRL
KSTLTKRGLHIKTSGYKVIHVTGCLRSRRPSHSHGHSVLGRVLGLVALAHTLPPSTLSEV
RIECHMFVFRVNMDLQIVYCESRISDYMDLCPSELVGKSCYRFIHGEDVEGIQQSHLDLL
NKGQVVTRYYRWLQKSGGFVWVQSCATISINVKNPSERNMVWVNYILSKPECKNIALDVF
QVPGIPARQTEAPSAGTDYKESDRGKPCPASKPAGTLAQSYPRSVAEMGRHCHLVESKSR
GPETKYLEEEEEEEEEEEEALEEEAGSDTKTPPRKRIKLEFPLESPPPKGKGETLLASSE
DSDSSSDSEPEMVPQQAGPLARKVNGCKPGGRKTMVPGRPCMSEFTSVIQTQKGASLRAS
PALSIKSEQGPRAKGGLWTCPGGKGSPFPKNKAVRLEKPLVRQAPSHLFVSIPDSVLTPP
EMDSGPVKGPFSTSPRVAPSSSGDTLSPPLSGSPCEDRGTATPFTPLIYPTEMEVLQRFH
TSNVVVPLMHQLSNPHASSSAGSPGLYATSTIRYAPADMTLAMPSNMLPPSHHPLSLMDI
GSAEAKTSREIMYHHLQRLNMVAPFGNSASLAQISGGAFTAADSLFSTLPFSVASGGIHS
GPALERKED
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctctacggcagcgagggggtcaagtgcttcagcgtggaatgggacttcctg
cagggcctgctggtcaagaaccagccggtgccctgcctgcaggctctacggaaggaaaaa
tcccgcaacgcagctcgctcccgccgaggcaaggagaactttgagttctatgaactggca
aaactattgcccctgcccggtgccatcaccagccagctggacaaggcctccatcgtccgg
ctcaccatcacctacctgaagatgcgccacttcgccctccacggcgacccaccctggacc
ctgcgggcagagggcccggccccggcaggcaacgcttctggtcggagaaatatgaacacg
ctgctgacggagctctttgaaaagcacttagggggccacatcctgcagtccctggatggc
ttcgtctttgcactgaatcaagagggaaaattcctttacatctccgagacggtgtctatt
tacctgggcctgtcacaggtggagctgaccggcagcagcatcttcgactacgtccacccg
ggggaccaccacgaagtggccgagcagctggggctgaaggctcccctgggccttggtcac
gccccccaccccaaagcctccctcctgggcgcttcctctgagggtcctcaatcagatctt
tctagttcccgcacagccgaaggtgatggagccctggagcgttccttcttcatccgtctg
aagtccactttgaccaagagaggacttcacatcaagacttcgggctataaggtgatccat
gtcacgggctgtctccgttccagacgaccgtcacattcccacggccactcagtgctgggc
cgggtgctgggacttgtagcgctggcccacaccctgccgccctccaccctcagcgaggtg
cgcattgaatgtcacatgttcgttttccgggtcaacatggacctacagatcgtgtactgt
gagagcaggatctccgattacatggacttgtgtccctcagaacttgttgggaaaagctgc
tatcgcttcattcatggagaagacgtggaggggatccagcagagccacctggacttgtta
aacaaggggcaggtggtcacccgctattaccgctggctgcagaagagcgggggcttcgtc
tgggtccagtcctgcgccaccatctcgatcaatgtcaagaatccctccgagaggaacatg
gtgtgggtgaactacatcctcagcaagccggaatgtaagaacattgccctggatgttttc
caggttcctggcatccccgccagacagacagaagcgcccagcgcgggaacggattacaaa
gagagtgaccggggaaagccgtgcccagccagcaagccagcggggaccctggcccagtcc
taccccaggagcgtggccgaaatgggtcggcactgccacctggtggagagcaagtccagg
ggtcctgaaaccaaatacctggaagaggaggaggaggaggaggaggaggaggaggaggca
ttggaggaagaggctgggagtgacacaaagactcccccgaggaagcggatcaaactggag
ttcccgctggagagccccccacccaaggggaagggggagaccttgctggctagctccgag
gactccgacagcagcagcgattcggagcccgagatggtcccccaacaggcggggcccctg
gccaggaaggtgaatggctgcaagcccggcggacggaagaccatggttcccggccgtccc
tgcatgtcggagttcacctctgtcatccagacccaaaagggcgcctcgctcagagccagc
ccagcccttagcatcaaatcggagcaaggaccccgggccaaagggggtctctggacctgt
cctggagggaagggcagccctttccccaaaaacaaagccgttcggctggagaagccccta
gtgagacaggcaccctcacatttgttcgtctccattcccgactctgtgctcacccctccc
gagatggacagcggtccggtcaaggggcctttcagcacctctccccgggtggctccgtcc
tcctcaggggacacactctcgcctccgctctcgggctccccttgtgaggaccgggggacc
gccacccccttcaccccactgatctacccaacggagatggaagttctccagaggttccac
acgagcaacgtggttgtccccttgatgcatcaactcagcaatccgcacgccagctcctca
gcgggctccccgggactctacgccacgagcaccatccgttacgcccctgcagatatgacc
ctggccatgccgagcaacatgctgcccccttcccaccaccccctcagcctcatggacatc
ggcagtgccgaggccaagacctcgcgggagatcatgtaccaccacctgcagcgacttaac
atggtggccccctttgggaactcggctagtttggcccagatttcgggaggggcctttact
gccgctgactctttgttttccaccctgcccttctccgtggccagtggtgggatccacagc
gggccagctctggaacgcaaggaggattaa
DBGET
integrated database retrieval system
