Crotalus tigris (Tiger rattlesnake): 120299870
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Entry
120299870 CDS
T08476
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120299870 (HIF3A)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120299870 (HIF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
120299870
NCBI-ProteinID:
XP_039181074
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MWWRWKRARGRRWCRSTTEIRKEKSRDAARCRRSKETEVFYQLAHTLPFARGVSAHLDKA
SIMRLTISYLRMHKLLNSGEWRDQVKAEEQVDSYYLKALDGFLMVLTEEGDMIYLSENVN
KHLGLSQLELIGHSVFDFIHPCDQEELQDVLSPRQGFSKKGEVKTERNFSLRMKSTLTTR
GRTVNLKSATWKVLHCSGHMRCYAPSKLAAGKEGEGGFTEPPLRCLVLICEAILHPANIE
TPLDSGTFLSRHTMDMKFTYCDDRIVEMAGYTSESLLGCSLYEYIHALDSDSISKSINTL
LSKGQAVTGQYRFLARNGGYIWIQTEATVISSSKNSQPESIVCMHFVLSLAIVALQMLSE
LCHRISPFWFHPAVEENGLVLSLEQTDRQGEHRRLPPPCLEGLDSESALDEMDPNGGDTI
INLSFELRGPKILAFLRPANISEEELQLDPKRFCSPDLQKLLGPIFDPPGAQNSAGGTVR
AKPPAPIAKLAPVVKKASGNHSPADLPEELVFDMENVQKLFASNKEEQSVETTLQDYEGL
DLEMLAPYISMDDDFQLSSTDHPPWLAEKRRDPAGAGARPASPPPRPRSRSFHGVSPRPP
EAPTLPRWGSDSSLSQGRPVETSLANSPCGEGQMVEMVASVKIQSVQDGAGLNGHRSPLG
GKKRAREISLDEERDLFLETSPPKRAHNHEAEGFLMPSLSLGFLLSVEECLDARSERGCG
GTVALGKKLLALEEPMGLLGDMLPFVVDGPALSQLALYDGEEEVSGRGGEHFQLGEELLV
ELDQAT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggcgctggaagcgggcgaggggcaggaggtggtgcaggtccaccaccgaaatc
cggaaggagaaatcccgagacgcagcgcgatgccgacgcagcaaggagacggaggtgttc
taccagctggcccacaccctgcccttcgctcggggggtgagcgcccacctggacaaggcc
tccatcatgcgcctgaccatcagctacttgaggatgcataagctgctgaattctggagaa
tggcgagatcaagtcaaagcagaagagcaggtggattcttactacctgaaggccctggat
ggcttcctgatggtcctgactgaggaaggggacatgatctacctctctgagaatgtcaac
aagcacctgggcctcagccagttggagctgattggccacagcgtgtttgatttcatccac
ccctgtgatcaggaggagctgcaggatgtgctgagccccaggcagggtttctccaagaag
ggggaagtgaagacggagcgcaacttctccttgcgcatgaagagcactctcaccaccagg
gggcgcaccgtcaacctcaagtcggccacctggaaagtgctgcattgctctgggcacatg
cgctgttatgcgccgtccaagctggctgcagggaaagaaggtgaaggtggctttacagaa
cccccattgcgctgcctggtgctcatctgcgaggcgatcctgcaccccgccaacatcgag
acccccctggacagcggcaccttcctcagccgtcacaccatggatatgaagtttacctac
tgcgacgacaggattgtcgagatggctggttacacctctgaaagcttgcttggctgctcc
ctctacgagtacatccacgccttggattcggattccatcagcaagagcatcaacaccctg
ctaagcaagggccaagccgtgaccgggcagtaccgcttcctagccaggaatggtggctac
atctggatccagaccgaggccaccgtcatctccagcagcaagaactcccaacccgagagc
atcgtttgcatgcatttcgtcttgagccttgcaatcgttgccctgcagatgttaagcgaa
ttatgtcaccggatttctccattttggtttcaccccgctgtggaagagaatggcctggtc
ctgtccctggagcaaacggaccgccaaggggagcatcgccggctgcccccgccctgcctc
gaagggctggactccgagagcgccttggatgagatggaccccaacggaggagacaccatc
atcaacctcagctttgagcttcgtggtcccaaaatcctggccttcctgcgcccggccaac
atcagcgaggaggaattgcagctggatcccaaacgcttctgcagtccggatctccagaaa
ttgctggggcccatctttgacccgcccggggctcagaactcagcaggggggaccgtgcgg
gcaaaaccccctgccccaattgccaagctggctccagtggttaagaaggcatctggaaac
cacagtccagcggacctgcccgaggagttggtgtttgacatggagaacgtgcagaagctc
tttgcatccaacaaggaggagcagagcgtggagacgaccctgcaggattacgaaggcctc
gacctggagatgctggctccatacatctcgatggacgacgatttccagctcagcagcacc
gaccacccgccctggctggccgagaagcgaagagatccggcgggggcaggagcccggccc
gcttcgccccctcccaggcctcggtctcgaagtttccatggcgtctctccacgcccacca
gaagcgcccacccttccccgctggggcagcgacagcagtttgagccagggccgtcccgtc
gagacatctctggccaactcgccctgcggagaaggccagatggtggagatggtggcgtcg
gtcaagatccagtctgtgcaggacggggccggtctgaatggccacaggtcccccctgggc
gggaaaaagagggctcgggaaattagcctggatgaagagagggatctcttcctggaaacc
agtccccccaagcgtgcccataaccacgaggctgagggattcctgatgccctcgcttagc
ctgggctttctgctcagtgtggaagagtgtctggatgcccggtccgagcggggctgcggg
ggcactgtagccctgggcaagaagctgctggccctggaggagcccatgggcctcttagga
gacatgctgcccttcgtggtggacggaccagcgctctcccagctggccctgtacgatggc
gaggaggaggtctccgggcgtggtggagagcatttccagctgggggaggagctcctggtg
gagctggaccaggccacctga
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