Crotalus tigris (Tiger rattlesnake): 120300280
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Entry
120300280 CDS
T08476
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120300280
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120300280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Syndecan
MCR_gamma
Motif
Other DBs
NCBI-GeneID:
120300280
NCBI-ProteinID:
XP_039182032
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MEQCIRSKQGMYLFWLLCLPGALCISIYYSTLEETKSGSIVANVLKDLKLEVEEFIDRRA
HLISQSTKQYFSLDLHTGDILINDKVDRDVLCGQTDACILTSQIVLDNPLESYNMEIEIE
DINDNAPKFSKNEFEIEIPENVPTNMVIPLESADDEDLGENSIQNYTLSANEYFWLHVQR
NKDGINNVDLVLKRSLDREKVPHLNITLMAVDGGVPQKTGTVQINIDVLDNNDNPPQFSQ
SEYKVKIKENLPTGTAVAKVEATDLDVGSNAQVTYSFHRTPEKIKSLFLLNERTGEITVK
GQTDYEKERSYSINIRAIDGGGLSGRTKIIIEVEDVNDNPPEVSIISLTSILKEDSPLEK
VVALFSVRDQDSGDNSKTVCSVDMNLPFVLKGTTNNFYQLVLQSPLDRETVTEYNITITA
IDCGSPRLTSTRLINVQISDVNDNPPLFEKSSYDMQIRENHIPGLLIGSVHAVDLDTKQN
AKVTYSVLPGKGGGLLPTLISINSETGNLYALRSLDYEQIRGFRVTVRASDDGSPSLSSE
VIVRIHIIDENDNAPFFLYPLQNNTSPCNELLPKSAEAGYLVTKVVAVDADSGQNSWLSY
ELLKATDPALFSIGAQNGEVKTRRALNERDTNKQRLVILVRDNGLPPQTSTALLNVLLVD
GFSDPFLRRVEVSVQEPEEDKTLTKYLVICLAAVSFVFLVCIVVFIVVKILKKDPQSHFS
AAVPHFPPASADAPENCADSQNGSLSRTYRYDVCLTGGSLSSEFRFLRPLFPVFSVGDVN
VPGNHKSSSSTQYIPKQDADERLNEQSSMLTLFLFNFYLRSLDNVIKPGAKADEDYETRG
AGMISLY
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatgcattaggagtaaacaaggtatgtatcttttttggttgctttgtcttcct
ggagcattatgtatttcaatctattattctacactggaagaaaccaaaagtggttctata
gtggctaatgtgctgaaggatttgaaactggaagtagaggaattcattgatcgcagagcc
catctcatttctcaaagcactaagcagtatttctccctggatcttcatactggggatata
ttgataaatgataaagtagaccgagatgttttgtgtggccagacagatgcttgcatactt
acctctcaaattgtgcttgacaaccctttggaatcatataatatggaaatagaaatagaa
gacataaacgacaatgctcccaagttctctaaaaatgaatttgagatagaaattcctgag
aatgttcctacaaatatggtaattcccttggaatctgcagatgatgaggacctaggagaa
aacagcatccaaaactatacactcagcgccaatgaatatttttggcttcatgtgcaaagg
aacaaagacggaattaacaacgtggatcttgttctaaagagatcactagacagagaaaag
gtgccacatctcaatatcaccctaatggctgttgatggtggggtaccacagaaaacaggc
actgttcaaattaatattgatgttctggacaataatgataaccctcctcaattttcccaa
tctgaatataaggtaaaaataaaggaaaaccttcctacgggcactgcagtggctaaagtg
gaagctacggatcttgatgtgggttcaaatgcacaagtcacctactcattccacagaacg
cctgaaaaaataaagagtttgttccttttaaatgaaaggactggagaaatcactgttaag
ggacagactgattatgaaaaagaaagaagttatagcataaatatcagagcaatagatgga
ggaggactttcaggacgcaccaagataataatagaggttgaagatgtcaatgacaacccc
ccagaagtgtccatcatatctctgaccagcatcttaaaggaggattccccattggagaag
gtggtggccctcttcagtgttagagaccaagactctggagacaacagcaaaacggtctgc
tctgtggacatgaatctcccttttgtgctcaaaggcaccacaaacaacttttatcagctt
gtgctccaaagtcctctagacagagagacggtcactgagtacaacatcaccatcacagcc
attgactgtggctctcctaggctcacttcaacaagactgattaatgttcagatctccgat
gtcaatgataaccctcctctttttgaaaagtcttcatatgacatgcagatccgggagaat
catattccaggtttgctcatcggctcagtccacgctgtggatctggacacgaagcagaat
gcaaaagtgacttactcagttctgcctgggaagggtggtggccttttgcccactctcatt
tcaatcaactctgaaactggaaacctgtatgccctccgatccctggactatgagcagata
agaggcttcagagttactgtgagggcctctgatgatggttctccttccctgagctcagaa
gtgattgtccgcatccacatcatagatgaaaatgacaatgctcccttcttcttgtatccc
ctccagaacaacacatccccatgcaatgagctgcttcccaagtcagccgaggccggctat
ctggtcaccaaggtggttgcagtggatgcagattctggccaaaactcttggctttcctat
gaattgctgaaggccacggacccagcccttttcagcataggagcgcagaatggggaagtg
aaaaccaggagagccctgaatgagcgagacacaaacaagcagaggctggtgattctggtc
agagacaacggtcttcctccccagaccagcacggcgttgcttaatgtccttcttgtggat
ggcttttcggatcccttcctgaggagggtggaggtcagtgtgcaagaaccggaagaagat
aaaaccttgaccaagtatctggtgatctgcttggctgctgtctcctttgtgttcctggtc
tgtattgttgtgtttattgtggtcaaaatcctcaagaaggacccccaaagccattttagt
gcagctgttcctcacttcccacctgccagtgctgatgccccagagaactgtgcagattca
cagaatgggtcactttccaggacttaccgttatgatgtttgtttgaccggtggatcctta
agtagcgagttccgatttctcaggcccctctttcctgtcttttcggtgggagacgtaaac
gtcccagggaaccacaagtcctcttcttccacccaatatatccctaagcaggatgcagat
gagcgcttaaatgaacagagctctatgctcactttgttcctgtttaacttttacctgaga
tcactggacaacgtcattaagcctggtgccaaagccgatgaagactatgagacacgaggt
gcaggaatgatttccctttattga
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