Crotalus tigris (Tiger rattlesnake): 120300281
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Entry
120300281 CDS
T08476
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120300281
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120300281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120300281
NCBI-ProteinID:
XP_039182033
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MGSDSWVSILHSSEPGSMERGCIKRQVLAFSLCLNILCLEMCASLRYSVAEEKKTGFLVA
NMLKDLKIDVKELSARKAKLVPKGSKEYFQLDPHSGNLILKDTIDREVLCGQNDPCILFS
EIVLENPLLLHGIEVEVEDVNDNIPKFSKTEFLFEISEHIPTKTRFPLERAEDLDKGEND
VQNYILAPNEHFKLEVQTYTDGSKYAELVLEKALDRETIPQIILILQAVDGGIPRRTGTV
QIIIDVLDANDNVPHFEQSVYKVQLVENSPPGLLVTKVAASDGDKDAYAHITYTFSQVPG
NVLRSFKLNNLTGEITLVGKIDYEENSKYELNIKATDGGGLSAYCKVQVDIEDENDNVPE
ITLSSVTNPIPEDSSPGIVVALFGVRDQDSGDNGRTTCNTDKKLPFILKLTENNYYQLVT
QQPLDREQMSQYNITITATDQGSPRLTSMTVISIQLSDVNDNPPMFERSFYDLHLRENNI
PGLLIGSVHAVDVDTEQNAKLTYWLLPGKIRDVPASSYISISSETGNLYAIRSVDYEDIQ
DFQVMVRAVDKGSPPLSSETMVRVLIRDENDNAPFILCPLQNSTSPSKELVPRGAETGYL
VTKVVATDRDSGQNSWLSYQLLKATDPSLFAVGTQNGKVKTTRPVNIRDTFKHTLIVAVR
DNGHPPQSVSATLKILLVDGFSDPYMKIMDNPKSEVPQEEDHTLTMYLIICLVAISSIFL
LSVMVFIATKFQKRRKFIGSSHSASNFPVGHNLQENCGDRTSDTYCQAYNYEVCLAGGSL
NSEFRFLRPIFPIFSMDPKNSTDSQATKTHVKEDERMSQHVVEKQTYTNSLILVSAIIQM
VSHN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgattcctgggtttccattctgcattcaagtgaacctggatcaatggaaaga
ggttgcattaaaaggcaagttttggctttttctctctgcctaaatattctctgtctagaa
atgtgtgcgtctttgcgctattcagtggctgaagaaaagaaaactgggtttctagtagct
aacatgctgaaagacttaaaaatagatgtaaaggaattatctgctaggaaagccaagcta
gttccaaagggctctaaagagtattttcagctagatcctcattctgggaatctaatatta
aaggatacaattgaccgagaggttctgtgtggccagaatgacccctgtattctattctct
gaaattgtgctagaaaatccattactgctacatggaattgaagtagaagtagaagatgtg
aatgataacattcccaaattctctaaaactgagtttctttttgaaatatctgagcacatt
ccaacaaagaccagattccctttggaaagggctgaagatttagacaaaggagaaaatgat
gttcagaattatatacttgctcctaatgaacactttaaactagaagtgcaaacttacact
gatggtagcaaatatgcagaactggttttagagaaagcattagaccgtgagacgattcct
cagattatcctaattctacaagcagtggatggagggatcccaaggagaactggtacagtg
caaataataattgatgttttagatgcaaatgataatgttcctcattttgaacaatctgtg
tacaaagtgcagcttgtggaaaacagcccaccaggtttattggtcacaaaagttgcagcc
agtgatggtgataaagatgcttatgctcacattacttacacttttagccaagtaccagga
aatgtgctcagatcattcaagttaaacaatcttactggagaaattactcttgtagggaaa
attgattatgaagaaaatagcaagtatgaactgaatatcaaagccacagatggaggggga
ctgtctgcttactgcaaagtccaggtggatattgaggatgagaatgacaatgttccagaa
ataaccctatcatctgtcactaatcccataccagaagattcttccccaggaatagtggtg
gccctctttggtgtaagagatcaagactctggagacaatggcagaactacctgcaatact
gataaaaaactgccttttatattaaaactgactgagaacaattattaccagcttgtgact
caacagccactggacagagaacaaatgtcacaatataacatcaccatcacagccactgac
caaggttctcccagactcacttcaatgacagttattagcattcaactttcagacgtcaat
gataaccctccaatgtttgaaagatctttctacgatttgcacttgagagaaaacaacatt
ccaggactgctcattggatcagtccacgctgtggatgtggacacagaacaaaatgccaaa
ctgacgtattggcttttgcctgggaaaatcagggatgtccccgcatcgtcttacatctcc
atcagctccgaaaccgggaacttgtatgccatccgatctgtagattatgaggatatacaa
gatttccaggtgatggtgagggctgtagacaagggctcgcctccactgagctcagaaacc
atggtccgagttcttatcagagatgagaatgacaacgcccccttcatcctctgccccctt
cagaacagcacttctccatcaaaggagctggttcccaggggagcagagacaggctacctg
gtcaccaaagtggtggcaacggacagggactcagggcagaattcttggctttcctatcaa
ttgctgaaggccacagatccgagtctcttcgctgttgggactcagaatgggaaagtgaaa
accacgaggccggtgaacatccgagacactttcaaacacactcttattgtggcagttagg
gataacgggcatccgcctcagtctgtctctgcgaccctaaaaattcttttagtggacggc
ttctctgatccatacatgaaaattatggataatcctaagagtgaagtcccgcaggaggaa
gatcatactctaaccatgtatttgattatctgcttggttgccatctcatccatttttctg
ctttctgtcatggtgtttattgccaccaagtttcagaagcgaaggaaattcataggaagt
tctcattctgcatctaatttccccgtgggacacaatttgcaagaaaactgtggagatcgt
acttctgacacatattgccaggcctacaattatgaagtatgtttagctggtgggtcttta
aatagtgagttcagatttctcaggccaatattccctattttttcaatggatccaaagaat
tcaacagactctcaggctaccaaaactcatgtcaaggaagatgaacggatgtcccagcat
gtggtggaaaaacagacttatacaaactcactgatccttgtaagtgccatcattcaaatg
gtgtcacacaactga
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