Crotalus tigris (Tiger rattlesnake): 120300295
Help
Entry
120300295 CDS
T08476
Name
(RefSeq) protocadherin beta-16-like isoform X1
KO
K16494
protocadherin beta
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120300295
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120300295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
He_PIG
Syndecan
Motif
Other DBs
NCBI-GeneID:
120300295
NCBI-ProteinID:
XP_039182051
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MENCFWKRQGLYVLLSFSFLRVMCASIRFSVPEEKKKGFLVANVLKELKLEAGELSTRKA
HLVAEGTQEYFHLDIQTGNLLIKDNIDREALCGQNDPCVLLSQFVLENPLDIFNIEIKIE
DVNDNAPKFWKNNVEIDIPENIPISMIFPLELAQDDDLGDNSIQNYILSPNEHFQLEVHK
NEDKTDNIYLVLKKPLDREEMPHLGLTLMAIDGGVPKKTGTVQIKINVLDNNDNFPLFSK
SEYKARIKENLPQGTLVVKVEATDLDLGSNALILYSFHQVPERINNLFNLNERTGEITVW
GQIDYEKEKSYSMNIRATDGGGLPDHCKLLIEVEDVNDNPPEVSIISLTSFLKEDSPPDT
VVAVFNIRDQDSGDNSKMVCSVEMNLPFVLKSTANNFYQLVLQSPLDRETVTEYNITITA
IDCGSPRLTSTRLINVQISDVNDNPPLFEKSSFDMQIRENHIPGLLIGSVHAVDLDTKQN
AKVTYSVLPGKGGGLLPTLISINSETGNLYALRSLDYEQIRGFRVTVRASDGGSPSLSSE
VIVRIHIIDENDNAPFFLYPLQNNTSPCNELVPKSAETGYLVSKVVAVDADSGQNSWLSY
ELLKATDPALFSIGAQNGEVKTRRALNERDTNKQRLVILVRDNGLPPQTSTALLNVLLVD
GFSDPFLRRVDVSVQEPEEDKTLTKYLVICLAAVSFVFLVCIVVFIVVKILKKDPQSHFT
AAVPHFPPASADAPENCADSQNGSLSRTYRYDVCLTGGSLSSEFRFLRPLFPVLSCPVGD
VNIPGNHWTSSGPEDLSKEVAINGRTKEVLMSADWSVISWICFFPLY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagaattgcttttggaaaagacaaggtctgtatgtccttctctctttctcattcctt
agagtaatgtgtgcttcaattcgcttttctgtccctgaagaaaagaaaaaagggtttctg
gtggctaatgtgctcaaggaattgaaactggaagcaggggagctctcaacccgcaaagca
catttagttgctgagggcactcaggaatacttccaccttgatattcagactgggaatctg
ttgattaaggataacatagacagagaagctttatgtggccagaatgatccttgtgtactt
ctatctcagtttgttctggaaaaccccttagatatctttaatattgaaatcaagatagaa
gatgtgaatgacaatgcccccaaattttggaaaaacaatgtggagatagacattcctgaa
aatattcctataagtatgatatttcccttggaattagcccaggatgatgacttaggagat
aatagcatccaaaattatattctcagtcccaatgagcattttcagcttgaagtacacaag
aacgaagacaaaactgataatatatatcttgttttgaagaaaccattagatagggaggag
atgccacaccttggattgactctaatggctattgatggaggagttccaaagaaaacaggc
acagttcaaattaaaattaatgttctggataataatgataactttcctctgtttagcaag
tctgaatataaggcaagaataaaggagaatctgcctcagggcactcttgtggttaaggtg
gaagccacagatctggatttgggttcaaatgcactgatcctctactcattccatcaagta
ccggaaagaataaacaatttgttcaatttaaatgagagaacaggagaaatcacggtttgg
ggtcagattgactatgaaaaagaaaaaagttacagcatgaatatcagagcaacagatgga
gggggtctcccggatcactgcaaattactaatagaggttgaagatgtgaatgacaacccc
ccagaagtgtccatcatatctctgaccagctttttaaaagaggactctcccccagacaca
gtggtggctgtcttcaatattagagatcaagactctggagacaacagcaaaatggtctgc
tccgtggagatgaaccttccttttgtgctcaaaagcaccgcaaacaacttttatcagctt
gtgctccaaagtcccctagacagagagacagtcactgagtacaacattaccatcacagcc
attgactgtggctctcctaggcttacttcaacaaggctgattaatgttcagatctccgat
gtcaatgataaccctcctctttttgaaaagtcttcatttgacatgcagatccgggagaat
catattccaggcttgctcatcggctcagtccacgctgtggatctggacacaaagcagaat
gcaaaagtaacttactcagttctgcctgggaagggtggtggccttttgcccactctcatt
tcgatcaactctgaaactggaaacctgtatgccctccgatccctggactatgagcagatc
agaggcttcagagttactgtgagggcctctgatggtggttctccttccctgagctcagaa
gtgattgtccgcatccacatcatagatgaaaacgacaacgctcccttcttcctgtatccc
ctccagaacaacacatccccatgcaatgagctggttcccaagtcagccgagaccggctat
ctggtcagcaaggtggttgcagtggatgcagattctggccaaaactcttggctttcctat
gaattgctgaaggccacggacccagcccttttcagcataggagcgcagaatggggaagtg
aaaaccaggagagccctgaatgagcgagacacaaacaagcagaggctggtgattctggtc
agagacaacggtcttcctccccagaccagcacggcgttgcttaatgtccttcttgtggat
ggcttttcggatcccttcctgaggagggtggatgtcagtgtgcaagaaccggaagaagat
aaaaccttgaccaagtatttggtgatctgcttggctgctgtctcctttgtgttcctggtc
tgtattgttgtgtttattgtggtcaaaatcctcaagaaggacccccaaagccattttact
gcagctgttcctcacttcccacccgccagtgctgatgccccagagaactgtgcagattca
cagaatgggtcgctttccaggacttaccgttatgatgtttgtttgactggtggatcctta
agtagtgaattccgatttctcaggcctctctttcctgtgctgtcctgtcctgtcggagat
gttaatatcccaggcaaccactggacttcttctggccccgaagatttatctaaggaggtt
gcaattaatgggagaacgaaagaggtattgatgtcagctgactggtctgtaatttcctgg
atctgttttttccccctttattga
DBGET
integrated database retrieval system
