Crotalus tigris (Tiger rattlesnake): 120300297
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Entry
120300297 CDS
T08476
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120300297
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120300297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Syndecan
He_PIG
Motif
Other DBs
NCBI-GeneID:
120300297
NCBI-ProteinID:
XP_039182053
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MCTSIRFSVPEEKKKGFLVANVLKELKLEAGELSARKAHLAAEGIQEYFHLDIQTGNLLI
NDNIDRETLCGQNDPCVLLSQLVLGNPLDIFNIEIKIEDVNDNAPKFWKNNVEIDILETV
PKSTTFPLEPAQDEDLGENSIQNYTLNPNEHFQLEVHKNEDRKDNVYLVLKKTLDRERMA
HLGLTLMAIDGGVPKKTGTVQININVLDSNDNFPLFSKSEYKARIKENLPKGTLVIKVEA
ADLDLGSNAQILYSFHQVLERINNLFYLNERTGEITVLSQIDYEKEKSYSMNIRATDGGG
LSGHCNVLIEIEDVNDNPPEVSIISLTNTLKEDSPPDTVVAIFSVRDQDSGDNSKTVCSL
EMNLPFVLKGTTNNFYQLVLQSPLDRETVTEYNITITAIDCGSPRLTSTRLINVQISDVN
DNSPLFEKSSFDMQIRENNIPGLLIGSVHAVDLDTKQNAKVTYSVLPGKGDGLLPTFISI
NSDTGNLYALRSLDYEQIRGFRVTVRASDGGSPSLSSEVIVRIHIIDENDNAPFFLYPLQ
NNTSPCNELVPKSAEAGYLVTKVVAVDADSGQNSWLSYELLKATDPALFSIGAQNGEVKT
RRALNERDTNKQRLVILVRDNGLPPQTSTALLNVLLVDGFSDPFLRRVDVSVQEPEEDKT
LTKYLVICLAAVSFVFLVCIVVFIVVKIFKKDPQSHFTTAVPHFPPASADAPENCADSQN
GSLSRTYRYDVCLTGGSLSSEFRFLRPLFPVFSVGDVNVPGNHWTSSGPEDLSKQVVVNG
TTKEVLFEIKKEVLVKYSFSQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacttcaattcgcttttctgtccctgaagaaaagaaaaaggggtttctggtggct
aatgtactgaaggaattgaaactggaagcaggggagctctcagcccgcaaagcacattta
gctgctgagggcattcaggaatacttccaccttgatattcagactgggaatctgttgatt
aatgataacatagacagagaaactttatgtggccagaatgatccttgtgtacttctatct
cagcttgttttgggaaaccccttagatatctttaatattgaaatcaagatagaagatgtg
aatgacaatgcccccaaattttggaaaaacaatgtggagatagacattcttgagactgtt
cctaaaagtacaacattccccttggaacctgcccaagatgaagacttgggagagaatagc
atccaaaattatactcttaatcccaatgagcattttcagcttgaagtacacaagaatgaa
gatagaaaagacaatgtatatcttgttttgaagaaaacattagatagggagaggatggca
catcttggattgactctaatggctattgatggaggagttccaaagaaaacaggcacagtt
caaattaacattaatgtgctggatagtaatgataactttcctctgtttagcaagtctgaa
tataaggcaagaataaaagaaaatctccctaaaggcactcttgtgattaaagtggaagcc
gcagatctggatttgggttcaaatgcacagatactctactcattccatcaagtgctggaa
agaataaacaatttgttctatttaaatgaaagaacaggagaaatcacagttttgagtcag
attgactatgaaaaagaaaagagttacagtatgaacatcagagcaacagatggagggggt
ctttcagggcactgcaacgtactgatagaaattgaagatgtgaatgacaaccccccagaa
gtgtccatcatatctctgaccaacactttaaaggaagactctcccccagacacagtggtg
gccatcttcagtgttagagaccaagactctggagacaacagcaaaacagtctgctccctg
gagatgaaccttccttttgtgctcaaaggcaccacaaataacttttatcagcttgtgctc
caaagtcccctagacagagagacggtcactgagtacaacatcaccatcacagccattgac
tgtggctctcctaggctcacttcaacaagactgattaatgttcagatctccgatgtcaat
gataactctcctctttttgaaaagtcttcatttgacatgcagatccgggagaataatatt
ccaggtttgctcattggctcagtccacgctgtggatctggacacgaagcagaatgcaaaa
gtgacttactcagttctgcctgggaagggtgatggccttttgcccactttcatttcaatc
aactctgatactggaaacctgtatgccctccgatccctggactatgagcagataagaggc
ttcagagttactgtgagggcctctgatggtggttctccttccctgagctcagaagtgatt
gtccgcatccacatcatagatgagaacgacaatgctcccttcttcctgtatcccctccag
aacaacacatccccatgcaatgagctggttcccaagtcagccgaggccggctatctggtc
accaaggtggttgcagtggatgcagattctggccaaaactcttggctttcctatgaattg
ctgaaggccacggacccagcccttttcagcataggagcgcagaatggggaagtgaaaacc
aggagagccctgaatgagcgagacacaaacaagcagaggctggtgattctggtcagagac
aacggtcttcctccccagaccagcacggcgttgcttaatgtccttcttgtggatggcttt
tcggatcccttcctgaggagggtggatgtcagtgtgcaagaaccggaagaagataaaacc
ttgaccaagtatttggtgatctgcttggctgctgtctcctttgtgttcctggtctgtatt
gttgtgtttattgtggtcaaaatcttcaagaaggacccccaaagccattttactacagct
gttcctcacttcccacccgccagtgctgatgccccagagaactgtgcagattcacagaat
gggtcactttccaggacttaccgttatgatgtttgtttgactggtggttctttaagtagc
gagttccgatttctcaggcctctctttcctgtattttctgtgggagatgtaaacgtccca
ggcaaccactggacttcttctggccctgaagatttatctaagcaggttgtagttaatggc
acaacgaaagaggtactgtttgaaataaaaaaagaagttttggtaaagtattcattttca
cagtag
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