Crotalus tigris (Tiger rattlesnake): 120300364
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Entry
120300364 CDS
T08476
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04512
ECM-receptor interaction
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120300364 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120300364 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120300364 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctig04147
]
120300364 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120300364 (COL6A3)
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120300364 (COL6A3)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120300364 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
120300364 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
120300364
NCBI-ProteinID:
XP_039182222
LinkDB
All DBs
Position
Unknown
AA seq
2750 aa
AA seq
DB search
MKKYHYLIFATICCLLLSGNHEADAQQKETTQESADIIFLIDGSKNGAVTFSAIRDFIAN
LIERLSVGAELIRIGVVMFSDEPRTVFSLNSYTQKVDILEAVKALSILGGEEANIGDALD
FVMQNHFTHSGGSRIEEGVPQILVLISSIESSDDIREGVLAMKQASIFSFCIGVQNADNA
ELQQIATDASFIFTALDTRNLGELQELLLPNIVGVAQRLILLDAPTILTEVVEVNKRDIV
FLIDGSTALGSAPFNAIRDFVAKIINRMEIGPDLIQVAVAQYADSVRPEFYFNSFQTKKD
IVTNVRKIKPMGGTTLNTGSALRFVKDNFFTSAAGARIDEGVLPMLILITGGVSRDDVVQ
PTQEIKKNGIVVLAVGARNADRTELEKIAYEPSLVFTPTEFRTVALTVIIPDVLSSIRSL
PIKILETPSREVVIKRDIVFLLDGSVNVGNTNFPYVRDFLVNLVNSLDVGIDDVRIGLVQ
FSENPKTEFFLNSFLTKADVLSRLRQLRLQGGSILNSGAALDFVHSNHFTETGGSRKDEN
VPQVLVFLAAGPSADAFQDAANALTRARVLTFCVGVRNAKLAELQQIAFNPQTVYFKDEF
SSLPALPQEMISSLTTYISGDVEEITITLTENKMDILFLIDGSMNVAGQFPAIREFVFQI
ISDLTVRPDVVRVSVAQFSDNVNVEFNFDVPSKIEILQKVRKMRMKGGRLLNIGAALDYA
IKNIFVRHAGSRIEEDVPQFLVLLVAGRSDDIVDKSADTLKQIDVITFVIQTKTSDPVEL
ERIVYAPQFILKADTLSQIGDIQPEIVNLLKTIELKPQADTKKDVVFLIDGSQFAISEFP
SICEFIERLVNNMNVGSDATRVAVIQFSDNPKVEFLLNEHSTKEEVLAAVRRLSPRGGRQ
VNLGSALEYVSKNIFTRPSGSRIEEGAPQFLILLYSHQSHDDTENPVHLIKQIGVAPLPI
GKNVDPEELIKIALGPDYIFQVSTYQDLPSLEQKILTPLTTLTTQQIQKIIADTSRPPDI
DSEAKDIIFLVDSSDDVRPDGLAHIRDFIYRIVQQLDIQPSRVRIAVVQFSNEVFPEFDL
KAYLTKESVLQAIRRLRHKGGTPLNVGKALDHVVKTLFIRSAGSRREDGVSQHLVLLLGG
RSQDDIIRPSILVQNSGISTLGIGTRQVDSAELQRITSNPKTAFIVRDFTEIPAIEKRVL
ATLKAQPEPTELPTDVIAVDKKQGDIVFLLDSSINFGRDNFPNVVEFIHDLIDAIYDEGD
SIRVGLVQYNSDVSDEFFLKDFSDKEHILEAVKKIAYKGGRIANTGAGVKHIQVKHFVKE
AGSRKDQNVPQIAVIVTAGKPEDDGEAAVLGLSQSGVKVFAVGVKNIDLNEITKLSSDST
TAFRASTPQVLSELNEAVLVTLNDVMREQLCRGVVEVSRDCNLDVIFGFDVSDTVQGQNI
FSVQRMLESTVEDILNRISQMQKISCTPNQAPTVRVAFLAQTPSGVVEAFDFSEYQPELF
EKFQALRNDGPYVFTADTLKSYQDKFKTAPTGSTKVVIHLTDGIDGAMGPLAAASANLKK
EGVKALILVGLERVSSFEEAMKLEFGRGFTYNRPLQVNQLDLDFEVAEQLDNIAERSCCA
VPCKCSGQRGDRGFPGTVGPKGIPGENGYRGYPGDEGGLGERGPPGINGTQGFQGCPGER
GMKGGRGFPGEKGELGENGLDGIDGEEGERGFPGVPGERGSPGRQGGRGSKGEIGDPGDH
GLRGNPGSVGTDSSDRGLKGEKGELGSAGEPGRNGPRGDAGGAGRDGALGRRGPPGIKGN
KGALGSLGFNGEQGIKGPQGPPGTTGIPGLQGELGLPGQRGAGGPVGVVGERGRSGPLGK
KGDAGEPGPKGPIGPPGPRGETGDDGRDGVGKEGPKGRTGQPGFPGYPGPRGVPGDHGDD
GKPGPKGSSGERGHSGEPGQRGQKGESGYPGPLGFMGSKGESRDHCTLVRNIKDKCPCCY
GPKECPVYPTELAFALDTAAGGNADTFNRMKDTIVSIVNNITIAESNCPRGARIALVTYN
SEVTTEIRFADSRNKKDLVKRIKDLQFVQTSKQRSLETAMGFVARNTFKRARSGFLMRKV
AVFFTNGPTKASPKLNEAVLRLYIAGVLPVFLTNREDRVLIDALQINNTGGQAFAFTGGA
GQLAATLRKVFTCHICLDVCDPDPSCGIQRGSFGRDRRAAPTDVDIDIAFIVDSSESTTP
MQFKEIKSYISYIVNQLETSSDPKVSRHHARVAVVQHAPFEFQSNSSISPVKVELSLTDY
GPRDKLTDFIQNQISQLYGTRAVATAVDYTMRHIFESAPNPRDHKVIVLMMTGSIEKEEL
EHLQKIIVEAKCKGYFFVIIGVGRNINIPSIYSLASEPNDVFFKYADKASELHEEPLLHF
GSLLPSFINSENAFYLSPDIRKKCDLFQGDQPIKKNGQKQLNIPNNVTVTPAVPEKTEVI
KHNGDVQITDITENSAKLHWMIPELQKVYVYDIIVTSAHDHSLVVKLNLTSNERVIGGLQ
SGQKYHVAITGYHNAQAKATYKGIFNTKSMPAVKGPSAAAAATNVMVNTEPLEVLEKDPC
LLDLDMGMQCKEYQVKWFFDYKNKICTQIWYGGCGGNANRFETEADCISRCVKPSDEKDM
QLPVLEKSHLSGQKVHMKNLSRRKFPRRKLRSRAKKVAREVTDICQLKKEDGPCRNFVLK
WYFDPETASCARFWYGSCGGNENRFNTQKDCEKVCVSGHIKSGVVTMIGT
NT seq
8253 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtatcactatttgatttttgcaacaatctgttgtcttttactctcaggcaat
catgaggctgatgcacagcagaaagaaactacacaagaatctgctgacattattttcctt
attgatggatcaaagaacggcgctgtcactttctcagccattcgtgatttcattgcaaat
ttaattgaaagactctcagttggagctgagctcatacgcattggggtggttatgtttagt
gatgaacccagaactgtattctccttgaacagctacacccaaaaagttgatattctagag
gcagtgaaggcccttagtattcttggtggcgaggaagctaatattggagacgctcttgat
tttgtcatgcaaaaccacttcacccactcaggaggcagcagaatagaggaaggtgtgcca
cagattttagtgctcataagtagcattgagtctagtgatgacataagagaaggagtttta
gccatgaagcaagctagtatattctcattttgcattggggtccaaaatgctgacaatgca
gagcttcagcaaatagctactgatgcaagcttcatatttactgccctggatacacgtaac
cttggtgaacttcaagaactcttactgccaaacattgttggagtggcccaaagactcatt
ttgttagatgccccaactattcttacagaagttgttgaagtcaataagagagacatagtc
ttcctgatagatggttctactgcattgggatctgccccctttaatgcaattcgtgatttc
gtggccaaaatcatcaacagaatggaaattggaccagatctcattcaagttgcagtggca
caatatgcagattctgtaagaccagaattttattttaatagcttccagacgaaaaaagac
attgtcaccaatgttaggaaaataaaaccaatgggtggtactacacttaatacaggctcg
gcattgcggtttgttaaagacaacttcttcaccagcgctgctggagccaggattgatgaa
ggtgtccttcctatgttgattctgatcactgggggtgtgtccagagatgatgttgtccaa
ccaacgcaagaaattaaaaagaatggcatcgtggtccttgctgtgggagcccgaaatgct
gaccgtaccgaacttgaaaaaattgcctacgaaccaagcctggttttcacccccacagaa
ttccgcacagttgcactaacagtcatcattcctgatgttttgtcatctataaggtcactc
cctataaaaattttggaaacaccatcaagagaagttgtaatcaaaagagatatcgtcttt
cttttggatggatcagtcaacgttggaaatactaacttcccatatgtccgtgactttctt
gtgaacctagttaattcccttgatgttggaattgatgatgtacgaatcggcctagtgcaa
tttagtgagaaccccaaaacagaattctttttaaactccttcctaaccaaggcagatgtc
ctttctcgtctgaggcagttgagactgcaaggggggtcaattctgaattcaggagctgca
ctagattttgtgcattccaatcacttcactgaaacaggtgggagcaggaaagatgagaat
gtccctcaagtgctagtcttccttgcggcagggccatctgctgatgccttccaagatgct
gccaatgccttaactcgtgcgagagtgctcaccttttgtgttggggttaggaatgccaaa
ctggcagaacttcagcagatcgcatttaatccacaaacagtatattttaaggatgaattc
agctctctgccagctttaccacaggaaatgattagttcactaacaacatacattagtgga
gatgtggaagaaattacgatcacattaacagaaaacaagatggatattttgtttttgatt
gatggctcaatgaacgtggctggccagtttcctgctattcgagagtttgtgttccaaatt
atttctgacctgactgtgcggccagatgttgtacgagtatctgtagcacaatttagtgac
aatgtaaatgtggagttcaactttgatgtcccatccaagatagaaatccttcagaaagta
agaaagatgaggatgaaaggaggaaggctactgaacattggagctgcactagattatgcc
ataaaaaacatctttgtgagacatgctgggagcaggattgaagaagacgtgccacaattc
ctcgttcttcttgtggctgggagatcagatgacattgtggacaaaagtgctgataccctg
aaacaaattgatgtgattacttttgttatccaaaccaaaacctctgatccggttgaatta
gaaaggatagtttatgctcctcagttcattctaaaagctgataccctttctcaaattgga
gacatacaacccgaaatagttaatctattgaaaaccatagaacttaaacctcaagcagat
acaaagaaagacgttgttttccttattgatggctctcagtttgcaatttctgagttccct
tcaatttgtgaatttatcgaacggcttgtaaacaatatgaatgtgggttcagatgctact
cgagtagctgtaattcagttcagtgataatcccaaagttgaatttttactgaatgaacat
tctaccaaggaggaggtgctggctgccgtgagaagactaagtcccagaggagggaggcaa
gtgaaccttggttctgccctagaatatgtgtcaaagaatatctttacaaggccttctggg
agccgcatagaggaaggagcacctcagtttttaatccttctttattcccaccaatctcat
gatgatacagagaacccagtacacctgatcaaacagattggtgtggctccacttcctatt
ggaaagaatgtggatcctgaggaactgatcaaaatagcacttggtcctgattatatattt
caagtgtcaacttaccaagatctacctagtctggaacagaaaatattaacccctcttaca
acattaactacccagcagatacaaaaaatcattgctgatacaagtcgccctccagacatt
gatagtgaagcaaaggacatcatcttccttgtcgacagctctgatgatgtcagaccagat
ggacttgctcacattcgtgatttcatttaccggattgtccagcaactagatatccaacca
agcagagtgagaattgctgttgtccagtttagcaatgaagtgtttccagagttcgactta
aaagcctacctgaccaaagagagtgtgctacaagccatacggcgcttaagacacaaaggt
ggtactcccctgaatgttgggaaagctctggaccatgtcgtgaagactctctttatcaga
tcagcagggagtaggcgagaagacggagtctcccagcatttagtcctcttgcttggaggg
agatcccaggatgatatcatcaggccttccattctggtgcagaactctgggattagtact
ctaggaattggaacaagacaagtagacagtgcggaattgcaaaggatcaccagcaatccc
aaaactgcatttattgtgagagattttactgagatcccagcaatagaaaagcgtgtcctt
gcaacacttaaggcacaaccagagccaactgaactgcctactgatgttatcgctgttgat
aaaaaacaaggtgacattgtcttcttgctggatagctctattaattttgggagagacaat
ttccccaatgttgttgaatttatacatgacttaattgatgctatttatgatgaaggtgat
tccattcgagttggcttagtgcaatacaactctgatgtgagtgatgaattctttctgaag
gatttctctgacaaagaacatatcttagaagcagtgaagaagatagcctacaaaggaggc
agaattgccaatacaggagcaggtgtcaagcatatccaagtaaaacattttgtgaaggaa
gctggcagcaggaaagaccagaatgtccctcagattgctgtcattgtaacagcaggaaag
ccagaagatgatggggaggcagcagtcttagggctgtctcagtcgggtgtcaaggtcttt
gcagttggtgtgaaaaacattgacctgaatgaaattacgaagctctccagtgacagcaca
acagcctttagggcttcaacgccccaggtcctctcagagctcaatgaggctgttctggtg
accctgaatgatgtcatgagagaacaattatgtcgtggtgtggtagaagtctccagagat
tgcaatttggatgttatatttggatttgatgtctcagatacggtacaagggcaaaacata
ttcagtgtacaaagaatgctggaatcaacagtggaagatattctgaacaggatcagtcaa
atgcagaaaattagctgcactcccaatcaggcacccacagtgcgtgtggcattcctggca
cagactccctctggagttgtagaagcctttgatttctcagagtatcagcctgagttgttt
gaaaaatttcaggccttgcgaaatgatggaccatatgtgttcacagcagacactctcaag
tcttaccaggataaatttaaaacagctcctactggaagtacaaaggtggtgattcactta
actgatggtattgatggtgctatgggaccgctggcagctgcatcagctaatctaaagaaa
gaaggtgtcaaggctcttattcttgttgggttggagcgagtatctagttttgaagaagca
atgaaactggaatttgggcgtggctttacttataataggcctctccaagtgaatcagctg
gatttagattttgaagtggcagagcaattggacaacattgcagaaagatcatgttgtgca
gtcccatgcaaatgttctggacaacggggagacagaggatttccagggacagttggacca
aagggaattccaggggaaaatggctatagaggctatccaggagatgaaggtggactgggt
gaacgtggaccccctgggataaatggaacccaaggtttccaaggctgcccaggtgaaagg
ggaatgaaggggggccgtggattcccaggagaaaagggtgaattaggggagaatgggctt
gatggaatagatggagaagagggagagagaggctttccaggtgttcctggggagaggggg
agccctggtagacagggcggcagaggaagcaaaggagaaataggagacccaggtgaccat
ggacttcgaggcaatccgggttctgttggaacggatagcagtgacagaggactcaaaggc
gaaaagggagaacttggatcagcgggagaacctggaagaaacggaccacgaggtgatgca
ggaggagctggaagagatggagcacttggcagaagaggaccaccagggatcaaaggaaat
aaaggtgcccttggctcactaggatttaatggggaacaaggaattaaaggtccccaggga
ccacctggcacaactggaatccctggccttcaaggagagcttggcctccctggtcagagg
ggtgctggtggcccagttggagttgttggggagcgtggtaggtctggtcctcttggtaaa
aagggtgacgctggtgagcctggtccaaagggacccattgggcctcctgggccccgagga
gaaacgggagatgatggacgagatggggttggcaaggaaggccctaaaggcagaacggga
caacccggtttcccaggatacccaggaccacggggtgtacctggagatcatggtgatgat
ggtaaacctggccccaaaggaagcagcggtgaacggggacattcaggggaacctggccaa
agaggtcagaaaggagagagtggatatccaggaccacttggatttatgggcagcaaagga
gagtctagagatcactgcacacttgtacgcaacatcaaagataaatgtccttgctgttat
ggtccaaaagaatgtcctgtttatccaactgaattagcctttgctcttgatactgccgct
ggtggaaatgcagacactttcaacagaatgaaagacacaatagtgtcaattgttaacaat
atcacaattgcagaaagcaattgccccagaggtgcccgaatagcactggttacatacaac
agtgaagttaccactgaaatacgttttgctgactccagaaacaagaaggatttagtaaaa
cgaattaaggatctccaatttgttcagacatccaagcaacgtagtttagaaacagccatg
ggatttgtggccaggaatactttcaagcgtgcacgtagtggcttccttatgaggaaggtg
gctgtgttcttcaccaatgggccaacaaaagcatctccaaagttgaatgaagcagtacta
agactgtacattgctggagttctgcctgtattccttacaaacagagaggacagggtcctt
atcgacgcattacagataaacaacactggtggacaggctttcgcatttactggtggcgct
ggtcaactggctgcaactttaaggaaagtgttcacgtgccatatttgtctagatgtatgt
gatcctgatcccagctgtggtatccagaggggtagctttggcagagacagaagggcagct
cctacagatgttgacattgatatagcattcatcgtggatagttctgagagtaccactcca
atgcagttcaaagaaattaaaagctacatttcatatatagtaaaccaactggaaactagt
tctgatcccaaggtatctcggcatcatgccagggttgctgttgtccagcatgctcccttt
gagtttcaatccaactcaagcatatctcctgtcaaagttgaattgtcactcacagattat
ggacctagggacaaattaacagatttcattcagaatcaaatttcacaactttatggaaca
cgggctgtggcaacagcagtagactatacaatgaggcatatttttgaaagtgcaccaaat
cctagagatcacaaagtcattgttttgatgatgacaggaagcattgaaaaggaagaactt
gaacaccttcagaaaattattgtagaagctaaatgtaaaggatatttttttgtaattatt
ggcgttggtaggaatattaatattccaagtatctacagcttggcaagtgagcctaatgat
gtcttcttcaaatatgctgataaggcatcagaacttcatgaagaaccattgctacatttt
ggaagcctcttgccatccttcatcaacagtgaaaatgccttttacttgtctccagatatc
aggaaaaaatgtgatttgttccagggtgaccagccaatcaaaaaaaatggccaaaaacaa
ctaaatattccaaataatgttactgtcacacctgctgtaccagaaaaaacagaagtgatt
aaacataatggagacgtccagataactgatatcactgaaaatagtgctaagctgcattgg
atgattcctgagcttcagaaagtctatgtctatgacatcatagtcacctcagcacatgac
cactctttagttgtgaagcttaatttaactagcaatgaaagagtcattggaggtcttcag
agtggacaaaagtatcatgttgctatcacaggctaccataatgcccaggccaaagctact
tataagggaatatttaatacaaagagcatgcccgcagtcaagggcccttcagcagcagca
gcagcaaccaatgtaatggtgaacactgaacccttggaagtccttgaaaaagatccttgc
ttactggaccttgacatgggcatgcagtgcaaggagtatcaggttaagtggttctttgac
tacaaaaacaagatctgcacccagatttggtatggtgggtgtggcggtaatgccaataga
tttgagacagaagctgactgcattagcagatgtgtgaagccatcagatgagaaagatatg
cagcttcctgtccttgagaaaagtcatttgtcaggacagaaagtgcacatgaagaattta
tccaggaggaaatttccaagaaggaaattaagaagcagagcaaaaaaggtagcaagagaa
gtcacagatatctgtcaattgaagaaagaagatggtccttgcaggaattttgttctaaaa
tggtattttgatccagagactgcaagttgtgctagattctggtatggtagctgtggtgga
aatgaaaatagatttaacacacagaaagactgtgaaaaagtctgtgtttcaggtcacatc
aagtctggtgttgtgacaatgattggaacttaa
DBGET
integrated database retrieval system
