Crotalus tigris (Tiger rattlesnake): 120300380 Help Entry 120300380         CDS       T08476                                  Symbol COL6A1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig04510   Focal adhesion ctig04512   ECM-receptor interaction ctig04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ctig00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120300380 (COL6A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120300380 (COL6A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120300380 (COL6A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ctig04147]     120300380 (COL6A1)    00536 Glycosaminoglycan binding proteins [BR:ctig00536]     120300380 (COL6A1) Exosome [BR:ctig04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    120300380 (COL6A1) Glycosaminoglycan binding proteins [BR:ctig00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120300380 (COL6A1)  Hyaluronan   Extracellular matrix or blood plasma proteins    120300380 (COL6A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 VWA_CoxE DUF1194 Toprim_3 vWA-TerF-like Motif Other DBs NCBI-GeneID:  120300380 NCBI-ProteinID:  XP_039182251 LinkDB All DBs Position Unknown AA seq 1011 aa AA seqDB search MKLACIFLIFLFQDCFLIKRVLAQGSEISNRVIAFQDCPVDLFFVLDTSESVSLRVKPFG KANVDKIKAFTNQFIDKLNDRYYRCDRNLVWNAGALHYSDEVELIKKLTRMPSGRADLKN RVSSVESIGKGTYTDCAIKAGLEELLIGGSHHRENKYLIVVTDGHPLEGYKEPCGGLEDA ANEAKHQGIKVFAVAVSPDHLESRLNVIATDHDYRRNFTATVPQSDIPRTIDTIIEMIKN NVEHVCCSYECQPPRGPPGHIGDPGEEGERGRHGLPGEKGDAGDPGKQGDPGPIGYQGMK GDKGGRGDKGSRGAKGGKGEKGKRGIDGNDGKKGEQGYHGLPGCKGSPGFDGLQGPLGQK GDTGSYGPKGIKGEPGPKGGPGPQGKDGRPGDKGLPGEVGAKGEKGEWGDEGSPGSDGIA GPKGSPGSEGLRGVPGARGLNGEKGELGPPGEQGREGLFGPPGEPGKVGAPGPKGFRGDE GASGPEGPKGQIGPPGITGNPGLMGDRGDDGPPGNGTIGYPGAPGDPGIRGDRGLNGTKG YPGPKGDDGEIGEPGKQITEPGIKGKKGVKGYRGSEGEPGPPGPPGLPGPDECEILDIIM KMCSCCECKCGPIDIIFVLDSSESIGEMNFGIAKDFIIKVIDRLRTEEHVMFSREDSNLA IVQYSHGGTEELVLMKDGDVQGFKEAVKNLHWIAGGTFTGEALDYTKKRLPPYFTHKRVI IVITDGRTDILHDRTPITVLCERDNKVVPVGSSDIFEDPPDSEKLSKISCGGLTFTQPEY IALLDDTFIQNVTSYVCREKQCPDYTCPITFANSADITLLVDSSTSVGAHNFNITKKFVK RLAERFISADKSPGASVRITVVQYSGNTQQKLEVDFQRNYTVIADIVDKMEFINDGTDVV AALNYVTNLFRRSSRPAIKKRVLIFSDGNSQGITENAIERAVQNAQQADIEIYVLAVGTQ VNEPNLRLLVSQKAAQDDIAYRERHLFRIPDYQSLLKGVFYQTVSRKLAII NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt atgaagttagcctgcatcttccttattttcctatttcaggactgttttctaataaagagg gttctcgctcagggatcagaaatatccaacagagtaatagccttccaagattgcccggtg gatttgttttttgtcctggatacctctgagagcgtttccttaagggtaaagccttttggt aaagccaacgttgacaagatcaaagcattcactaatcaattcattgataaattaaatgac aggtactatcggtgtgaccgaaatctagtgtggaatgcaggcgccttacattacagtgat gaggtggaactgatcaagaaacttacccggatgcccagtgggcgagcagacttgaagaac cgtgtgtcctcagtagagtctattgggaaaggcacctatactgactgtgccattaaggca gggcttgaggaactactcattggcggatctcatcatagggaaaataagtatcttattgtg gtgacagatggacatcccttagaaggttacaaagagccctgtggaggactggaagatgct gccaatgaagcaaagcaccaggggatcaaagtgtttgctgttgctgtatctccagaccat ctggaatccagattaaatgtgattgctacagaccatgactatcgccgcaatttcacagca actgtaccacaaagcgatattccaagaacaattgacaccatcattgaaatgattaaaaat aatgtggagcatgtgtgctgttcctatgaatgccagcctcctcgaggacctccagggcac attggggacccaggagaagagggagaaagagggagacatggcttgccaggagaaaaagga gacgctggagatcccggaaagcaaggtgatccaggacctattggctaccaagggatgaag ggagacaagggtggccgaggggacaagggctcaagaggtgcaaaaggaggcaagggagag aagggcaaacgtggcatagatggcaatgatggcaagaagggtgaacaaggatatcatgga ctaccaggatgcaaaggatctcctgggtttgatggcttacaaggacctcttggacaaaaa ggggatactggttcttatggacccaaagggataaagggagagcctgggcccaaaggaggt ccagggccacaaggaaaagatggacgtcctggcgacaagggtctgcctggagaagtggga gccaaaggagaaaaaggagaatggggagatgagggaagtcctggctctgatggtatcgct ggaccaaagggtagccctggatccgaaggcttacgaggtgttcctggggctcgtggacta aacggagaaaagggtgagctaggtccaccaggagaacaaggccgtgagggactttttgga ccaccaggagaaccaggtaaagtaggtgcacctggacctaagggctttagaggagatgaa ggagcttctggaccagagggccctaaagggcagattggaccacctggaataactggaaac cctggcttgatgggtgataggggagatgatggcccaccaggaaacgggaccattggctat cctggtgccccaggagatcccggaatcagaggtgaccgtggacttaatggcaccaaaggc tatcctgggcccaaaggcgatgatggtgaaattggagagcctggtaaacaaataactgaa cctgggatcaaaggcaagaaaggtgtcaaaggttacaggggatcagaaggagaaccagga cctccaggacctccaggactccctgggccagatgaatgtgaaattttagatatcatcatg aaaatgtgttcttgctgtgaatgcaagtgtggtcccattgatattatattcgtattagac agttctgagagtattggagaaatgaattttggtattgcaaaggattttataattaaagtt attgacaggctgcgcacggaagaacatgtaatgttttccagagaagactccaatcttgct attgtgcagtatagtcatggtggaactgaggaattggtgctcatgaaagatggagacgtt caaggtttcaaggaggctgtgaagaaccttcactggattgctggtggcacctttactgga gaggctcttgactacaccaaaaaacgtctgcccccatatttcactcacaaaagagttatc attgtcatcacagatggacggactgacatattacacgatcgaacacccatcactgttctt tgtgaaagagataataaggttgtccctgtgggttccagtgatattttcgaagaccctcca gattctgaaaaattaagtaaaatatcctgtggaggcctcacatttactcaaccagagtat attgccttgctggatgacaccttcattcagaatgttacctcttatgtttgtcgagaaaaa caatgtcctgactatacctgcccaattacttttgctaactcagctgatattacactcctt gtggatagctctaccagtgttggggcccataacttcaatatcaccaagaagtttgtgaaa cgtcttgcagaacgattcatatcagctgacaaaagtccaggggcttctgtgcgcatcact gttgtccagtacagtggcaacacacagcaaaaattggaggtggactttcaacggaactac acagtgatagctgatatagttgacaaaatggaatttataaatgatggcacagatgttgtt gcagccttgaactatgtcaccaacctgtttcggaggtcctctcgtcctgctattaagaag agggtgctgatcttctcagatggcaattctcaaggtatcactgaaaatgccattgagaga gcagtccagaatgctcaacaggcagacattgaaatttatgtacttgctgttggcacacaa gtcaatgagcccaacctacgtctgcttgtctcccaaaaagcagctcaggatgacatagcc tacagagagcgccaccttttcagaatacccgattatcaatctttgctgaaaggtgtattc tatcaaactgtgtccaggaaactagctataatctga

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