Crotalus tigris (Tiger rattlesnake): 120300565
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Entry
120300565 CDS
T08476
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120300565 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120300565 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120300565 (SMARCC2)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120300565 (SMARCC2)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120300565 (SMARCC2)
PBAF complex
120300565 (SMARCC2)
GBAF(ncBAF) complex
120300565 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
120300565
NCBI-ProteinID:
XP_039182696
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDSTRVWLGKNYKKYIQAEPPTNKSLSNLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIYLHPDIDPKLQAKLKDIVKRHQGTITEDKSSASHIAFP
VPGSLEEEEWVRPIMKRDKQVLLHWGYYPDSYDTWIPASEIEAPVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEPEDENMETAGKDEEENNAGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDSDTKTGRKGKEIEDLVTETVKGKPELQTTASQQMLNFPDKSKEKP
PDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDELE
RIGEGGERGAFRASTREVPSLDLAQYAVGTKKGAETQENRAGLASGLELTLNRLAQEESC
TDENRSEPQPSEEKKELKEQREGVLEEETKEKLGEVPRKEDDKSKEADGEKEMDKSDGDT
LADGEKEKEPKEGQEEGPKDLAEAESERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHME
QLKYAEMRARQQHFQQMHQQHQQQQQPPPPPALSVGSQPLPSSGAPLAPTAHSMPISQTP
VPAASTVGQPSSMAQAEQMGQSVSVQPQQSATGAPHTGPSQTGQPSAGSHAQPPYPSQQQ
SSQILPGAVPASVHPAMAGNIPSALPFGMPASIPFSMASNVTDSIGINFPANTPIHPVHG
NLACSMANPPIINVSSALHPSATPLPHGSAAAQSPAIVAAMQGNLLPNAGLGSDQGPSLP
PDSITPSPSTATPVPPSQ
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gttagtcagttcgacagcacgcgggtctggctgggcaagaactacaagaagtacattcaa
gcagaaccccctaccaataaatcattatccaacctagtggtacagctgctgcagttccaa
gaggaggtatttgggaagcatgtcagcaatgcaccgctcacaaagttgccaattaaatgc
ttcttagatttcaaagctggtggcgccctatgtcacatccttgcagcagcttataaattc
aagagtgaccaaggatggcgacgtttcgatttccagaatccctcgcggatggatcgaaat
gtggagatgttcatgacgattgaaaaatctctggtacagaacaattgtctatctcgtcct
aacatttatctacatccagatattgaccccaaattgcaagccaagctgaaagacattgtc
aaacgacatcagggaaccataactgaagataagagcagtgcctctcatattgccttccct
gttcctggtagcttggaagaagaagaatgggttcgtccaattatgaagagagacaaacaa
gttcttcttcactggggctactatcctgacagctatgacacttggattccagccagtgaa
attgaagctcccgtggaggacgctcccacgccagagaaaccccgtaaggttcacgcaaag
tggatcctagacacggacacttttaacgagtggatgaatgaagaggactatgaggtaaat
gacgagaagagccctgtctccaggaggaagaaaatctctgccaagactctcactgacgag
gttaacagtcctgattcagatcgaagggataagaaggggggaaattataaaaaacggaaa
cgttccccttctccttcgcctactccagaagcaaagaaaaaaaatgccaagaaagggcct
tccacaccctacaccaaatccaaacgtggccaccgtgaggaagaacaagaagatctcaca
aaagacatggatgaaccttctcctgtccctaatgttgaagaggtcacgctgcccaaaaca
gtcaatacgaagaaagattctgaatctgctccagtgaaaggcggtaccatgactgatttg
gatgaaccagaggatgagaacatggagacggcaggcaaggatgaagaagagaataatgct
gggaacaagggagagcagaccaagaaccctgacctgcatgaagacaatgtgaccgaacag
acccatcacattatcatccccagttatgcagcttggtttgactacaacagtgtccatgcc
attgagaggagagcccttcctgagtttttcaacggcaagaacaagtcaaagacgccagaa
atctacttggcttaccgcaatttcatgatcgacacataccggctcaatccgcaggaatac
ctgacttccactgcatgtcgtcggaacctggctggtgatgtctgtgccatcatgagagtc
catgccttcctagaacagtggggactcatcaattaccaagtagatgcagagagccgaccc
accccaatgggacccccacccacatctcacttccatgttctggctgacacgccttcggga
ctggtgccattgcagcccaaaacaccccagggtcgtcagagtgatagcgataccaagact
ggacgaaagggcaaagagattgaagatcttgtcacagagacagtgaaagggaaaccggag
ctgcaaaccacagcttcccagcagatgttaaacttcccagacaagagcaaggagaagcca
ccggatatgcaaaattttggactccgcactgacatgtacacaaagaagaatgttccttct
aagagcaaagctgctgctagcgctactcgtgagtggacagaacaggagacactgttgctg
ctggaggccctggagatgtacaaggatgattggaacaaagtgtctgagcatgttggcagt
cgtactcaggatgaatgcattctgcacttcctgcgtcttcccattgaagacccttacttg
gaggattctgaagcctctcttggacccctagcctatcaaccgatccccttcagccagtca
ggcaaccctgttatgagcacagtggccttcctggcttcagttgtggacccccgcgttgct
tctgcagcagccaagtcagccttagaggaattctccaagatgaaggaggaggtgcccaca
gccctggtagaagctcatgttcgcaaagtggaggaagctgctaaggtgacaggcaaggca
gatccggcatttggtctggagagcagcggaattgcagggaccacgtccgatgagctggag
agaataggtgaggggggcgagcggggcgccttccgcgcttcaacccgtgaagtgccctcg
ttggatctcgcccagtatgcggtggggactaagaagggggccgagacgcaagagaacaga
gctggcctggcttccggcctggagctcacactcaatcgcctggcacaggaagagagctgc
acagatgaaaaccggtcagaacctcagccatctgaagagaagaaggagttgaaggaacaa
agggaaggcgttcttgaggaagagactaaggagaaacttggagaggtgcctaggaaggag
gatgataaaagcaaggaggctgatggtgaaaaagaaatggataagagtgatggggacact
ttggctgatggagaaaaggaaaaagagccaaaagagggccaggaagagggacctaaggac
cttgcagaagctgagagtgagcggaagaccaaggtggagagggacattggtgaaggtaac
ctctccactgcagcagctgctgccttggctgctgcagcagtaaaggcaaagcatttggca
gcagtagaggaacgtaaaatcaagtcgctcgttgccttgctggtggagacccagatgaag
aagctcgagatcaaactgaggcactttgaagagctggagaccatcatggatcgggagcgg
gaggccctggagtaccagaggcagcagcttctggctgatcgtcaggccttccatatggag
cagttgaagtatgctgaaatgcgtgctcgccaacagcattttcagcaaatgcaccagcag
caccagcagcagcagcagccaccgccgccgccagccctgtctgtgggatctcagcccctt
ccttcttcaggagctcctctggcacctactgctcactccatgcccatctcccaaacacct
gttccagctgccagcacagtaggacagcccagcagtatggctcaagctgaacagatgggg
cagtctgtgtcagttcagccacagcagtcggcaactggcgctcctcatactggcccgagt
cagactggacagccttccgcaggttcccatgcccagcctccgtaccccagccaacaacaa
tcatcccagattctcccaggggcggtcccagcaagcgttcaccctgccatggctggtaat
atcccctcggctctacctttcggaatgcctgcctccatcccatttagcatggctagtaac
gtaacagactccatcggcattaacttccctgctaacacgcccatccatccagtgcatggt
aaccttgcgtgcagcatggctaatccgcccatcatcaacgtctctagcgccctgcaccct
tctgccacccctctgcctcatggttctgcggctgcccagagcccagctattgtggcagca
atgcagggcaaccttcttccaaacgctggtcttggatcagatcaaggaccttcactgcca
ccggattctatcactcccagccccagcacagctacgccagtcccaccctcacagtga
DBGET
integrated database retrieval system
