Crotalus tigris (Tiger rattlesnake): 120300715
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Entry
120300715 CDS
T08476
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
ctig04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120300715 (CACNA1B)
04020 Calcium signaling pathway
120300715 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120300715 (CACNA1B)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120300715 (CACNA1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120300715
NCBI-ProteinID:
XP_039182999
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MARFGEDLPSRYGGGGAGAAPGPGGARGGSRQGGPPGQPGPRPQVYKQTKAQRARTMALY
NPIPVKQDCFTVNRSLFIFSEDNAIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLP
DGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGIL
ATAGTQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAI
IGLEFYMGKFHKACFSNETGERLGDFPCGEDWPARRCEEGTCKKYWEGPNFGITNFDNIL
FAVLTVFQCITMEGWTDILYNTNDAAGNMWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRATI
KKSKNDLIHAEEGEDHFTDVCSVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVKA
QSFYWIVLCVVALNTMCVAIVHYDQPEGLTTTLYFAEFVFLGLFLTEMTLKMYGLGPRNY
FHSSFNCFDFGVIVGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFHFNDETPTTNFDTFPTAILTVFQILT
GEDWNAVMYQGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKD
EEEMEEATNQKLALQKAKEVADVSPLSAANISITAFVKQTRSSISRSSSLSSVNSPKQQN
SCKSKSVWEQRTSQLRVYNFRTSSEALYNELDPEDRVRYATNLHIRPDMKTHLDRPLVVE
PRSEGHSSNLNAVSPAEGQEAPDQVKAPPPENDEVVRKHHRHREKEKTGDTEKGSAVKEE
NGELGGGNNKEERHRPYRSRSKEVGEGGGKEGKSERNRSQERGRHHHRRGSVEEGAEREH
RRHRGHRHPVERQVKEGNGTANGTKTERRSRHRGGSRPGNREGEAGSKGEGGEEPHRRQK
IRHKALSTYESVDKENGEKEGELGRKDLKNVQPRESQCDTEAGISMTVAPLHTLPSTCLQ
RVPEQPEDADNQKNVTRMGQPSLDKPAPVNIPVTVTAPPGDASVIPMNNVEFEAKMEEKK
DIDAEDDVANSRPKPILPYSSMFVLSPTNPLRRLCHYIVNMRYFEMVILFVIALSSIALA
AEDPVQAESPRNEALKYLDYIFTGVFTFEMVIKMIDLGLLLHRGAYFRDLWNILDFIVVS
GALVAFAFSSFIGGNKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLN
ILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKDLEKDCRGQYLAYEKDEVEAQPRQWKKY
DFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFP
FFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYRM
WKFVVSLPFEYFIMVLIALNTIVLMMKFYGAPEPYEDMLKCLNIVFTSMFSLECVLKIIA
FGALNYFRDAWNIFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYT
IRILLWTFVQSFKAWPYVCLLIAMLFFIYAIIGMQVFGNIALDDDSAINRHNNFQTFLQA
LMLLFRSATGEAWHEIMLACLSNQPCDEHSNLSRNECGSDFAYFYFVSFIFLCSFLMLNL
FVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYTDMYEMLRHMSPPLGL
GKKCPARIAYKRLVRMNMPISNDDLSVHFTSTLMALIRTALDIKLASGVLQHQCDAELRK
EVSLVWPNLSSKTLDLLVPPHKPEAMTVGKVYAALMIFDFYKQNKNTRDPSHSGPGGLCQ
TGTVSLFHPLKAALEQSQSGFPNAFLRQKSSASLNNGGALPMPKGGGIKESVSWGIQHTQ
NMFYETRTPAFQRGHSEEIPVQQVVEMQEVSPTLANGEHQLGLESQGRAASMPRLAAETQ
RSKTRSPGRYLSPIPDTSPMKRSISTLNPQRPRATHLYEYPRPAEHTHHHHHHRCHRRRE
KKQKSVDKPSNHLIEGEAPAEEATSKSRKQERGRSQERKVHSSSSSEKQRFYSCDRFGSR
DQPKSSEGSRPPSPGGGQEHGTQRQGSGSVNGSPLLLTSGASTPCRGRRQLPQTPLTPRP
NITYKTANSSPVHFSGFQTGLPTFSPGRLSRGLSEHNALLHGDSQGPSPTLMARIGSDPY
LGHREESDSPYHMMPEDTLTFEEAMATNSGRSSRTSYVSSLTSQSHPIRRVPNGYHYVLG
LSAGPGTSTRARSYYHERDEDDWC
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcttcggagaggacctgcccagccgctatggaggtggcggcgcgggggccgcc
cctgggcccggcggggcccgcgggggcagccgccaggggggcccccccggccagccgggc
ccgcggccccaggtatacaagcagaccaaggcgcagcgcgcccggacaatggctctttac
aaccccattccggtcaagcaggactgctttacagtcaaccggtcgctcttcatctttagc
gaggacaacgcgatccgcaaatacgccaagcgcatcacggagtggcctccctttgaatat
atgatcctggctaccattatagctaattgcattgttctggctttggagcaacatctccct
gatggagataagacacctatgtcagagaggctggacgacaccgaaccgtatttcattgga
atattttgcttcgaagcgggcataaagattatcgctctgggttttgtttttcacaaagga
tcttatctccgcaatggctggaatgtgatggattttgtggtggtgcttacagggattctg
gctacagctgggacccagtttgaccttcgaacgctgagagccgtccgtgtgctgagaccc
ctgaaacttgtctcaggaattccaagtttacaagttgtcctcaaatccatcatgaaggca
atggtaccccttctccagatcggccttctcctcttctttgccatcgtgatgtttgccatt
atcggtctagaattctacatgggcaaattccacaaagcttgcttttcaaacgaaacaggt
gagagactgggagacttcccgtgcggtgaagactggcccgctaggcgctgtgaagaaggc
acgtgcaaaaaatactgggagggccccaactttggcatcaccaacttcgacaatatcttg
tttgccgtgctcaccgtcttccaatgcatcaccatggaaggatggaccgatatcctctac
aatactaacgacgctgcagggaacatgtggaattggctttacttcatccccctcatcatc
atcggctccttcttcatgctcaacctggtccttggtgtcttatcaggtgagtttgccaaa
gaacgagaaagagtggaaaaccggcgagctttcctgaaactacgaagacagcagcagatt
gaaagagagcttaatggatacttggagtggatctttaaagcagaggaggtgatgttagca
gaagaagacaagaatgctgaagagaaatctcccttggatgtgctgaaaagagcaacgata
aagaaaagcaaaaatgatctaatccatgctgaagagggagaagatcacttcacagatgtt
tgctctgtggggtctccgtttgcccgggccagcctaaagagcgggaagactgaaagctcc
tcctacttccgtcggaaagagaagatgttccgctttttcattcggcgcatggtgaaggcc
cagagcttctactggattgtcctctgtgtggtggccctcaacactatgtgtgtggccatt
gtgcattatgatcaaccagaaggtctcactaccacgctttattttgctgaatttgtcttc
ctgggtttgttcctcaccgagatgactttgaagatgtacggtctggggccaaggaactac
ttccattcctcattcaattgcttcgattttggggtgatagtcggaagcatctttgaagtc
atctgggctgtggtgaaacctgggacttcttttggcatcagcgtgctgagagccctccga
ctgttgaggatcttcaaagtcaccaaatactggaactcgttgaggaacttggtggtctcc
ttgctgaattcgatgaaatccatcattagcctgctgtttctcctcttcctgttcatcgtg
gtgtttgccttgctggggatgcagctttttggcgggcagtttcacttcaatgacgaaaca
ccaacgaccaactttgatacctttcccactgccatcctcactgtgttccagattctgact
ggggaagactggaacgccgtgatgtaccagggcatcgaatcccaagggggtgtccattct
ggaatgttctcctccatctacttcattgtcctcacactctttggtaactatacgctcctg
aatgtcttcctggccattgcggtagacaatcttgccaacgcacaagagttgaccaaggat
gaagaagaaatggaagaagctaccaaccagaagcttgccttgcagaaggcgaaagaggtt
gcagatgttagccccctgtctgcagctaacatttctatcacagcttttgtaaagcaaact
cgaagttccatatcgcgcagctcgtcgctctccagcgtaaattcacccaaacagcagaat
tcctgcaaatccaaatccgtgtgggagcagaggaccagccagctccgcgtgtacaacttc
cgcaccagctctgaagccctgtacaatgagctggacccagaggacagggtccgctatgcg
accaacctccacatccgtcctgacatgaagactcacttggaccggcctctggtggttgag
cccaggagcgaaggccacagcagcaacctcaatgccgtcagccctgcagaggggcaggag
gcccctgaccaggtgaaggccccaccgcctgagaacgacgaggttgtgaggaaacaccac
cggcatcgcgagaaggagaagacgggagacacggaaaaaggcagtgccgtcaaggaagag
aatggtgaattgggtggtgggaacaataaggaggaacgccaccggccctaccggagccgc
agcaaagaggtgggcgaggggggtgggaaggaagggaagagcgaacgcaaccggagccag
gagagaggccggcatcaccatcgccgggggtccgtggaggaaggtgctgagagggagcat
cgacgccaccgaggtcatcggcatcccgttgagcgacaggtcaaagaaggcaacgggacc
gccaacggaaccaagaccgaacgacgttcccgccaccgaggagggtccaggccgggcaac
cgagaaggggaggctggctccaaaggggaggggggcgaagagccccaccgacggcagaag
atacggcacaaggccctctccacttatgagtcagtggacaaggagaacggagagaaagaa
ggagagctggggagaaaggatctaaagaatgtgcagccaagggaaagccagtgtgacaca
gaggcgggcataagcatgactgtggcccctcttcacaccttgcccagcacctgtttgcag
agggtccctgagcagccagaggatgctgacaatcagaagaatgtcacccgcatgggtcaa
ccatctttggacaagcctgcccctgtcaacattcctgtcaccgtcaccgctcctcccggg
gacgcatccgtcataccaatgaacaacgttgaatttgaagccaaaatggaagagaagaag
gacattgatgctgaggatgacgtggccaacagcagaccaaaaccaatccttccctacagc
tccatgttcgtcttaagcccaaccaaccctctccggcgcctctgtcactacattgtcaac
atgcgttattttgagatggtcatcctctttgttatcgcactcagcagcattgccctggct
gccgaagatcctgttcaagcggagtcacccagaaatgaggctctcaagtacctggattat
atatttacaggtgtctttacttttgagatggtgataaagatgattgacttgggacttttg
ctgcatcgtggtgcctatttccgggatctttggaacatcctcgacttcattgtggtcagt
ggagctcttgtggcatttgccttttcgagtttcataggagggaacaaaggaaaggatatt
aacaccattaagtccctccgggtgctacgggtccttcggccgctgaaaaccatcaaacgt
ctccccaaattgaaggcggtcttcgactgcgtggtgaactctctgaagaacgttctcaac
atcctcattgtctacatgctcttcatgttcatcttcgctgtcatcgcggtgcagcttttc
aaaggccgcttcttctactgcaccgatgaatcgaaggacttggagaaagactgcagaggc
cagtatctggcttatgagaaagatgaagtggaggctcagcccagacagtggaagaaatac
gatttccattatgacaatgtcctctgggctctgttgaccttgttcaccgtctccactggg
gaaggatggccaactgttttgaagcactctgttgatgcaacgtatgaaaaccaaggccca
agtcctggctaccggatggagatgtctatcttttacgtcgtctattttgtcgtcttcccc
tttttctttgtgaatatctttgtagctttgatcatcatcaccttccaagaacagggcgac
aaagtgatgtctgaatgcagcctggagaaaaatgagagagcctgcatagactttgccatc
agtgccaaacctttgacccgctatatgccccaaaacaaacaatcattccagtacagaatg
tggaaatttgtggtctctcttcctttcgagtactttatcatggtcctgattgcgttgaac
accattgtgcttatgatgaagttctatggtgcccctgaaccctacgaagatatgctgaaa
tgcctcaatattgtcttcacctccatgttttcactggaatgtgtcttgaagatcatcgcc
tttggtgcattgaattattttcgtgatgcctggaacatttttgattttgtcacagtcttg
ggaagtataactgatattttagtcacagagattgcggacacggataatttcatcaacctg
agcttcctccgcctcttccgggctgcgcggcttatcaaacttctccgtcagggctacacc
attcggattctgctctggacttttgtccagtcttttaaggcctggccctatgtgtgcctc
ctcattgccatgctgtttttcatctatgccataattggcatgcaggtctttggaaacatt
gctctggatgatgacagcgccattaatcgtcacaataacttccaaacttttctgcaggca
ctaatgttgctttttcggagtgctactggagaagcctggcatgaaatcatgcttgcgtgc
ctcagcaaccagccctgtgacgagcactcaaacctcagcagaaacgaatgtggcagtgac
ttcgcttacttctactttgtctccttcatcttcctctgctcctttctgatgttgaaccta
tttgtggctgtaatcatggacaactttgagtacttgacacgagattcttccatcctagga
cctcatcatctggatgaattcattcgagtttgggcagaatatgacccagctgcttgtggg
cggatcagttacaccgacatgtacgagatgctgaggcacatgtcgccaccacttggcctc
gggaagaaatgccctgctcgtattgcctataagcgtttggtcaggatgaatatgcccatc
tcgaacgatgatttaagtgtccacttcacatcaacgctaatggccttgatccggacagcc
ctggacatcaaacttgcatcaggtgtgctgcaacatcagtgtgatgctgaactaaggaag
gaggtttcgttggtttggcccaatttgtcttccaaaactttggatctgttagtgccacct
cataaacctgaagccatgacagtgggaaaggtttatgcagccttgatgatatttgatttc
tacaaacaaaacaagaacacccgtgacccctctcactcagggcctggaggtctctgtcag
accgggactgtttcccttttccatccattgaaagcagcccttgagcaaagccagtcagga
ttcccaaatgcttttctgcgtcaaaagagctccgcgtcactcaacaatgggggtgccctg
ccaatgcccaaaggaggaggcatcaaagaatcggtttcttgggggatccaacacacccag
aacatgttttacgaaactaggacaccagcgtttcaacggggccattcggaggaaattcct
gtccagcaggttgttgaaatgcaagaagtcagcccaactttagccaatggggaacatcag
ctgggactggagagtcaagggcgagcagcttccatgcctcggctggcagctgaaactcag
aggagcaaaacacggtcaccagggcgatatctatcacccattccagacaccagccccatg
aagcggtccatctccacactcaacccacagcgtccccgtgccacacatctttacgaatat
ccccggccagctgaacatactcatcaccatcaccaccatcgttgccatcggcggagagag
aagaagcagaagtcagtggacaagccatccaaccacttgattgagggtgaagctcctgca
gaagaagccacctccaagtccagaaaacaggagcggggccggtcccaggagcgaaaagtc
cattcttcttcttcctctgaaaagcagcgcttttactcctgcgaccgctttgggagtcgg
gatcagcccaagtcctctgaaggcagtcgacccccatccccaggcggagggcaggaacat
gggacacagagacagggcagtggttcagttaacgggagccccctgctgttgacctctggt
gctagcaccccctgccgtggtcggaggcagttgccgcagaccccgctgacgccacgccct
aacattacctacaagactgccaactcctcgcctgtgcatttctccgggttccagaccggc
ctgccaactttctccccgggacgcttgagccggggtctctctgagcacaatgctttgctg
catggcgactcccagggaccctcaccaaccctgatggcccggatcggttcggacccttac
ctgggacaccgggaggagagcgacagtccctaccacatgatgcctgaggacaccctcacc
tttgaggaggccatggccaccaattcagggaggtcctcccgaacctcttacgtttcctct
ctaacgtcccagtcccatccaatccgtcgagtccccaatgggtaccattatgttttggga
ctgagtgccggccctggcaccagcactagggcgcgtagctattaccacgagcgagacgaa
gacgattggtgctag
DBGET
integrated database retrieval system
