Crotalus tigris (Tiger rattlesnake): 120300942
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Entry
120300942 CDS
T08476
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120300942 (CTCF)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120300942 (CTCF)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120300942 (CTCF)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120300942 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
LIM
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
120300942
NCBI-ProteinID:
XP_039183450
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MEGDMEADAVEAIGEETFIKGKERKTYQRRREGGPEEDACPMPPNQVDGTEVVQEVNAGV
QMVMMEQLDPTLLQMKTEVIEGAVPPDAEATVDDTQIITLQVVNMEEQPINLGELQLVQV
PVPVSVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETL
EQGELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLS
DVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHL
CGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDY
ASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQ
SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHE
RYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLL
DMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCLGPDGVEGENGGEPKKGKRGR
KRKMRSKKEDSSDSEENAEPELDDNEEEEETAVEIEAEPEVEPVAPTPPPAKKRRGRPPG
KANQPKQPQPTAIIQVKDQNTGAIENIIVEVKKKPETETVVATPGTQPAAVEAPNGDLTP
EMILSMMDR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgacatggaagcggacgcagttgaagctatcggggaggaaactttcatcaaa
ggcaaagagcggaagacctaccagagacgccgggaaggcgggccggaagaagacgcttgc
ccgatgccgcccaaccaagtagacgggacggaggtcgtgcaggaggttaacgctggcgtt
cagatggtcatgatggaacagcttgatccaacgctgcttcaaatgaagaccgaggtcata
gaaggcgccgtgccaccagatgccgaagccaccgtggacgacacccaaattatcaccctg
caggttgtgaacatggaagagcagccgatcaacctgggcgaactccagctcgttcaagtg
cccgtcccggtctcggtccccgtggccaccacttctgtggaagaacttcagggggcctac
gagaacgaggtctccaagggtggcctccaggagggggagcccatgatctgccatacgctc
cctctgccggaaggcttccaggtggtgaaggtgggggccaacggcgaggtggagaccctg
gagcagggggagcttcagcctcaggaggaccccaactggcaaaaagatccagactatcag
ccccccgccaaaaagacaaagaaaaccaaaaaaagcaaactccgctacaccgaggagggc
aaggacgtggatgtgtcggtgtacgattttgaagaggagcagcaggagggcctgctttcc
gatgtcaacgcggagaaagtggtgggcaacatgaagccccccaagccaacgaaaattaaa
aagaaaggggtgaagaaaacattccagtgtgaactgtgcagttacacctgcccccggcgt
tcaaacctggaccgtcacatgaaaagccacacggacgagaggccacacaagtgccacctt
tgcggcagagctttccgaacagtcacactgctgagaaatcacctcaatactcacacaggt
actcgtcctcacaagtgccccgactgcgacatggcctttgtgacaagcggagagttggtt
cgacatcgccgctataaacatacccacgagaagccattcaagtgttccatgtgtgactac
gccagtgtggaggttagcaagttgaaacgccacattcgttcacacaccggggaacgccca
ttccagtgcagcttgtgcagctacgccagtagagacacttacaaactgaagaggcacatg
aggacccattctggtgagaagccctacgagtgttacatttgccacgctcgcttcacccag
agtgggaccatgaagatgcacatcctgcagaagcacacggaaaacgtggccaagttccac
tgcccccactgtgacacggtgattgcacgaaagagcgatttaggtgtccatttgcggaag
cagcattcctacattgagcagggcaagaagtgccgctactgtgacgccgtgttccacgag
cgatacgcactcatccagcaccagaagtctcacaaaaacgagaagcgcttcaaatgtgac
caatgcgactatgcatgccgacaggaacggcacatgatcatgcacaagcgaacccacact
ggagaaaagccttacgcctgtagccattgcgacaaaaccttccgccagaagcagctgctt
gacatgcacttcaagcgctaccacgatcccaactttgtcccggctgccttcgtctgctct
aagtgtggcaaaacgttcacacgccgtaacacaatggccagacatgcagataattgtcta
ggccccgatggggttgaaggagagaacggaggggagcccaagaaggggaaacgtgggcga
aagagaaagatgcgctccaagaaagaggattcttctgacagtgaggaaaatgctgaacca
gaattggatgacaacgaggaggaggaagaaacagcggttgaaattgaggctgagccagaa
gtggagcccgtggccccaactcctccaccggccaagaagcggagaggacgtccaccaggc
aaagccaatcaacccaaacagccccagcccacagcaatcattcaggtgaaagaccagaac
actggtgcaattgaaaacattattgtggaagtgaagaagaagcccgaaacagagactgtc
gtggccactccaggaactcagccagccgcagtggaagcgcccaatggagacctcacccca
gagatgatccttagcatgatggaccggtga
DBGET
integrated database retrieval system
