Crotalus tigris (Tiger rattlesnake): 120301401
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Entry
120301401 CDS
T08476
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120301401 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120301401 (TAF4B)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120301401 (TAF4B)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120301401 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
120301401 (TAF4B)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120301401 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120301401
NCBI-ProteinID:
XP_039184531
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MTTPPVTAEAVLGRVMTPGPPEHAVDPPVSAANGIQQLRAVLPAQRTIFSAFCPAIPTSS
SARFVLNPVGAKLPLSFAPSFAPQPRVLPAPVEIKLAPSTPAQQLPKSSNMGGRQPAPLS
GGLKPAQTTIQLPANFQIPQGTILVRSNTGQLMLISQQALLQTQSQTSNNTSVRCSIPPP
TIKIQPVQSSGTQVLKVLTAPVKTLSWATHSVTSTVKKPAIIQSVASPNIGLTAKSQVAG
SSAKPPVSDSPVLAFTSKPVADTGDSRATQPISYTEMLENVKKCKNFLTTLIKLASSGSQ
ASQTGQTVKNLVQSLLEAKIEPEEFTKELYVELKSSLQPNLVPFLKKSLLALRQLMPNTE
TFIEQCLQQSVPQTASSAYPTASSTSSTVADSTFVTIASSQAATSVPSSPLQMSFPQMSV
SAPCTTTSGSESLPLAEPACALAAGALSYQNDKSILSTQLIGGINTMKVIQPTSTAGETG
AVSLQVTKPDCNPTLPPTAVTTNSMKSSTSAVMTSLEVAKLVLTTTATSAASMNTLQPVL
PITEVPTAVRIAHPNSALPQQIQTSQPVKVKQLAVQQPSGSILRNVVKHQQGSSVPIVNK
LCEKRPLNAFIQGSIVKQITLAGNKIVSLEASPVQRNKIKENGATSFREEDDINDVASMA
GVNLSEEHACILATNSEAIGTILCSCPEKLLLSSEALQKRILKKGKRHDIMEVNSDVLNL
ISHATQERLRGLLEKLTLIAQHRIRTYKGNDEYILSNDTRSQLQFLEQLDQVEKRRKDEE
EKEQLLWAAKSRCNKEDPEQLRLKQKAKEMQQLEFAQMQQREANRAALEALGPRKKRPLD
SSSSFSGLEGFNRSSGLAKSYLWPRITRICLRDLIFCLEQEKETKHSLILYQALLK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgactactccgccggtgacggcagaagccgtcctggggagggtcatgactcctgggcct
cctgagcatgctgtggatccccccgtgagcgcggctaacgggatccagcagctacgggcc
gtgctgcccgctcagagaacgattttctccgccttctgtccggcgattcccacgagcagc
tctgctagatttgtcctgaatcctgtgggcgctaagcttccccttagtttcgccccatcc
ttcgctcctcaaccccgagtactgcctgctcccgtagaaatcaaactagccccctcgact
ccggctcagcagctccccaagtctagcaacatgggtgggaggcagccagcccctctctcg
ggaggactcaaacccgcacaaacgacaatacagttgcctgctaattttcaaatccctcaa
ggaacgattctggtcagaagtaatactggtcaattaatgttgatatctcaacaagcatta
ttacaaactcagagtcagacctcaaataataccagtgtaagatgctcaatacctccacct
acaatcaaaattcagcctgtacagagttctggaactcaggtacttaaagtactaacggct
cctgttaaaacgctgtcttgggcaactcattctgttacttctactgttaagaagcctgct
ataatccagtctgtagcatcaccaaatataggcttgacagcaaaatcacaggttgctgga
tcatcagcaaagcctcctgtttctgactctcctgtgttggctttcacttcaaaaccagtt
gctgatacaggtgactcaagagccacccagcctatcagttatacggaaatgctggaaaat
gtgaaaaagtgcaaaaacttccttacaacactaataaaactggcatccagtggatctcaa
gcatctcaaacagggcagactgtgaagaatctggttcaaagtctgttggaagctaaaatt
gaaccagaagaatttaccaaagaactatatgtggaactgaagtcttcactccagccaaat
cttgttccctttctcaagaaaagtttacttgccttacggcaattaatgcctaatacagag
acttttatagaacaatgtctccagcaatctgtccctcaaacagcttcttctgcttatccc
actgcatcatcaacttcttccacagttgctgacagcacttttgtgactatagcctcttct
caagccgcaacatcagtccctagctctccacttcaaatgtcttttccacagatgtccgtt
tcagcaccctgcacgactacaagtggttctgaatctcttccacttgctgagccagcttgt
gccttggctgcaggggcactctcttaccaaaatgacaagtccatcctctccactcaactg
attggaggaatcaataccatgaaggtcatacagccaacttccactgcaggggagacagga
gcagtttctcttcaggtaacaaagccagactgtaacccaacattacctccaactgctgtt
actactaattctatgaaatcatccacatcagctgtgatgacatcacttgaagtggcaaag
ttggtcttgactaccacagcaacctcagctgcatcaatgaacactctccagcctgtcttg
cctatcactgaggtaccaacagctgtaaggattgcccatcccaattctgcccttccccaa
caaattcagacttctcagcctgtaaaggtaaaacagttggcagtccaacagccctctgga
agcatcttaagaaatgtggtcaagcatcagcagggttcttctgtccctattgtgaacaag
ttatgtgaaaaaagaccactgaatgcttttatacaaggctccattgtgaaacaaattacc
ttggcaggaaacaaaattgtgtcgcttgaagcatctcctgttcagagaaataaaataaaa
gagaatggagcaacatccttcagggaagaagatgacattaatgatgtggcttctatggct
ggtgttaacttgagtgaagagcatgcgtgcatattggcaaccaattctgaagcaatcggt
actattttgtgctcttgtccagagaagctcctcctttcttcagaggcattgcagaagagg
atcttaaaaaaaggtaaaaggcatgacattatggaagttaattctgatgttctgaacttg
atctcccatgctacacaggagagattaagaggacttctagaaaaactaactttaattgct
caacatcgtataaggacctataaggggaatgacgagtacattttatctaatgatacacgg
tctcagcttcagtttcttgagcaattggatcaggttgagaaacggaggaaagatgaagaa
gaaaaagaacagttgctctgggcagccaagagccgttgcaataaagaagatccagagcaa
ctgcgtttaaagcagaaagccaaagagatgcaacaattggaatttgcacaaatgcagcaa
agggaggctaatcgggcagccctggaagctcttgggccaagaaagaagagaccactggat
tcgtctagttctttttctggacttgagggattcaacagatcgtctggtcttgcaaaatca
tacctttggccaagaataacccgaatttgtctcagggacttgatcttttgtctggaacaa
gagaaagaaacaaagcattctctaatcttatatcaagctcttctgaaatag
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