Crotalus tigris (Tiger rattlesnake): 120301417
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Entry
120301417 CDS
T08476
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03083
Polycomb repressive complex
ctig04980
Cobalamin transport and metabolism
ctig05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120301417 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
120301417 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120301417 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120301417 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120301417 (HCFC1)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120301417 (HCFC1)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120301417 (HCFC1)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120301417 (HCFC1)
HMT complexes
COMPASS/SET1 complex
120301417 (HCFC1)
MLL-HCF complex
120301417 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120301417 (HCFC1)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120301417 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
120301417
NCBI-ProteinID:
XP_039184573
LinkDB
All DBs
Position
Unknown
AA seq
2184 aa
AA seq
DB search
MASPVVPSGGSPTGGGATAGLLQPRWKRVIGWSGPVPRPRHGHRAVAIKELIVVFGGGNE
GIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYEL
QASRWEWKRLKAKMPKNGSTPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDL
YILELRPGSGVGSWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLW
TLDIDSLTWNKPNLRGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCT
NTLACLNLDSMAWEPILMDTLEENTPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCC
KDLWYLETEKPPPPSRVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPAASSPAANPV
PSVPVNPPKSPAPAAAAPVPAVQPLAQMGITLLPQTTAVAAATAAAAAAAAAPTPPTTTT
IQVLPTVPTSPMPGPPVAAAAATPRPQTVPAVLKVTGPQATTGAPLVTVRSAGQAGKGPV
TVTSLPAGVRMVVPTQSTQGTVIGSSSQMSGMAALAAAAAATQKIPPSSAPTMLSMPAGT
TIVKTVAVSPGTTTLPTTVKVASPVMQVSNPATRMLKTAAAQVGTSVSSSTTNTPTRPII
TVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPISMPGGSALISNLGKVMSVVQTKPVQ
SSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITSSQAGGTGTKPTILGI
SSVSPNTTKPGTTTIIKTIPMSAIITQSGATGVTSSSGIKSPIAIITTKVMTSGTGTPAK
IITASLPKLATGHGQQSVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTL
VVKGTTGVTTLGTVTGTMSTSLAGTGAHNTNASLATPITTLGTIATLSSQVINPAAITVS
AAQTTLTAAGGLTTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTEQPTA
TVTIAESGQGDPQPGTVTLVCSNPPCETHDTGTTNTATTTVVGTLGGPAQLQFVCDGQEG
GGLQPNGRVVRVCSNPPCEMHETGTTNTATIVLSAGQKICSNPPCETHETGTTNTATISK
TEKAPAEPPCQTFQTNATGTTMTVKPIVGTGQLVCSNPPRETHETGTTNTATTTTSHMGQ
GQPDDGQKEPANTSCQTKQTGSTSTTMTTKTDIPTEQPCAVQIVSFVPDAGLPSVASGAT
TVQSGERLQALKKAQCESHHTHTTNTATTARSLMGQGQPDGEWVGSANPPCQTQQTNSTS
TTMSVKVDVPVQSSAPCKTHNTDNKDTNLQVCSNPACETHETGITNTATVTTSNLGATQR
VCSNPPCETHETGTTNTATTATSNIATGQQACSNPPCETHETGTTNTATTTTSNLGAGQN
ESAQHQQPPVTPPCETQQTNSTSTIMTPSIGGDGAQSSSSALAQCGNSELRKTPERESPG
AAGSSPQSSTPRICSNPPCETHETGTTHTATTVTSSMGANQDQPPATNGQQGEPEIPVTE
SSAASSPSAVVVTTVSTTQIRAVTTVTQSTPAPGPSVPNISTLADVPADEAVPPAEAPDT
TSTDSLPAPSEPLQSSIEMQTAVATPEPQGQAQVASAGTPPTEGPLGETAPHPELVPPTE
ETPPTPAAPAQEPVAMVVLPQATPAAPPSSEVEQLALPQELMAESQAGTTTLMVTGLTPE
ELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGPGEAMDTSEAAATQAELGHLSS
EGPEGQATAIPIVLTQQDLAALVQQQQQQLQEAQAAAAAAAAAVQQQQQQQQPPQHQLPA
HLPTEALAPADSLNDPASESNGLNELASAVTSTVGLLPPTPTESLAPSNTFVAPQPVVVA
SPAKLQAAAALTEVANGIEPAPVKPEPPTQLPKVIVKKENQWFDVGIVKATNMVVTHYFL
PPDDAPATDDDSGTTPDYSQFKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGF
PGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAIQSPQAGEPKTAAPAQLAFMRV
YCGPSPSCLVQSASLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGSMTK
PTNKRPLSSSDLKSAPKKPKADGQ
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctgttgtccctagtgggggctccccaacaggtggtggggccactgcaggg
ttgctgcagccccgctggaagcgtgtgattgggtggtcaggccctgtgcctcggccccga
catggacacagagctgtggcaatcaaagagctgattgtggtcttcggagggggcaatgag
ggcatcgtggatgagttgcatgtctataatacagctacaaaccagtggtttatcccagct
gtgcgtggagatattccaccaggttgtgctgcatatggttttgtttgtgatgggactcgt
ctcctggtatttggtggaatggttgaatatggcaagtacagcaatgatctgtatgaactg
caggccagccgttgggaatggaagagactcaaggccaagatgcccaagaatgggtccaca
ccatgtccacgccttggccatagcttctcgttggtgggcaacaaatgttacctttttggg
ggactggccaatgacagtgaagatcctaagaataacattcccaggtacctaaatgacctc
tatatcttggagctgcggccaggatctggtgtggggtcctgggacattcccatcacctat
ggtgtattacctccaccacgagaatcccatactgctgttgtctacacagaaaaagacaac
aaaaaatccaaactggtcatatacggaggcatgagtggttgtcgtcttggtgatctctgg
acactagatatcgattctctaacgtggaacaagcccaacctgagaggagttgcaccactc
cctcgcagtctgcattcagccacaaccattgggaacaaaatgtatgtatttggtggctgg
gtgccccttgttatggatgatgtcaaagtggctacgcatgaaaaggaatggaaatgcaca
aatactctggcctgcctcaacctagactccatggcttgggagcccattctgatggacaca
ctggaagagaatactccacgggcacgtgcagggcattgtgctgtagctattaatacccgc
ttgtacatctggagtggccgtgatggctaccgtaaagcctggaacaaccaggtttgctgc
aaggatctctggtatcttgagactgagaaacctccacccccttcacgggttcagctggtc
cgtgccaacaccaactccttggaagtgagctggggttctgtcccaactgcagatacttac
ttactccagctgcagaaatacgacatcccagctgcctcttcgccagctgctaatcctgtg
ccctcagtgcctgtcaatccccccaagagccctgctcctgctgctgcggcacctgtccct
gccgtgcagcctctggcacaaatgggtatcaccttgctgccgcagaccacagctgtcgct
gctgccactgctgctgctgctgctgccgctgccgctcctaccccaccaaccacaacaacc
atccaggtgcttcctactgtgcctaccagcccaatgccggggcctcctgtagcagctgct
gctgctactcctcgtccacaaactgttccagctgtgctgaaagtcactggcccacaagct
accacaggagcaccactggtaacagtacggtcagcgggacaagctgggaaaggcccagtg
acagtgacttctttgccagctggggtacgcatggtggtacccacacagagtactcaaggg
acagtgattggtagcagttcccagatgagtggcatggcagctctggcagctgctgctgca
gccactcagaaaattccaccgtcctcagcccccactatgttaagcatgcctgctggtact
accatagttaagactgtcgcagtgtccccaggcaccaccacattacccaccacagttaaa
gtagcttctccggtcatgcaggtgagcaacccagccacccgcatgctgaagacagctgct
gcccaggtgggcacctcagtctcttcatccaccactaatacacctacccggcccatcatc
accgtgcacaaatcaggcactgtcactgtagcacagcaggcccaggtgatgacaactgta
gtgggtggggtaacaaagaccatcacattggtgaagagccccatctccatgcctggaggc
agtgcattgatttccaatttgggaaaagtgatgtctgttgtgcagaccaaaccagtccag
tcatcagctgtaacaggccaagcatcaactggtcctgtgactcagataatccagaccaaa
gggcctctgcctgctggcactattctgaaactagtgacctcagcagatggcaagcccacc
acaatcatcaccagctcacaggcaggtggcacaggtactaagcctaccatcctgggcatc
agcagtgtgtcacccaacacaacaaagcctggtaccaccactattatcaagaccatcccc
atgtcagctattattacacaatcaggtgccacaggtgttactagtagttctgggattaag
tctcccatcgccattatcaccacaaaagtgatgacctctggcactggtacccccgccaag
atcattacagcatcattacccaaactagccacaggtcatggacagcaaagcgtaacacag
gtggtgcttaagggggcaccaggacaacctggcacaatcttgcgaactgtccctatgggt
ggagtgcgacttgttacccctgtcactgtgtctgcagtcaagcctactgttaccactttg
gtagtgaaaggaacaacaggggttacaaccttaggcactgtaacgggcaccatgtcaaca
agcctagctggaactggggcacacaatactaatgcttccttggctacgcctattaccacc
ttggggaccattgccacactttccagccaggtcatcaacccagctgccatcactgtctca
gcagcacagacaaccctgacggcagcaggtggcctcaccactcccaccatcactatgcag
cctgtttctcagcctactcaagtcaccctgattacaacccccagcggagtagaggcccag
ccagtgcatgatttgcctgtttctatcttggcctctcccaccacggagcagcccacagcc
acagtcaccattgctgagtcggggcaaggagatccacagccaggcactgttacactggtg
tgctccaatccaccctgtgaaacacatgatactggcacaaccaacacagctacaaccaca
gttgtgggcactttgggtgggccagctcagttacagtttgtgtgtgatgggcaggagggt
ggaggcctccagcccaatggtcgagtggtgcgggtatgctccaatcccccttgtgagatg
catgagactggtaccaccaacaccgcaaccattgttctgagtgctgggcagaagatttgc
tccaatccaccttgtgaaactcatgagactggcaccaccaacacagccactatctccaaa
acagaaaaagcacccgcagagccaccctgccaaactttccagacaaatgccactggcacc
actatgactgtaaagcccattgtaggtacaggtcagctagtgtgctccaatcctccccgt
gaaacccatgagactggcactacaaatactgccaccaccacaacctcacacatgggccaa
gggcagcctgatgatggacaaaaggaaccggctaacacttcctgccaaacaaagcagaca
ggtagcaccagcaccaccatgacgacaaaaacagatattcccacagagcagccatgtgca
gttcaaattgtaagcttcgtgccagatgctggcttgcctagtgttgcttctggcgctacc
acagtgcaaagcggtgaaagactacaagccctgaaaaaagcccagtgtgaatcccatcat
acccataccaccaatactgccactacagctcggtccctcatgggccaagggcagccagat
ggtgaatgggtaggatctgccaaccctccgtgccaaacacagcaaaccaactctaccagc
accaccatgtctgtcaaagttgatgtgccagttcagtcaagtgcaccttgcaagacccat
aatacggataacaaggatacaaatcttcaagtgtgctctaacccagcttgtgaaactcat
gaaacaggtatcacaaatacagctacagtaactacatcaaacctgggtgctacccagcga
gtgtgctccaatccaccttgcgagactcacgaaacgggcaccaccaacacagctaccaca
gcaacttccaacatagccacgggtcagcaggcgtgctccaatccaccatgtgaaactcac
gagactggtactacgaacacagccaccaccaccacatcaaacctgggagctggacaaaat
gaaagtgcccagcaccagcaaccccctgttactccaccctgtgaaacacagcaaaccaac
tccaccagcaccataatgacccccagcataggaggtgatggcgctcagtcttccagctca
gcattagcacaatgtggcaactcagaactgagaaaaacccctgagagagaatcaccaggg
gctgctgggtcttcgcctcagagctcaacacccagaatatgctcaaaccctccttgtgag
acccatgaaacaggaaccactcatactgccaccacagtaacttcttctatgggtgccaac
caagatcagccacctgctaccaatgggcaacaaggggaacctgagatacctgtgactgag
agttcagctgccagcagccccagtgctgttgtggtgaccacagtttccaccactcaaatc
agagctgtcactactgtcacccagtccacgccagcaccagggccttctgtaccgaacatc
tccacgcttgctgatgtccctgcagacgaggcagttccacctgccgaggctcctgatacc
accagcacagattcccttccggcaccctctgagccactgcagtcctccatagagatgcag
acagcagttgcaacccctgagcctcagggacaagcacaggttgcctcagctggcactccg
ccaactgaaggtcctctgggtgaaactgctccccatccagaacttgtccctcctactgaa
gagacaccacccacaccagcagcccccgcccaagaacctgtggctatggtggtgctgccc
caggccacacctgcagctccaccatcctcagaggtggagcagttagcattgcctcaggaa
ctaatggcggagagccaggcaggcaccaccactctgatggtgactggattgactcctgag
gaactagccgtaacagctgctgcagaggctgctgctcaagctgctgccactgaagaggca
caagcgctggccatccaggcagtcttgcaagcagcccagcaggctgtaatgggtcctgga
gaagccatggatacctcggaagcagcagcaacacaggctgaactaggccacctgagttca
gagggccctgaaggacaggccactgcgatccccattgtgcttactcagcaagacttggca
gccttggtgcagcagcaacaacagcagcttcaggaggctcaggcagcagcagcggcggcg
gcggctgcagttcagcagcagcaacagcaacagcagccccctcagcatcaactgcctgcc
cacttgcctacagaagccctggctcctgctgatagcctcaacgatcctgccagtgagagc
aatggcctcaatgagttggctagtgcagtaaccagcacggttgggctgttacctcccact
cccacagagagtcttgctccttcaaatacatttgtggccccacagcctgtggtagtagcc
agcccagcaaaattgcaggcagcagctgccctgacagaagttgctaatgggattgaacca
gctccagtgaaaccagagcctcccacccagcttccaaaagtgattgtgaagaaggaaaat
caatggtttgatgtgggtattgtcaaggcaaccaacatggtggtgacacactacttcctg
ccgcctgatgatgcacctgctacagatgatgattcaggaaccactcctgattattctcaa
ttcaagaagcaagagctgcagcctggtactgcttataagtttcgagtagcaggaattaat
gcctgcggacgaggccctttcagtgaaatctcagcattcaagacctgtttgcctggtttt
cctggagcaccttgtgccattaaaatcagtaaaagtccagacggggcccacctgacttgg
gaaccaccttcagtcacctctggaaaaatcacagaatactcggtgtacctagccatccag
agtccccaggcgggtgaacctaagaccgcagcacctgcccaactggccttcatgcgggtt
tactgtgggcccagtccttcgtgcctggtccagtccgctagtctctccaatgcccatata
gactacaccacaaagcctgccattattttccgcattgctgcccgcaacgagaagggctac
ggtcctgccacacaagttcggtggcttcaagaatccagtaaagatggatctatgacaaaa
ccaactaacaagcggccgctttcatcttctgatctgaaaagtgctccaaagaagcccaaa
gcagatgggcagtga
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integrated database retrieval system
