Crotalus tigris (Tiger rattlesnake): 120301437
Help
Entry
120301437 CDS
T08476
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120301437 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120301437 (L1CAM)
04090 CD molecules [BR:
ctig04090
]
120301437 (L1CAM)
04091 Lectins [BR:
ctig04091
]
120301437 (L1CAM)
Cell adhesion molecules [BR:
ctig04515
]
Immunoglobulin superfamily
L1 family
120301437 (L1CAM)
CD molecules [BR:
ctig04090
]
Proteins
120301437 (L1CAM)
Lectins [BR:
ctig04091
]
I-type lectins (Siglecs)
120301437 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
C2-set_2
fn3_2
Motif
Other DBs
NCBI-GeneID:
120301437
NCBI-ProteinID:
XP_039184614
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MASTPACLLMLWPLVLILCDPAESIKFPEGFDRTNLQQPPEFTTQPDKEIVLYPTDEIIL
KWEAIGNPPVTYRWTKDGEQFDPEQVQGIKQLENSGTLIIHTNNGNVPTRFNGLYRCYAS
NILGTAVSSESHIIVENAPQWPKEEVAPITAEEGTHTVLPCNPPTSADPPKIYWLNSKIE
HIAQDERVTVGQDGNLYFANVQMTDSQPDYICNAHFQGPRLIIQKEPIELKVIPTNTFSY
QKPILVVPESTHKTYVALLGKRLILECIAAGLPTPSVEWIHLNRLNPSPGVTFENYNKTL
CIPSVTEDDDGDYQCIARNEHGSIRHTYTVNVEAAPYWIKMPVSQIYGPGENVRLDCEVD
GKPKPKLSWSINGTPLKDVMPDPRRKIQSGALIFSEVQPNDTAVIQCQAHNKHGSLLANA
YILVVWLPAEILTPDGIEYAVVENQVVILHCKTFGAPRPKVQWFMEDMNPALKDERTFIF
TNGSLKLEEVRREDAGNFTCLAENDQNNVSIIARLVVKGATQIEEGPVNMEKKQGESVMF
YCKVLFDESIPKRGIQWRLNGKDIEESDDNNKYIIGDMSLTVTNVDYSDQGTYSCLAWTT
LDSVEKNANLLVYGKPGPVSNLEVQRQQNHQVKLTWTPGDNHNREINEYIVFCEETKFGP
AEMELLTTVPGNQPWTILHLSPFRSYNFYVQASNDQGKSELSSRSASHATEPAAPERNPS
DVRGEGNETTNMIITWTPLPHKEWNAPKLRYRVQWRLENEDQWEEVEVDDSPVLVTDTPV
FSPYEIKVQAQNDFGKGPEPQTEKGYSGEDVPEAVPEDLLIEMINSTTIKLSWILPNREK
IWGHLKGFRVYYFRLGTLAERSRRQAHLHFHSHGELLILGNVSEVILGGLRPWSRYQVQL
AVLNGRGEGPRSEAMEFVTPEGVPSIPESFQLDYLSDTAVLLEWMPPKFPNGRLLRYVLG
YQQANQTEMDIGNIHIPATQLSLNLSDLDPHTPYKFSLWAETKEGRGEVSLLEEYTMHES
VNLSFVNISLGETGENFTTIIWIPRQNQRDMEFAVHLMSKTDKGQWHDVGKARSGQGSYS
IPDLQPGKQYRVRLVKVHRTGDVQIIWESDVETSGVVQERQKNFAAEGWFIGFISAIVLL
ILVLVLLCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKPFTSSQP
SLNGDIKALGSDDSLADYGGSVDVQFNEDGSFIGQYSGQKGKEGGGNDSSGATSPTNVVT
ALE
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaactccagcctgtctgctgatgctgtggccactggttctgattctctgtgat
ccagcagaatccatcaagtttcccgaaggctttgaccggacaaacttgcaacaaccacct
gaattcacaacacaaccagacaaggagattgttttatatcccactgatgagattatcctg
aaatgggaggctattggaaatcccccagtgacgtaccgctggaccaaggatggagaacag
tttgatccagaacaggtgcaagggataaaacagttggaaaattcagggactctgatcatc
catacaaacaatgggaatgtgccaactaggttcaatgggctgtatcggtgttatgccagc
aacatattgggcacagccgtgagttctgagagtcacatcattgttgagaatgccccacag
tggccaaaggaggaggtggcacccatcacagcagaagaagggacccacacagtcttaccc
tgtaacccacccaccagtgccgatccacctaaaatctactggctcaacagcaagattgaa
cacattgcccaagatgaacgagtcactgtaggccaggatggaaacctctactttgccaat
gtacagatgacggatagtcaacctgactatatctgcaatgcccatttccaaggtccacga
ctcattatccagaaagaacccattgaactaaaagtcatcccaaccaacactttctcatac
cagaaaccaattctagttgtgccagagagcacacacaagacctacgtggccttgttagga
aagcgcttgatactagaatgcattgcagcagggctccctacaccgtcggtggaatggatc
cacctgaacagactgaacccttcacctggggtgacctttgagaactacaataaaactctt
tgcattccaagtgtgacggaggatgatgatggagactatcagtgtattgctcgtaatgag
catggcagcatccgccacacctataccgttaatgttgaggctgctccatactggataaaa
atgcccgtgagtcagatttatggaccaggggagaatgtccgcttggattgcgaagttgat
ggaaaacctaagccaaaactgtcatggagcataaatggaactcctctgaaagatgtgatg
ccagatccaagaagaaagattcaatcaggagctttaatcttcagtgaagtgcaacccaat
gacaccgctgttatccagtgccaagcccacaataagcacggcagtctcctggccaatgca
tacatccttgttgtctggttgccagcagagatcctgaccccggatggcatagagtatgct
gtggtggagaatcaagtagtgatcctacattgcaagacatttggggcacccagacctaaa
gtgcagtggtttatggaagatatgaaccctgccctaaaagatgaacgaacctttatattc
acaaatggatccctgaaacttgaggaagtccgacgtgaagacgcaggaaacttcacatgc
ttggctgagaatgatcaaaacaatgtctccatcattgcccgcctagttgtcaaaggagca
acacagattgaagagggacctgtcaacatggaaaagaagcaaggtgagagtgtgatgttc
tactgcaaagtactgtttgatgagagtattccgaagcgtggtatccaatggcgcctaaat
ggaaaagatattgaggaatcagatgacaataacaaatacatcattggtgacatgtctctg
acagttaccaacgtggactactctgatcaaggaacatacagctgcctggcttggaccacc
cttgactctgtagaaaaaaatgccaatcttttggtgtatggcaaacctggccctgtatca
aatctggaggtgcagaggcagcagaatcatcaggtaaagctgacatggacccccggagat
aatcacaacagagaaataaatgaatatattgtgttttgtgaagaaaccaaatttgggcca
gcagaaatggaattgttaaccaccgtcccagggaaccagccatggactattcttcacctc
tctccattcagaagttataacttctatgtacaggccagcaatgaccaggggaaaagcgaa
ttaagcagccggtctgccagtcatgccacagaacccgcagcacctgagcgaaacccatct
gatgtcagaggagaaggaaatgaaaccactaatatgatcatcacctggacgcccttgcct
cacaaggagtggaatgccccaaagctgaggtatcgtgtacagtggcggctagagaatgaa
gaccaatgggaagaggtggaagttgacgactctcctgtgctggtgacagatacccctgtc
ttctcaccgtatgagatcaaagtgcaagcacagaatgattttggcaaagggcctgaacct
caaactgaaaaaggttactcaggggaggatgtgcctgaggctgtccctgaagatttgctg
attgagatgataaacagcactaccatcaagctttcttggatccttcccaacagagagaaa
atttggggacacctcaagggattcagggtgtattacttcaggttgggaaccctggcagaa
cgtagccgtcgacaggcccatcttcacttccattcccacggggagctgctgatcttgggg
aatgtgtctgaagtcatactggggggcctcaggccctggagccggtaccaggttcagctg
gcagtgttgaatgggcggggggaggggccccgcagcgaggccatggagtttgttacacct
gagggagtacctagcatccctgaatcctttcagttggactacctctcggacacagccgtg
ttgctagagtggatgcctccaaaattccctaatgggagattactgagatacgtgttggga
taccaacaagccaatcagacagagatggacattggcaacatccatatcccagccacccag
ttaagcctcaatctcagtgaccttgatccccacactccctataaattctccttgtgggca
gaaaccaaagagggtcgaggagaagtatccttacttgaggaatatacaatgcatgagtca
gtgaacttgtcttttgtaaacatcagtttgggcgagacaggagaaaacttcaccaccatc
atctggatcccacgtcagaaccagcgagatatggagtttgcagtccatcttatgagcaaa
acagacaaaggacagtggcatgatgtaggaaaggccagatctggccagggctcatacagc
attccagatttgcagccaggcaagcagtatcgtgtccgactggtgaaagtacatcgaact
ggggacgttcaaatcatttgggagtcagatgtggagaccagtggtgtggttcaagagaga
caaaaaaactttgctgcggaaggttggttcattggatttatcagtgccattgtcctcctc
atcctggttctggtgctcctctgcttcatcaagcgcagcaagggcggcaagtactcggtg
aaagacaaagaagacacgcaggtggattcggaggccaggcccatgaaggatgagaccttt
ggagaatacaggtccctggagagtgacaatgaggagaaacccttcaccagcagccagccc
tccttgaatggtgacatcaaggctctggggagtgacgatagcttggcagattatgggggc
agtgtggacgtccagttcaatgaggatggttccttcattggccagtacagtggccaaaaa
ggcaaagaaggaggtggaaatgacagctctggggctaccagtcctaccaatgtggtcact
gccctggaataa
DBGET
integrated database retrieval system
