Crotalus tigris (Tiger rattlesnake): 120301504
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Entry
120301504 CDS
T08476
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctig03009
]
120301504 (DCAF13)
04121 Ubiquitin system [BR:
ctig04121
]
120301504 (DCAF13)
Ribosome biogenesis [BR:
ctig03009
]
Eukaryotic type
90S particles
Other 90S particles
120301504 (DCAF13)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120301504 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
MIOS_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
120301504
NCBI-ProteinID:
XP_039184824
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MRVKGLSRNPDHYVRETKQDLQRVPRNYDPALHPFEIPREYTRALNATKLDRIFAKPFLA
SLDGHRDGVNCIAKHPQSLSTVLSGACDGEVRIWNLMKRVCIRTLQAHEGFVRGMCTRFC
GTSFFTVGDDKTVKHWKMEEPAYGEAEEPINTILGKTVYTGIDHHWKKPIFATCGHQVDI
WDEQRTSPICSLTWGVDSINSVKFNPIEMNLLGSCTSDRNIVLYDMRQSTALKKIILDMR
TNTLCWNPMEAFIFTAANEDYNLYTFDMRFLGKALMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPADKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLAPRERAAINYNQKLKEKFQHHPQIRRINRHRHLPKMIYSQAKELRIMKEARRRKELN
RRKHSKPGSIPLVSEKEKHIMAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaaggtctcagcaggaaccccgaccactacgtgcgcgaaaccaagcaggac
cttcagcgggttccacgaaattacgatcctgcattacatccatttgaaattccacgggaa
tacacaagggcactaaatgcaactaaattagatcgtatatttgcgaaaccttttcttgca
tcattagatggtcatcgggatggagttaattgcatagctaaacatccacagagcttgtct
acagttctgtctggagcatgtgatggagaggttagaatctggaacttgatgaaacgtgta
tgcatccgtacattgcaagcacatgagggctttgtaagaggaatgtgtacccgtttttgt
ggcacctctttcttcactgtaggtgatgataaaacggtgaagcactggaaaatggaggag
ccagcttatggggaagcagaagaaccaataaataccattcttggaaagacagtgtacact
ggaattgatcatcattggaagaaacctatatttgctacttgcggtcatcaagttgatatc
tgggatgaacagagaactagtcctatatgttctttgacttggggagtcgatagcataaac
agtgttaaattcaatccaattgagatgaatcttttgggaagctgtacttcagacagaaat
attgtgctatatgatatgagacaatcaactgccctaaaaaagattattttggatatgaga
acaaatacactttgctggaatcccatggaagctttcattttcactgcagcaaatgaggat
tacaacttatatacttttgatatgcggttccttggcaaggctttaatggttcatatggac
catgtgtctgcagtcctggatgtagattattcccctacaggaaaagaatttgtgtcggcc
agctttgataaatctattcgcatttttcctgcagacaaaggtcatagcagagaggtctat
catacaaagagaatgcaacatgtcatcactgtcaaatggacatcagacaataagtacatt
ttgtgtggctctgatgaaatgaacattcgtttgtggaaagcaaatgcttctgaaaagctg
ggtgtgcttgctcctcgagaaagagctgctattaactataatcagaaactgaaagaaaaa
ttccagcatcatccccaaatcagacgtataaatcgccatcgtcacttaccaaagatgatc
tatagtcaagccaaagagctacgcattatgaaagaagctcgtcggcgaaaggaactgaac
cgtcgtaaacacagcaagcctggatctataccacttgtgtcagaaaaggagaaacacatt
atggctgtagtaaaataa
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