Crotalus tigris (Tiger rattlesnake): 120301570
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Entry
120301570 CDS
T08476
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120301570 (SHOC1)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120301570 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
120301570
NCBI-ProteinID:
XP_039184914
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MKRKPISNTAFHTPSEDFEIIPSSNPCSQFSTEDYMLMKEELDKEELADRNRLQLDYFPV
ALKEGLYIEEELVFTNNLTQSAKRLPTLQTLLSRLSVFQVQDPLLNFKGDSFIEEDILRE
CLTFRRSVTPQEKGMELSEDFCKVSLKDEEIPLFLVNFQFCEATNAKLDKEILTCLALKS
SLQITPEILEDENECVRITNEKLNMTIIPEMIKSSKHYFTQEVYSSQGKDLPEFNNPINY
IGELEVPLTPLCRKENMHMNSLYVHLKPEPVSPINKSDFITESTSNYLEGLMWQSEKYQN
AMTSLFLIVPQTSMAICQQLSVTELKTKLSIHENSMTAGLLEEDEWINLRENLTVPCVLE
ALSINVNDERRLDNMNIEDFSKITNFQLDKWLDDKNPYCDSNMKIFSIPHYTGTKDFYSP
KKNETFSLLPLTPTSLQYGISTANNNVSTENNIKQTKSQNEIEKPVQIESHEVEKNNQLV
SCKKVSISANSTLRSNKSALSEQPRKCKDDFDLLSNFIMLRSKQVISQSEEGNNVDIQEE
VFDAEEEQPSLESHKSPGVPGMTVPVENLHRHMENQSKDNHTLAFIKIKTSECQSQAYHI
LEAAAAPVLKELIKLDMQNWRFATLNSDNTRFFLKQQEKVIGDTLKQGSKEAKYILAFRH
AAILHLLVTVRDLLLTCNLNTALEYLSKTKDYYKDFQDYDLDIIWKQLKIVEFVVQEHKV
SPKVTELQHQISKWLQNNVNDQNKVVIVIRMDFDEETEVLINTINTVQGLKAIYLNSKKR
GMLFESKHIINSLDVYSCIIVNNQHIGPDFPWTSFSLVIEYNYNENSCWIDLCKKMNIPY
LIFQTVPPEAIETEEFLSENLGYDLLRLSIPYVFLTSEGLLNTPEILQLLESKYNITLIE
RNCCEALNYFGGTEHYVVMTIDECTAIVMQNMEELNYENSSNNIVLRLMALSLQYASCWI
ILYSRERLNSKYSLTGKSLHHLALIYAALISFAQKSEDFEVKMALTPGVEETALLVRQIA
DHVLLASKQHPQEWLNKSWLSVLLSEAEKCLLTFPCMNPLVAQVMLKKSSSLGWLLAASF
AELQELLPEVPEKVLKTFSDITSLYIFKPLTQKEITPLQGNINSATSSRSQLPFLEALFS
RFQGHSSFTEYSEEQNKNYSPDIGQNGSCGSLKSTEEHNLDLPSISYGDTCPFQDSVRVE
RQLYLPFLKKVETETRINASHLTLNNIGGSSHNNNETTVPYLHCNQDSGPYIENCPLNRI
TVSKVDTGKQLDISEFLKKPIYHDAKNEHLGKIQPLVQQLNFFHDFKHSPHFVSSRNDVL
FQQSSGNFLEIGRKASSNPETEERYWGNPPFIQAMDSFPCDSHAGKTISSPDRFMNLDIQ
FTGEYRRGKGSNSLSDEQRQQDVSGSEVMQLPQLKKRRLTFEKDPRRHDGQTRLKFF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaaacccatttcaaatactgccttccatactcctagtgaagattttgaaatt
attccaagttcaaatccttgttctcagtttagtacagaagattatatgcttatgaaagag
gaacttgacaaagaggaactagctgatagaaatcgactgcagctggattattttccagtt
gcacttaaagaaggtttatatattgaagaagaacttgttttcactaataatttgacacag
tctgctaaacgtctacctactctgcaaacactcttgagtcggctaagtgttttccaagta
caagatccccttttaaattttaaaggtgacagtttcatagaagaagacatattgagggag
tgcttgactttcagaaggagtgtgacacctcaagaaaaagggatggaattaagtgaagat
ttctgcaaagtttctttaaaggatgaagagattcctttatttcttgttaattttcaattc
tgtgaagcaacaaatgcaaagctggataaggagattctcacatgtttagccctaaaatct
tcattacaaataactccagaaattttagaagatgaaaatgaatgtgtcagaataactaat
gaaaaacttaacatgacaattataccggagatgataaagagctcaaaacattactttact
caagaggtttattcgagtcagggcaaagatctaccagaattcaacaatccaataaattac
attggagaacttgaggtgccattaactcctctatgtaggaaagaaaatatgcacatgaat
tcattgtatgtccacttaaaaccagaacctgtttctcccattaataaaagtgatttcatt
acagaatctacttcaaactatttggaagggcttatgtggcagtcagagaaataccagaat
gctatgacttcacttttcctaatagtacctcaaacttctatggctatatgtcaacagttg
tcagtcacagaactgaagacaaagttgtctatacatgaaaattccatgactgccggactc
ttggaagaagatgagtggattaatttaagagaaaacctgactgtaccgtgtgtcttagaa
gcactgagcataaatgtaaatgatgagagaagacttgataatatgaatattgaagatttt
tccaaaattactaatttccagttagacaaatggcttgatgacaagaatccctactgcgac
agcaacatgaagattttcagtatccctcattatactgggaccaaggatttttattctcct
aaaaaaaatgagactttttctttactacctctgacacctacttcactacagtatggtatt
tctacagccaacaacaatgtatctactgaaaataatatcaaacaaaccaaatcacaaaat
gaaattgaaaagccagtgcagattgaaagccatgaagtagaaaaaaacaatcaattagtc
agttgcaagaaagtctctatctcagcaaatagtacattaagaagcaataagtcagctcta
tctgaacagcctagaaaatgtaaagatgactttgatcttttgagtaattttatcatgctg
agatctaaacaggtgatcagccaaagtgaggaaggaaataatgtggatattcaagaagaa
gtatttgatgctgaggaagaacaaccttcacttgaaagccacaaaagtcctggtgttcct
ggcatgacagttcctgtggaaaacctccatagacatatggaaaaccaatcaaaagacaat
catacattagctttcatcaaaattaaaacatcagagtgtcagtctcaggcatatcatatc
ctggaagctgcagcggctccagttttgaaagaacttataaagcttgacatgcagaattgg
agatttgccacacttaattctgataatactaggttttttttgaaacaacaagagaaagtg
atcggtgacacattgaaacaaggtagcaaagaggcaaagtatattttggcattcagacat
gctgctattcttcatttgctggttacagttcgtgatcttttattaacctgtaacttgaac
actgcattagaatatctgtccaagacaaaagattattataaagatttccaagactatgac
ctggatattatttggaaacagctgaaaattgtggaatttgttgtgcaggagcacaaagtc
agtcccaaagtgacagaattacagcatcaaatttctaagtggttacagaataatgtaaat
gatcagaataaggtagtaattgtgattagaatggattttgatgaagaaacagaagtcctg
atcaataccattaatacagtgcaaggcttgaaggccatatatttgaattctaagaaaaga
ggaatgttgtttgagagtaaacatataataaatagtttggatgtatattcttgtatcatt
gtaaataatcaacatattgggcctgatttcccctggaccagtttttcattggtgatagag
tacaactacaatgagaattcctgttggattgatctatgtaaaaaaatgaatataccttac
ttaatttttcaaacagttcccccagaagcaattgaaactgaagagtttttgtctgagaat
cttggatatgatcttctgaggttgtcaattccatatgtttttttgacatctgaaggactt
ctcaataccccagaaatccttcagttactggaatccaagtataatattactttaattgaa
agaaactgctgtgaggccttaaactattttggaggcacagaacattatgttgtgatgact
atagatgaatgcacagctattgttatgcagaacatggaagaactcaattatgaaaactcc
tctaataatattgtcttaagactgatggcgctatcactccagtatgcctcctgttggatt
attttatactccagagaaagattaaattctaaatacagcctaactggaaaatccctgcat
catcttgctttaatttatgcagccttgatttcttttgcacagaaatcagaagactttgaa
gtgaagatggcccttacaccaggagttgaagaaacagcacttttggttcgccagatagct
gaccacgtattattagcttctaaacaacatccacaggagtggctaaacaagtcatggctt
tctgtcctgctatcagaagcagagaaatgcttgcttacatttccatgcatgaatccacta
gttgctcaagtcatgctaaagaaaagttcttcactgggatggctactggcagcatctttt
gctgagcttcaggaacttctgcctgaggtgccagaaaaggttttgaagacttttagtgac
atcacatcattatacatcttcaagccactaacgcaaaaagaaattacgcctcttcaagga
aatattaattctgccaccagctctcgttctcaacttccatttcttgaggctttgttctcc
agatttcaaggacatagttcctttactgagtattcagaagaacagaacaaaaactattcc
ccggatatcggccagaatggatcttgtggctctctgaaatcaactgaagaacataactta
gatctaccttcaatatcatatggagacacctgtccctttcaggatagtgtaagagtagag
aggcagctttatctcccatttctgaaaaaagtggaaacggaaaccagaataaatgcatcg
catttaacactgaataatattggaggatcttcccataacaacaatgaaaccacagtgcca
tatttgcactgtaaccaggactctggcccttatattgagaattgcccactaaatagaatt
actgtttcaaaagtggacacaggcaaacagctagatatctctgagttcttgaagaagcct
atttatcatgatgctaaaaatgaacatctgggaaaaattcaacctcttgtgcaacagctg
aattttttccatgatttcaagcattctcctcacttcgtttctagtagaaatgatgttctg
ttccagcaaagctcaggcaattttttagaaataggaagaaaagcaagcagcaatcctgaa
acagaggaaagatattggggtaaccccccattcatacaagcaatggattcttttccctgt
gattcgcacgcaggcaaaaccatatccagtccagacaggttcatgaacttggatattcag
tttactggagaatataggagggggaaaggatctaattcattatcagatgaacaaagacaa
caagacgtttcaggttcggaagttatgcaattaccacagcttaaaaaaagacgtttaaca
tttgaaaaagatcctaggaggcatgacggccaaacacgtctcaagtttttttag
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