Crotalus tigris (Tiger rattlesnake): 120301653
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Entry
120301653 CDS
T08476
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04514
Cell adhesion molecules
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120301653 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120301653 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctig00535
]
120301653 (SDC3)
Proteoglycans [BR:
ctig00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
120301653 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
ECF_trnsprt
Motif
Other DBs
NCBI-GeneID:
120301653
NCBI-ProteinID:
XP_039185100
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MSRLLPSRPRSQAGLPPPLLLLLLLAGHIARAQQWRNENFERPIDMEGSGDDYSFEDEEL
EEMEDFYSGSGSGYFKQDPESKTVVRLTTDSPILLATTSAVLPVTSVQPVATPLAPLPTE
EVISNSATNGLYIPRISETPAVTIWKAVGVTATTAARDVTTTTTTTAAAATAAAAAASTM
ATTASTTTVTSKPTTALRDLLPVITIVAVTQSMMLETPTVARTEIPASPVGTSETKVRDT
SQLSTSQEPDVTTMPQPPTATPTDAAQAEPMETSLPTVTVNELEVPISGDFEIHEEEVAQ
TELGNEVVPLVTPAAGPGLKKKMEPGLLDNTIESGNSAAQLPQKNILERKEVLIAVIVGG
VVGALFATFLVMLLIYRMKKKDEGSYTLEEPKQSSSQGVLLPSTLALNMPLRNLSERTAL
NLNSCQDQHNGQPITLVKDLF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggctgctgccgtcgaggccccgcagccaggcagggctgccgccgccgctcctg
ctcctcctgctcctggccggccacatcgcccgggctcaacagtggcggaatgaaaatttt
gaacggcctattgacatggaaggctcgggggacgattactcctttgaagatgaagaacta
gaggaaatggaggacttctattcgggatctggctcgggatatttcaagcaggaccctgaa
tccaagacagttgtgcgactcaccacagattcacccatccttcttgctaccacctcagct
gtgttgcctgtcacatctgtgcaaccagttgccacccctttggcaccactccctacagag
gaagttatttctaattcagctaccaacggtctgtacatccccagaatttcagaaacacca
gcagtcaccatctggaaagcagtaggtgttactgcaactactgcagcccgcgatgtcact
actactactactactactgctgctgctgctactgctgctgctgctgctgcttctactatg
gctacgacagcctccaccacaacagttacctctaaaccaacaactgccctgagggacctg
ctgcctgtgatcacaattgttgctgtgacacagtcaatgatgcttgaaaccccaactgta
gccagaacggaaattccagcttctcccgtggggaccagtgagacaaaggtcagagataca
tcacagctcagcacttcacaggaaccagatgttacaacaatgccccagcctcctacagca
acaccaacagatgctgctcaggcagaacccatggaaacgtcccttcccacagttacagtg
aacgaacttgaagttcccatcagtggggacttcgaaattcatgaggaagaggtagctcag
accgagcttggcaatgaagtggtgcccctggtcacccctgcagccgggccaggattgaaa
aagaaaatggaaccagggctcctagacaatacaatagagtctggaaattcagcagcacaa
ctcccccagaaaaacatattggaaaggaaagaagtgctcatagctgtgattgtgggaggg
gtcgtcggggccctctttgccactttcctggtgatgcttttgatctaccggatgaagaag
aaagatgaaggaagctacacgctggaagagcccaaacagagctcttcacagggagttctc
ttgccatcaactcttgctctgaacatgccactgagaaatctttcagaaagaactgcctta
aatcttaattcatgtcaggaccagcacaacggacagccaatcactctggtaaaagattta
ttttga
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