Crotalus tigris (Tiger rattlesnake): 120301889
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Entry
120301889 CDS
T08476
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120301889 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120301889 (PRPF38B)
Spliceosome [BR:
ctig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120301889 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
120301889 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120301889
NCBI-ProteinID:
XP_039185570
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MANNCPLVGPGNCHPLPPHQSPQQQQHQGILQQQQAGAVLSPPLALQSAGPKPAASGKQG
NALPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIFFKVTHVEPWEKGSR
KTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHIDSPYIRALGFMY
IRYTQPPKDLWDWFESFLDDEEDLDVKAGGGCMMTIGEMLRSFLTKLEWFSTLFPRIPVP
VQKNIDQQIKARPRKIKKDGKEGVEEVDRHAERRRSRSPRRSLSPRRSPRRSRSRSHHRE
GRGSSSFDRELERERERQRLEREAKERERERRRSRSADRALERRRSRERHRSRSRDRKGD
RREREKENERNKRKDRDHDKERGVERERDRSRERDHSREKSKDRKGKSEGDERRHKDEKD
ERKHKDEKRDAKKERRHSRSRSRDRKHRSRSISRNASKHSRSGSKDKSSKHKSGSKEKSN
KQSRSRSRGRTDSSEKSRKRDRSPSKERSRKRSKSKERSHRYDHSDKDHSDKRDQRSQST
EQENQEKQSKNKDETV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccaataactgccccctcgtgggccccggcaactgccatccgctgccgccgcaccag
tcgccgcagcagcagcagcaccaggggatcctgcagcagcagcaggccggcgccgttttg
tcgcccccgttagcgctccagagcgccgggcccaagccagccgcctcgggcaagcaaggc
aacgctttgcctctgtgggggaatgaaaagaccatgaacctaaaccccatgatcctcacc
aacatcctctcgtccccttacttcaaggtgcaactttacgagctgaagacctaccacgag
gtggtcgacgagatctttttcaaggttacccatgttgagccttgggagaagggaagcaga
aaaactgcaggtcaaacagggatgtgcggaggggtgcgaggagttggaactggaggtata
gtgtctacagccttttgcctcttgtacaagttatttactttgaagcttacccgtaagcaa
gtgatgggactaataactcatatagattccccatacattagggcccttggattcatgtat
attaggtacacacaacctccaaaagatttatgggactggtttgaatcctttctcgatgat
gaggaggaccttgatgtgaaagcaggcggcggctgcatgatgactattggagaaatgctg
cgctcttttcttactaagcttgaatggttttctacattatttccgaggattcctgtaccg
gtgcaaaagaacattgatcaacaaattaaagccagacctagaaaaatcaagaaggatggc
aaagagggcgtagaagaagtagacagacatgcagagcgtagacgttcaaggtctccaaga
agatccttgagtcctaggaggtcacctagaagatcaagaagcagaagtcatcatcgggaa
ggacgtggttcatccagttttgatagagaattggaaagggaaagagagcgacaaagatta
gagcgtgaagctaaggagagagagagggaaaggcgacggtctcgaagtgctgatcgcgca
ttggaacgtaggcgaagccgcgaaaggcacagaagtcgcagccgtgaccgaaaaggagac
agaagagagagagagaaagaaaatgaaaggaataaaaggaaggaccgtgaccatgacaaa
gagagaggtgttgaaagagaacgagatcgctctagagagagagatcattctagagaaaaa
tcaaaagacagaaaaggtaaaagtgaaggagatgaaaggaggcacaaagatgaaaaagat
gaaaggaagcataaagatgaaaaaagagatgccaaaaaagagaggaggcatagccggagt
cgaagtagggatcgtaagcataggagcagaagtataagcagaaatgctagcaagcatagt
agaagtgggagtaaagacaagtcaagtaaacataaaagtggaagtaaagagaaatcaaat
aagcagagcagaagccgaagcagaggaagaactgatagcagtgaaaagtctcgaaaacga
gaccgtagtcctagtaaagaaagatcacgaaaacgtagcaaaagcaaagaacgttcccac
agatatgaccacagcgataaggaccactcagataaacgcgatcagaggagccaaagtaca
gaacaagagaatcaagaaaaacaatctaaaaacaaagatgagactgtataa
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