Crotalus tigris (Tiger rattlesnake): 120301961
Help
Entry
120301961 CDS
T08476
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04512
ECM-receptor interaction
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120301961 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120301961 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120301961 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctig00535
]
120301961 (COL9A2)
Proteoglycans [BR:
ctig00535
]
Extracellular matrix (ECM) proteoglycans
Others
120301961 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120301961
NCBI-ProteinID:
XP_039185746
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MARLLELCLLQSFVFSLGQLQGPPGEPGPRGPPGPPGVPGSDGIDGDKGPPGAAGVPGAK
GDPGLPGPDGAAGKPGIDGVTGAKGESGRVGGPGLKGQPGLPGPPGLPGPGVPGPPGPPG
QVGLPGEMGPLGLKGERGPDGPQGPPGPPGKPGPIGRIQGAEGSADFVCPTNCPPGLKGP
PGLQGLKGHRGRSGASGEPGRQGRPGPKGDVGLSGEQGILGPPGAEGPRGHPGMAGPKGE
MGPQGYKGMTGSIGAVGPPGEDGPRGPPGPIGEKGELGPRGFRGSQGEMGPKGTRGLPGI
DGKDGFPGTPGVKGSVGQPGLPGPLGHRGVAGLPGTPGSKGGPGEKGQLGARGPSGLPGP
SGKIGEPGPAGAVGPQGSAGLKGDPGERGPTGPPGPQGKVGPKGEQGPPGIPGPQGLPGV
KGSKGFPGKSGSKGDVGDPGVEGLSGEKGQKGELGEPGPKGQQGIRGEAGFPGPPGDIGA
PGVRGFPGSPGPRGPNGERGVPGIPGLRGAPGRDTGDQHIVEVVVKMLQEQLAELAVSAK
REALGGSGTMGPPGPPGPTGSPGPQGPHGHPGSRGLPGIIGAVGQIGNTGPKGKRGEEGD
QGEPGHGHQGMPGPPGIPGPPGPPGQALNGKHGERGVPGAPGEAGRPGLPGPPGLPGFCE
AVVCLGASASAQLTEVGSVKGPSY
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattactggaattgtgcctcctccaaagctttgtcttctccttagggcagttg
caaggtccgccaggagaacctgggccacggggccctccaggcccacccggtgtgccagga
tcggacggcattgatggtgacaaaggtccacccggtgcagcaggtgttccgggagcgaaa
ggagatccaggcctgccaggaccagatggagctgcaggaaaacccggaatagatggcgtt
acgggagcgaaaggagagtcaggccgtgttgggggaccaggtctcaaaggccagcctggg
cttccaggaccaccagggcttccaggacccggagttccagggcctcccggacccccaggt
caagttggacttcctggagaaatgggacctttgggacttaagggggaacgtggaccagat
ggaccacaagggcctccaggacctcctggaaagccaggcccaattggtcgcatccaagga
gctgagggcagtgctgatttcgtgtgtccaaccaactgcccacctggactcaaggggcct
ccaggtttacaggggttgaagggacacagaggccgatcaggagcttctggagagcctgga
agacaaggccggccgggtccaaagggtgatgtgggcctgtctggggaacaaggcattctg
ggtcctccgggcgcagaaggaccccgtggacatccaggaatggcagggccaaaaggggag
atgggtcctcaaggttacaaaggcatgactgggagtattggagctgttggtcccccgggt
gaagatggtcccaggggccccccaggaccaattggagagaagggagaacttggtcctcgt
ggattcagaggttctcagggcgaaatgggccccaaaggaacacgggggcttcctgggatt
gatggcaaagatggatttcctggcactcctggggtgaagggaagtgtgggtcaaccaggc
cttccagggcctctgggacatagaggagtggctggtttgccaggcactcctgggagcaaa
ggtggtcctggagagaagggccagctcggggcacgtggtccatcaggcttacctgggcca
tctggaaaaattggagagccgggtccagcaggagcagtgggtccccaaggcagcgctggc
ttgaaaggagatccgggtgagagggggcccacaggacctccagggccacagggaaaagtg
ggccctaaaggcgagcagggcccgcctggaattccggggccacaaggcctccctggagtt
aaaggcagcaagggcttcccaggaaaaagtgggtccaaaggagatgttggggatcctggt
gttgaaggcctttctggagaaaaggggcagaagggtgaattgggtgaacctggaccaaag
gggcagcaaggtatccgtggggaggctggttttcctggacctcctggagacatcggagca
cctggagtcagaggtttcccaggatctcctggccctcgaggacctaatggggaacgtggc
gtacctggaatacctgggttgcgaggtgccccaggcagggacaccggagaccagcatatt
gttgaggtcgtggtcaaaatgctgcaagaacaactggctgagttagctgtgagtgcgaaa
agagaagctttgggtggaagtggcacgatgggaccacctgggccaccagggcctactgga
tcacctggcccccaaggcccccacggacatccaggttcccgtggtcttccaggaatcata
ggagctgttggacagataggcaacaccgggcccaaaggaaagaggggtgaggaaggagac
cagggagaacctggccatggtcatcaagggatgccagggcctccaggcataccaggtccc
cctggtccccctggtcaagctctcaatggcaaacatggagagcgaggtgttccaggtgct
ccaggagaagccggacgtcctggtttacctggacctccgggccttcctgggttttgcgaa
gcagttgtctgccttggggcctctgcctcagctcagctaactgaagtaggttccgtcaaa
ggaccttcatattga
DBGET
integrated database retrieval system
