Crotalus tigris (Tiger rattlesnake): 120302179
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Entry
120302179 CDS
T08476
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120302179 (PCDH19)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120302179 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
120302179
NCBI-ProteinID:
XP_039186154
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MDILCPLLQFLLAVWWTGVGALINLKYSVEEEQRAGTVIANIARDARDAGFVLDPRQPTA
FRVVSNSAPHLVDINPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIK
DLNDNAPSFPTDQIALEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKT
RGDGSRFAELVVEKSLDRETQSHYSYMITALDGGDPPNFGTVELTIRVIDSNDNNPLFEE
PSYTVSVLENVPPGTPVIRLNATDPDEGTNGQVLYSIHSYVSEKARDLFQINSQTGLITV
TGAIDYEEGHAYELDVQAKDLGPNSIPAHCKVTVTIQDANDNPPLINLLSVNSELVEVSE
NAPPGYVIALVRVSDRDAGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYN
LTIQAKDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKSFEFKVLAKDGGN
PSLQSNATIRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGEN
GRLSYEMAEGDRGFFEIDQVNGEIRTTRAFGENSKTTYELIVVAHDHGKTSLSASALILI
YLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNNRNAGSNHNYHHTFTGQGPQQPDLIINGMPLPETENYSFDSNYVNSRA
HLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDAQRGLYCDTAVNDVLNTSVTSMGSQVP
EQDQSEGFHCREECRILGHSDRCWMPRNPAPARAKSPEHGRNVMSLSIGASSVDTELYED
SSTKRTFATFGKDRSEPVSEERGPVTVKGKRTLDPPICSPKVNGAVREAGNGCEAISPIT
SPVHLKSPSSSKALVSYSIFHCPSSRDLEPFVTNGPSRPMEAEPRGLDSETTVHEINPLL
QECREKDSPGVKRLKDIVL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggatattctctgccccctgctccaatttctgctcgctgtctggtggactggtgtaggg
gctctgatcaacttgaagtattcggtggaagaagagcaaagagctggcactgtgattgca
aacattgccagagatgcccgagacgcgggatttgtgctggatcctcgccaacccacggct
ttccgagtggtgtccaactcggcaccgcacctggtggacatcaaccctggatcggggtta
ctagtgactaagcagaagattgaccgggacttactttgcagacaaagccccaagtgtgtg
atctctttagaggtcatgtcgagctccatggagatctgcgtgatcaagctggagatcaaa
gacctcaatgataacgctcccagttttcccaccgatcaaattgcgctggagatctccgag
acagccagcccggggaccagggtaccacttgaaagtgcttacgatccggactcgggcagc
tttggggtgcagagttatgagatcacccccaacgatctctttggcttggaaaccaaaacc
cgaggggatggttctcgctttgccgagctggtggtggagaagagcctggaccgagagacc
caatctcattacagttatatgataacagctttggatggtggtgacccgcccaactttgga
acggtggagttaactatcagagtcattgactccaatgacaataaccctctctttgaagaa
ccgtcttacaccgttagtgtgctggagaacgttcctccaggcacaccagtgatccgcctc
aacgccactgaccctgatgagggcaccaatgggcaagtcttgtattccatccacagctat
gtctctgagaaggccagggacctcttccagatcaactctcagacaggcctgatcacagtc
actggtgcgattgactatgaagaaggtcacgcctatgaactggatgtacaggctaaagat
ctgggtcccaactccatcccagcacactgcaaagtgaccgtcactatacaggatgccaat
gacaacccccctctcattaacttgctctctgtgaatagcgagctggtagaagtcagtgag
aacgcacctccaggctacgtcattgccttggtgagagtttctgacagggatgctggggct
aatggccgcgtgcagtgtaaactgttgggcaacgtaccctttcgcttgcaggaatatgag
agtttctccaccatccttgtggatggacgtttagacagagagcagagggaccagtacaat
ctcaccatccaagcgaaggacaatggaatcccatctttgcaggccaccaagtcctttacc
gtcaagatcacagatgagaatgataaccaccctcacttctccaaaccttattaccaagtc
attgtgcaggagaacaatacccctggggcctacctcctttctgtttctgccagggatcct
gatcttggtctaaatggcagtgtctcctatcagattgtcccatcccaagtaagggatatg
cctgttttcacctatgtctccatcaatcccaactcgggggacatctatgctttgagatcc
ttcaaccatgagcagaccaaatcctttgagttcaaggtcttggccaaagatggaggcaac
ccttccttgcaaagcaatgccaccatccgagtgattgtcctggacgtcaacgacaacact
ccagtgataacagcccctcctttagtcaatgggactgcagaagtctatatccccaggaat
gctggggttggctacttggtgaccgtggtcaaggcagatgactacgacgaaggggagaat
gggagactttcctatgaaatggctgaaggggatcgaggtttttttgagattgaccaggtc
aatggtgagataaggaccaccagagcattcggggaaaattccaagacaacgtacgagctg
attgtcgtggcccacgatcacgggaaaacatcgctttcagcatctgccttgattttgata
tatctttctccggctctggatgcccaagaatccataggatctgtaaatttgtccctgatt
tttattattgctctgggttcaattgctgccatcctgtttgtgaccatgatcttcgtagca
gtcaagtgtaaacgggataacaaagaaatcaggacttacaactgcagaattgcagagtac
tcctacgggcaccaaaagaaatcctccaagaagaaaaaaatcagcaagaatgacatccgc
ttggtgccccgggatgtagaggagacggacaaaatgaacgttgtcagctgctcctccctg
acctcctccctcaactactttgactatcaccaacagactctgcctctgggttgccgccga
tcggaaagcacctttctcaacgtggagaatcaaaacaaccggaacgctggctctaaccac
aactaccaccacaccttcacgggccagggaccccagcagccggatctcattatcaatggg
atgcctctcccagagaccgaaaactactcctttgattccaactatgtgaacagcagagct
catttaataaaaagcagctcaaccttcaaagatttggaggggaacagcttgaaggacagc
gggcacgaagaaagtgaccagacggatagtgaacacgatgctcagcggggcctgtactgt
gacacagctgttaatgatgttttgaataccagtgtcacctccatggggtctcaggtgcct
gaacaagatcagagtgaaggattccactgtcgagaagagtgtcggatccttggccattct
gaccgatgctggatgccccggaatcctgcccccgcccgggccaaatctcctgaacatgga
aggaacgtcatgtccctctctataggagcttccagtgtggatacagagctttacgaagac
tctagcacaaagagaacttttgcaacttttggcaaagacaggagtgaacccgtttctgag
gaacggggcccagtcactgtcaaaggtaaaaggacattggatccacccatctgtagccca
aaggtgaacggggccgtccgggaggctgggaatggttgtgaagctatcagtcccatcacc
tcgcccgtccatttgaagagtccctcgtccagcaaagcgttggtgtcctatagcatattt
cactgcccgtccagtcgcgacttagagccgtttgtaaccaatggtccctccaggcctatg
gaagcagagccgaggggcttggacagtgagaccacagtgcatgaaattaaccctcttcta
caagaatgtagagagaaagactcacccggcgtgaagaggctaaaggatattgtactctaa
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