Crotalus tigris (Tiger rattlesnake): 120302376
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Entry
120302376 CDS
T08476
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120302376 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120302376 (DHX36)
03012 Translation factors [BR:
ctig03012
]
120302376 (DHX36)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120302376 (DHX36)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120302376 (DHX36)
Translation factors [BR:
ctig03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120302376 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
Ntox8
AAA_14
AAA_23
NPHP3_N
RsgA_GTPase
Sir1
Motif
Other DBs
NCBI-GeneID:
120302376
NCBI-ProteinID:
XP_039186559
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MSYEHRRAWGRRDGSRASQSSSSSSSSSSGGGGRGCGGGGGGRSRPPPHLKGREIGLWYA
RRQGDRSKEAERQQRAVVHMDEHREEQIVQLLNTVQNKNEKEQEAMSWWSDEEGYTKEVP
TKTKPVVENPVVEKAPERRRPALEKSFLVQDSEYLLQENMPDSDLDEQFKEELRKKKSDS
RYIEMQRFREKLPSYSMRKELVNLINNSRVTVISGETGCGKTTQVTQFILDDYIERGKGS
SCRIVCTQPRRISAISVAERVAVERAESCGNRKSIGYQIRLESRLPRRQGSILYCTTGIV
LQWLQSDKQLSSISHVILDEVHERNLQSDVLMAIIKDLLNVRLDLKVILMSATLNAEKFS
DYFDGCPMIHIPGLAYPVKEYLLEDVIEKLRYMPENTDRRPHWKKRFMQGHICRPEKEEK
EEIYHEQWPDYVKQLRTRYSETTIDALEMMDDDKIDLDLIAALIRYIALEEEEGAILVFL
PGWDNISTLHDLLVSQVMFKSDRFVIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAE
TSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLY
NGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIANFLMNLMDPPSHDAVLLSIKHLK
ELNALDRQEQLTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAGLSFKDPFIIPL
GKEKLADARRKELSRNSKSDHLTVVNAFKGWEEAQRRGFRYEKDYCWEYFLSSNTLQMLR
NMKGQFAEHLLAAGFVNSRNPRDPKSNINSENEKLLKAVICAGLYPKVAKIRANFSKKRK
MVKVSTKTDGTVNIHPKSVNVEEAEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGG
DISIQKDKDQDTIAVDEWIVFQSPARIAQLVKDLKKELDDLLQEKIENPQPVDWNNTKSR
DTAVLTAIIDLITTQENETARNFAPRFQNEEYN
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgagcaccgccgggcttggggccgtagggacgggtcccgcgcttcgcagtca
tcgtcctcctcctcctcttcttccagcggtggcggaggaagaggctgtgggggcggcgga
gggggccgcagtcgtcctcctcctcacttgaagggccgcgaaattggcctctggtacgca
cggagacaaggcgacagaagcaaagaggccgagaggcagcagagagctgtggtacatatg
gatgaacacagagaagaacagattgtacagctgctgaatactgtccagaacaaaaatgaa
aaagagcaagaagctatgtcttggtggtctgatgaagaagggtatacaaaagaggttcct
actaaaacaaagcctgtggtggaaaatcctgttgtggagaaggctcctgaaaggagaagg
ccagcactggaaaaatcatttctagttcaggattcagaatatctcttacaagaaaatatg
cctgatagtgatttagatgaacaattcaaagaagaactgagaaagaaaaagtctgattca
agatatattgagatgcagagatttcgtgagaaattgccttcctacagtatgaggaaggaa
cttgtcaatcttataaataatagtcgggtaactgtaataagtggtgagactggttgtgga
aagacaacccaggtaacccagttcattttggatgactatattgaaagaggaaaaggatct
tcttgcaggattgtgtgcactcagcctaggagaatcagtgctatttctgtagcagaaaga
gttgcagtagaaagggctgaaagctgtggtaatagaaaaagcattggatatcagattcgg
cttgaaagccggttgccaaggagacaaggttcaattttatactgcacaacaggaattgtc
ctgcagtggctccaatcagacaaacaattgtccagtataagtcatgtaatccttgatgaa
gtccatgagagaaatcttcaatcagatgttttaatggcaataattaaagacctcctgaat
gtacgactagatttgaaagtaattctgatgagtgctacactgaatgctgagaagttttca
gattattttgatggttgtcctatgattcatattcctggcttggcttatcctgtcaaggaa
taccttttggaagatgtaattgagaaattacgatacatgccagaaaatacagatcgcagg
ccgcattggaaaaagagatttatgcagggacatatatgcagaccagaaaaggaagaaaaa
gaagaaatttatcatgaacaatggcctgattatgtaaagcaactaagaacacgatattca
gaaactacaattgatgcactggaaatgatggatgatgataaaattgatcttgatttgata
gcagcattaatcagatatattgctcttgaagaagaggaaggcgcaattctagtatttctt
cctggatgggataacattagcactctgcatgatcttctggtatctcaagttatgtttaaa
tcagatagatttgtcatcatacctttgcactcattgatgcctactgttaaccagactcag
gtgttcaaaaagacccctcctggtgttcgtaaaattgtaattgctacaaacattgctgag
actagtatcaccatagatgatgtagtttatgttatagacggaggaaagataaaagaaact
cattttgacacacagaacaatatcagcacgatggctgcagaatgggttagcaaagcaaat
gccaagcaaagaaaagggagagcaggcagagtccaacctggccactgctatcacttgtat
aatggtcttcgtgccagtctgctagatgattatcagttgcctgaaattctgaggacacct
ttggaggaattgtgtttgcaaatcaagattttgaaacttggaggtattgcaaactttttg
atgaatctcatggatccaccttcacatgatgctgtcttgctatccataaagcatctaaag
gagttgaatgcattggacagacaagaacagttgactccccttggtgtccacttggcaaga
ttacctgtggagccacacattggaaaaatgattctgtttggagctttattttgttgctta
gatcctgttctcactattgcagctggcctcagcttcaaggacccttttatcattcccttg
ggtaaagaaaaattagcagatgcaagaagaaaggaactctcaaggaattctaaaagtgat
cacctcactgttgtgaatgctttcaagggttgggaagaagctcagcggcggggcttcagg
tacgagaaggattattgctgggagtattttctttcttcaaataccctgcagatgctgcgt
aacatgaaagggcagtttgcagaacatctccttgcagctgggtttgtgaatagtaggaac
cccagggatcccaaatccaacattaactcagaaaatgagaagttactcaaagctgttatc
tgtgctgggctatatccaaaggtggcaaaaatccgagcaaatttcagcaaaaagagaaaa
atggttaaagtttccaccaaaacagatggaacagtgaacattcatcccaaatctgtgaat
gttgaagaagcggaattccattacaactggctggtttaccatttgaaaatgaggacaagt
agcatatatctgtatgattgtacagaggtttcgccatattgtctattgttttttggagga
gatatttcaattcagaaggacaaagatcaggatacaattgctgtagatgaatggattgtc
tttcagtctccagcaagaatagcacagctggtaaaggatttgaaaaaagaattggatgac
cttctgcaagagaaaatagaaaatccacaacctgtggactggaataatactaaatcaagg
gacactgcagtgttgacagctattatagacttaatcactacacaagagaatgaaactgcc
agaaactttgcgcctcgtttccaaaatgaagaatacaattaa
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