Crotalus tigris (Tiger rattlesnake): 120302669
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Entry
120302669 CDS
T08476
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120302669 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120302669 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctig04812
]
120302669 (VIM)
04147 Exosome [BR:
ctig04147
]
120302669 (VIM)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120302669 (VIM)
Cytoskeleton proteins [BR:
ctig04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
120302669 (VIM)
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120302669 (VIM)
Exosomal proteins of other cancer cells
120302669 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF4407
TolA_bind_tri
DUF5082
HMMR_N
DUF4515
TPR_MLP1_2
Sec10_N
Golgin_A5
HOOK
Fib_alpha
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
120302669
NCBI-ProteinID:
XP_039187395
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSTRTSSSSSSYRRMFGGSSRPSSTRSVTSTTRYSLGSSIRPSSVRMVSSPGGLYASKAV
RVRSSLPPIRFGGDAMVDFSLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLEQQ
NKILVAELEQLKGKGTSRLGDIYEEEMRELRRQVDQLTNEKARVEVERDNLAEDIMRLRE
KLQDEILQREDAENTLQSFRQDVDNASLARLDLERKVETLQEEIVFLKKLHEEEIRELQA
QIQDQHIQIDMDVAKPDLTAALRDVRQQYESVATKNLQEAEEWYKSKFADLSEAANRNND
ALRQAKQEASEYRRQIQSLTCEVDALKGTNESLERQMREMEDAYGAEVASYQDNIARLQE
EIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRINVPIPTFASLNLRETN
LESIPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccggacctcctcctcttcttcctcctatcgccgcatgttcggcggcagcagc
cggcccagcagcacccgctctgtcacttctactacacgctactcgctgggtagctccatc
cgaccgagctccgtccgcatggtctcctctcccggcggcctctatgcctccaaagccgtg
agggttagaagcagccttccgccgatacgcttcggtggcgatgccatggtcgacttctcc
ctggccgacgccattaacaccgagttcaaggctaaccgcacgaacgagaaggtcgagctg
caggagctcaatgaccgcttcgccaactatatcgacaaggtgcgcttcctcgagcagcag
aacaagatcctggtggccgagctggagcagctcaagggcaaaggcacctcccgcctgggc
gacatctacgaggaggagatgcgcgagctgcgccggcaggtggaccagctcaccaacgag
aaggcgcgcgtggaagtggagcgcgacaacctagccgaggacatcatgcgtctgcgcgaa
aaactgcaggatgagatacttcagagagaagatgctgagaacaccctacagtctttcagg
caggatgttgacaatgcctccttggcccgtctggatctggaacgcaaagttgaaaccctg
caagaagaaatagttttcttgaagaaacttcatgaggaggaaatccgtgagctgcaagcc
caaatccaggatcagcacattcagattgacatggatgttgctaagccggatctcacggct
gccctccgtgatgtacgtcagcagtacgaatctgttgctacaaagaaccttcaggaagct
gaggagtggtacaagtccaaatttgcagatttgtctgaagcagccaacaggaacaatgat
gccctgcgccaggctaaacaagaagccagtgaataccgcaggcagattcagtctctcacc
tgtgaggtggatgctcttaaaggaaccaatgagtctttggaacgccagatgcgtgagatg
gaagatgcctatggagctgaagttgccagctaccaagacaacattgccagacttcaggag
gaaatccagaacatgaaagaagaaatggctcgccacctccgcgagtaccaagagctgctc
aatgtaaagatggctcttgatattgaaattgctacttacaggaaactgctggagggagag
gagagcagaattaatgtgccaatcccaacttttgcttccctgaatctgagagaaactaat
cttgagtctattccgattgatacccactccaagagaacactgctaatcaagactgttgaa
actagagatggccaagtaatcaatgaaacttctcatcatgatgagctggaatga
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