KEGG   Crotalus tigris (Tiger rattlesnake): 120302669
Entry
120302669         CDS       T08476                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120302669 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120302669 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ctig04812]
    120302669 (VIM)
   04147 Exosome [BR:ctig04147]
    120302669 (VIM)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     120302669 (VIM)
Cytoskeleton proteins [BR:ctig04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     120302669 (VIM)
Exosome [BR:ctig04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120302669 (VIM)
  Exosomal proteins of other cancer cells
   120302669 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 DUF4407 TolA_bind_tri DUF5082 HMMR_N DUF4515 TPR_MLP1_2 Sec10_N Golgin_A5 HOOK Fib_alpha CENP-F_leu_zip
Other DBs
NCBI-GeneID: 120302669
NCBI-ProteinID: XP_039187395
LinkDB
Position
Unknown
AA seq 457 aa
MSTRTSSSSSSYRRMFGGSSRPSSTRSVTSTTRYSLGSSIRPSSVRMVSSPGGLYASKAV
RVRSSLPPIRFGGDAMVDFSLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLEQQ
NKILVAELEQLKGKGTSRLGDIYEEEMRELRRQVDQLTNEKARVEVERDNLAEDIMRLRE
KLQDEILQREDAENTLQSFRQDVDNASLARLDLERKVETLQEEIVFLKKLHEEEIRELQA
QIQDQHIQIDMDVAKPDLTAALRDVRQQYESVATKNLQEAEEWYKSKFADLSEAANRNND
ALRQAKQEASEYRRQIQSLTCEVDALKGTNESLERQMREMEDAYGAEVASYQDNIARLQE
EIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRINVPIPTFASLNLRETN
LESIPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgagtacccggacctcctcctcttcttcctcctatcgccgcatgttcggcggcagcagc
cggcccagcagcacccgctctgtcacttctactacacgctactcgctgggtagctccatc
cgaccgagctccgtccgcatggtctcctctcccggcggcctctatgcctccaaagccgtg
agggttagaagcagccttccgccgatacgcttcggtggcgatgccatggtcgacttctcc
ctggccgacgccattaacaccgagttcaaggctaaccgcacgaacgagaaggtcgagctg
caggagctcaatgaccgcttcgccaactatatcgacaaggtgcgcttcctcgagcagcag
aacaagatcctggtggccgagctggagcagctcaagggcaaaggcacctcccgcctgggc
gacatctacgaggaggagatgcgcgagctgcgccggcaggtggaccagctcaccaacgag
aaggcgcgcgtggaagtggagcgcgacaacctagccgaggacatcatgcgtctgcgcgaa
aaactgcaggatgagatacttcagagagaagatgctgagaacaccctacagtctttcagg
caggatgttgacaatgcctccttggcccgtctggatctggaacgcaaagttgaaaccctg
caagaagaaatagttttcttgaagaaacttcatgaggaggaaatccgtgagctgcaagcc
caaatccaggatcagcacattcagattgacatggatgttgctaagccggatctcacggct
gccctccgtgatgtacgtcagcagtacgaatctgttgctacaaagaaccttcaggaagct
gaggagtggtacaagtccaaatttgcagatttgtctgaagcagccaacaggaacaatgat
gccctgcgccaggctaaacaagaagccagtgaataccgcaggcagattcagtctctcacc
tgtgaggtggatgctcttaaaggaaccaatgagtctttggaacgccagatgcgtgagatg
gaagatgcctatggagctgaagttgccagctaccaagacaacattgccagacttcaggag
gaaatccagaacatgaaagaagaaatggctcgccacctccgcgagtaccaagagctgctc
aatgtaaagatggctcttgatattgaaattgctacttacaggaaactgctggagggagag
gagagcagaattaatgtgccaatcccaacttttgcttccctgaatctgagagaaactaat
cttgagtctattccgattgatacccactccaagagaacactgctaatcaagactgttgaa
actagagatggccaagtaatcaatgaaacttctcatcatgatgagctggaatga

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