Crotalus tigris (Tiger rattlesnake): 120302815
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Entry
120302815 CDS
T08476
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120302815 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120302815 (XPC)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120302815 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
120302815
NCBI-ProteinID:
XP_039187717
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MVGKRKGVSKVQRSCKKVKEEGPPGGAASSSSPGLKTCEQRDDDFEDEKPEKKTRPKLPS
RKTRDKEHVPQPLRKNSNEKRPKSKVKEEMNRGIESQGFLPKAGKCSGLQSIPLKKKTDA
KKELIITKREEDEDEESEEEWEDVEELCEPEIEMLKELKAPKLPNPTVEIEIETPEQAKK
RERREKRQAEFETYLRRMVKRFSKEVRENTHKVHLLCLLANGFHRNRICLQPDLQAIGLS
IIPIRFTKDSVDRINRLFLSNLVNWFSATFTINDQLSDSEDWRVTLERRFAVYAARDEAE
LVQIFLLILRALHLFCRLVLSLQPIPLKEPSGKGKSSKKSSVLVTSETLPDSAKSSRKCT
RVDTAKKPSLSRAKKLRKKSSSQEDIQKDIKSENDKKSLRAEEGLGRPKNDRRRQVASKV
SYKEESGDSENNDSEFCPPEENDDGSISDEDFEIPRKKMKSSLGTPKTTLRTLKTKAIVN
RQRSVSKQQKDSEIIGNSVDKTVSPCSSVPPKKKNKIISSDEEEEQRSVVLKGTDQWVEV
FLEREDRWVCVDCMHGNVGHPLECFKYASKPVYYIIGIDDNGSVKDITQRYDPAWMTATR
KCRVDAQWWEDTLEPYKSSSVERDTKEEREFLAKLQNQPLPKSVSEYKNHPLYALKRHLL
KYEAIYPETASIIGYCRGEAVYSRDCIHTLHSKDTWLKQARVVRIGEVPYKMVIGYSNQA
RKARMTEPANRDKKDLPLFGLWQTEKYQPPLAVDGRVPRNEFGNVYLFQPSMLPIGCVLL
KLPNLHRVARKLDIDCVPAVTGFDFHGGYSHPVTEGYVICEEYKEVLVAAWENEESEREK
KEKEKREKRVLGNWKLLVKGLLIKERLKKRYSTKNETRVMVEGESGFSTDEEEGPNSETP
AEDMAVSWPQNRQVEEQSEKGKTTRKSKREKKGEAKHLFPFEKL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggaaacgtaaaggggtctcgaaggtgcagcggtcctgcaagaaagtcaaggaa
gagggtccacctggcggcgccgcttcctcctcttccccgggtctgaaaacttgtgagcag
cgagacgatgattttgaagatgaaaaacctgagaagaaaactaggcccaaattgccatct
agaaaaacgagagataaagaacacgtccctcagccacttcgtaaaaattccaatgaaaaa
agaccaaaatccaaagtcaaggaggaaatgaatagaggtatagaaagccaaggcttcctt
ccaaaagcggggaaatgcagcggtttgcagagcattcctttaaagaaaaaaacagatgca
aaaaaagaattaattattacaaagagagaagaagatgaggatgaggaaagtgaggaagaa
tgggaagatgtggaagaactttgtgaacctgagatcgagatgctgaaagaacttaaggca
ccaaagctgcccaacccaactgttgagatagaaattgaaacacctgaacaagcaaagaag
agagagagaagagagaaacggcaagctgagtttgagacatatctccgtcgaatggtgaaa
cgcttcagcaaagaagtccgcgaaaatacccataaggttcacttactgtgcctgttggcc
aacggtttccacaggaacaggatctgccttcagccagatcttcaagcgattgggctttct
atcattcccattcgcttcaccaaagactctgtagatcgcatcaaccgtctatttctgtca
aatctggtgaattggttttctgcaacttttactattaacgatcagctctccgatagtgaa
gattggcgggttactctagagaggcgctttgctgtctatgctgcacgagatgaggcggaa
ctggtgcagatatttttacttattcttcgagcacttcatctattctgccgacttgtattg
tctttacaacccattcctctgaaagagccatcagggaagggaaaatcctccaagaaaagc
tctgttttggtaacttctgagacgttgcccgattctgccaaaagctcaagaaaatgcaca
agagtagatactgctaagaagccaagcctctctagggccaaaaagctaagaaagaaatct
tcatcacaggaagatattcagaaagatataaaatctgagaatgataagaagagtttgagg
gcagaagaagggctgggcaggcctaaaaatgaccgacgacggcaagtggcatcaaaagtg
tcatataaagaagagagtggagacagtgagaataatgattctgaattctgtcctcctgag
gaaaatgatgatggtagcatatctgatgaggactttgaaattcccagaaaaaaaatgaag
tcatcactaggaacccccaaaacaacgctaagaaccctgaaaacaaaagcaattgttaac
aggcaacgatctgtgtcgaaacaacagaaggactcagagataattggtaattcggtagac
aaaacagtcagtccatgttcttcagtcccacccaagaagaaaaacaaaataatttctagt
gatgaagaagaagagcagaggtcagttgtattgaaagggacagaccagtgggtagaggtt
tttcttgagcgagaagatcgatgggtatgtgtggactgtatgcatggcaatgttggacat
cctctggaatgtttcaagtatgcctcaaagccagtgtactacatcattggcattgacgat
aatggatctgtaaaggatataacacagagatacgacccagcatggatgactgcaacaagg
aagtgtcgtgtggatgcccagtggtgggaagataccttagagccgtacaaaagttcttct
gtggaacgggatacaaaagaagaaagagagtttttagctaaacttcaaaatcagcctttg
ccaaaatctgtcagtgaatacaagaatcacccactttatgctttgaagaggcatcttctg
aagtatgaggccatatatcccgagacagcttcaattataggatattgccgaggggaagct
gtctactccagagactgtatccatacgctgcactccaaggacacttggttgaaacaagct
cgagtggtgaggattggggaagtgccttataagatggtgataggttattccaaccaagca
agaaaagcacgaatgacagaacctgcaaatcgggacaaaaaggatttgcccttgtttggt
ctctggcagactgagaaatatcagccacctctggctgtggatggaagggttcctcggaat
gagtttgggaatgtctatctcttccaacctagcatgttaccaataggctgtgtgctgcta
aagcttcctaaccttcatagagtggcccgtaaactggatattgactgtgttccagctgtt
acaggatttgattttcatggtggttactctcatcccgtcacagaaggctatgtaatctgt
gaagagtacaaagaagtgcttgttgcagcctgggagaatgaagagtcagaaagggagaag
aaggaaaaagagaagcgggagaagagagtgctgggaaattggaaactgctggtgaaggga
cttctgatcaaagagagattaaagaagcgctattctaccaagaatgagacaagagtcatg
gtggaaggggagtctggtttctcaaccgatgaggaagaaggaccaaattcagaaacacct
gctgaagatatggctgtttcttggccccaaaatcggcaagttgaggaacagagtgagaaa
ggaaaaacaaccagaaagagcaagagagaaaagaaaggagaagcaaaacatttgttccca
tttgagaaattgtga
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