Crotalus tigris (Tiger rattlesnake): 120303027
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Entry
120303027 CDS
T08476
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120303027
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120303027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
DUF745
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
120303027
NCBI-ProteinID:
XP_039188064
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MAPFRPAASGIRAWGFLLAVLGGVLCQEPEHPHGCSHGSCYPATGDLLVGRADRLSVTST
CGLRHPQPYCIVSHLQDEKKCFVCDSRRPYDPVSNRNSHRIENVITAFARYRKKTWWQSE
NGVEEVSIRLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWQVYRYFAYDCAASFP
TASLGPLRRVDDVICESRYSDIEPSTEGEVIYRVLDPAIPIHDPYSPKIQNLLKVTNLRM
NLTRLHTLGDNLLDSRREIKEKYYFAVYEMVLRGNCFCYGHASECAPLTGNPTAVESMVH
GRCVCKHNTKGLNCELCKDFYHDLPWRPAEGRRTNACKKCNCNEHSHRCHFDMAVYLATG
NVHGGVCDDCQHNTMGHHCQFCKPFYYKDPTKDIRDPGMCRACDCDPDGTLDGGVCDTHD
DPMLGLIAGQCRCKEHVEGPRCDRCKSGFFGLSAENPQGCQRCQCDPRGTVQEGPRCDAI
TGDCFCKRLVSGRSCNQCLPEHWALSLDLRGCRPCDCDVGGAYDNQCATETGQCRCRSHI
VGRQCNQVQTGYYRIVLDHYTYEAEEARLHQGAEVIQRVHLSGRPVTWTGLGFARVLEGS
VVQFHVNNVPFSMEYDLLLRYEPQFPGKWEKVKVSVVRPGPVPSSSPCGNIIPADDLMST
ALLPTSRYIVLQQPVCLEQGIRYTIRVEFTHSGGREHLQGAAVLLDSLVLVPRYSSLEMF
IAGDAASIARKETFERYRCAQQARPVIKGPAPEACANLLTSMSAIIHQGALPCQCDLQGS
LSLECNPDGGQCQCKPHVMGRRCERCTPGTFGFGPGGCKPCQCHSQGSLSSFCDNFSGQC
PCRAGVFGPHCDHCQAGHWGFPNCRPCQCNGRSEECESRTGSCLHCRGHTEGNRCESCVA
GYYGNPVLSLGGQCRPCPCPEAPGSGRHFAATCHQDNPSGTVLCSCLGGYTGPRCDECAP
GYYGNPWQVRGRCQPCACNNNIDLADPKSCDRRTGQCLRCLYHTEGDQCQHCQRGYYGDA
TRHTCRRCSCNHLGTVQNKCSSQEECQCDRHSGQCQCLPNVQGQNCDRCAPNFWNLTSGQ
GCQPCDCHSYYSLSPACNQFTGQCQCRPGFGGRTCSECQENHWGQPGQQCRACDCDPRGI
EKPQCHRTTGHCSCRPGVSGVRCDQCSRGFAGDFPACQPCHQCFGDWDRIVQDLAAHTRS
LMQRAQQLHQTGLAGAFEGPFRRLQDKLSAIQAVVSARNATAATITHLLRNMDDVRQEIA
DVTETLTQLEGLLTATQDKNFNANHALGTLERGVRSLNFSLEDLKHQLNILINTNVLGVY
DSVYQSFVQSRKAEHQANASTLAVHSPVSQSAASRRRTEHLMTSRREAFNRQNAANRRGL
GDLSTRTRGLSLDQINEKVCGAQGDTPCAINSCGGAGCYDEDGRRHCGGLHCDGAVATAD
NALDRARHVEEELHHAVSEVESLLHQVSNAKARAAEAKQRAQAALDHANATKARLEHSNK
ALRDLIQQVKEFLNLEGADPDSIALVASRVLELSIPASPVQIHHLAEEIKERVSSLANVD
AILDQTAGDVRIAGQLLQDARRANARAESVKNAAEAVKRALDDAKRAQSAAEKAINSADS
DIQHTNTVVNEINRKTANAEVELAAAKKRVGHLDRQVDVLKMKRANNILTATRAEETASA
AKNRAEEAEQVLQGPLGDQYRTMQELVDRKAQHVVGARKKAEHLRDEAKGLLRDAHEKLR
RLSKLEETYEENERLLQVKAAQLDGLEAKMRSILKDINEQIQIYNTCQ
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggctcccttcaggccggcggcttcgggcatcagagcgtggggtttcctcctggcagtg
ctgggaggagtgctgtgccaggaacctgaacatccccatggctgttcccatggcagctgc
tacccagccactggagatctgctggtaggcagggctgatcgactttctgtcacttctacc
tgcggcctgcgacacccacagccttactgcattgtcagtcatttgcaggatgagaaaaag
tgttttgtgtgcgactcacgtcgaccttatgatcctgtgtccaaccgtaacagtcatcgc
attgagaatgtcatcactgcctttgcccgttatcggaagaagacctggtggcagtcagaa
aatggagtggaggaagtcagtatccgcctggacttggaggctgaattccacttcacgcac
ttaatcatgacttttaagaccttccgacctgcagctatgctggtggagcgctcagcagac
tttgggcgcacctggcaggtgtaccgctactttgcctatgactgtgccgcatctttcccc
actgcctccctgggacccttgagacgcgtggatgacgttatctgtgagtcgcggtactcg
gacattgaaccttctacagaaggggaggtcatctacagagtgctggatccagctattcca
atccacgatccctacagtccaaaaattcagaatctcctgaaagtcaccaatctgaggatg
aacctgactagactgcacacgctgggagacaacctcttggattcccgccgggaaatcaag
gagaaatactactttgcagtgtatgagatggtgctgcggggcaactgcttctgctatggg
catgcctcggagtgtgccccgctcactggcaaccctactgctgtggaaagcatggttcac
ggtcgctgcgtctgcaagcacaacaccaaagggctgaactgtgagctgtgcaaggacttt
taccatgacttgccctggcgcccagctgagggacgccgcacaaatgcctgcaagaaatgc
aactgcaacgaacactcccaccggtgccacttcgacatggctgtgtacctggccacgggc
aacgtccatggtggggtctgtgatgattgccagcataacaccatgggccaccactgccag
ttctgcaagccattctattacaaggatcccaccaaggatattcgtgatcctggcatgtgc
cgagcctgtgactgtgaccctgatgggacattagatggcggggtgtgtgacacacatgat
gatccaatgctggggctgattgccgggcagtgtcggtgcaaggagcatgtagaggggccc
cgttgtgacagatgcaagtctgggttcttcggactgagtgcagaaaacccacaaggatgc
cagcgctgccagtgtgacccccgaggcacagtccaagagggccctcgatgtgatgccatc
acaggggattgcttctgcaaacgcttggtttctgggcgcagctgtaatcagtgcctgcct
gaacactgggctttgagtctcgatctgcgtggctgccgtccttgtgattgcgatgtaggg
ggtgcctacgacaaccaatgtgctacagaaacaggacaatgtcgctgccgtagccatata
gtgggccgacagtgtaatcaagttcaaactggctattatcgcatagtgttggatcactat
acatacgaggcagaagaagcccgcctccaccagggagcggaagtcatacagcgagtgcac
ctgtctggccgtccagtcacgtggactgggctggggtttgctcgggtgctggagggcagc
gtggtgcagttccatgtcaacaatgtgccattttccatggaatatgacctcctcctgcgc
tacgaacctcagtttccaggaaaatgggaaaaagtgaaggtgtctgtagtgagacctggg
cctgtccctagcagtagtccatgtggaaacatcatccctgccgatgacttgatgtctaca
gctctgctacccacatccaggtacattgtgctgcaacagccagtctgcctagaacaagga
atcaggtacaccattagggtagagtttacccattccggagggcgtgagcatttgcaaggc
gctgctgtactcctggactctttggtactggtgccacgttactcctccttggagatgttc
attgccggggatgccgcctctattgctcgcaaagagacctttgagcgctaccgctgtgcc
cagcaggctcgccctgtgattaaggggcccgccccggaggcttgtgccaacttgctcacc
agcatgtcagccatcattcaccagggggcactcccctgccagtgtgatctccagggatct
ctgagtctcgagtgcaatccagacggtggacagtgtcagtgcaagcctcacgtcatgggt
cgtcgctgtgaacgctgcactcccggcacctttggttttgggcctggtggctgcaagcca
tgccagtgccacagccaagggtccttgagcagtttttgtgacaactttagtggacagtgt
ccttgtcgggcaggtgtttttgggcctcactgtgaccactgccaggctggtcactggggc
ttcccaaactgccgtccatgccagtgtaatggccgatcagaagaatgtgagtcacggaca
ggcagctgtttgcattgccggggccacacggaaggaaatcggtgtgagagctgcgtggcc
ggatactatgggaacccagtactgtccttgggtggccaatgccgtccttgcccctgccct
gaggctcctggctctgggcgccattttgcagccacttgccaccaagacaacccttccgga
actgtcctgtgcagctgcctcggaggttatacaggcccacgctgtgacgagtgtgctcct
ggttattatggcaacccctggcaggttagaggacgatgccagccctgcgcctgtaataac
aacattgatctggcagaccccaaatcctgcgatcgacgcacaggtcaatgccttcgctgc
ctctaccacaccgagggagaccagtgtcaacactgccaaaggggttactatggcgacgcc
actcgacatacctgccgccgttgctcttgtaaccatctggggacggtgcagaacaaatgc
tcctcacaggaagagtgccagtgtgaccggcacagtgggcagtgccagtgcctacccaat
gtccaaggacaaaactgtgaccgttgtgcccccaacttctggaacttaaccagtgggcag
ggctgccaaccctgtgattgccattcctattactcactgagccctgcttgtaatcagttc
acagggcagtgccaatgccggccaggattcggaggccgcacctgttcagagtgccaggag
aaccattggggccagccaggtcaacagtgcagagcctgtgattgtgacccccgtgggatt
gagaagccgcaatgccaccgtactactgggcactgctcctgccgcccgggggtgtctggc
gtgcgctgtgaccaatgctcccgcggtttcgctggtgatttccccgcctgccagccctgc
caccagtgctttggagactgggatcgcattgtgcaagacctggctgcccacacccgcagc
ctgatgcagcgggctcaacaactccaccaaacggggctggctggagcttttgagggcccc
ttccgtcggctgcaggacaaactgagcgccatccaggctgtggtcagtgctcgcaatgct
accgccgccaccatcactcacctcctgcgcaatatggacgatgtgcggcaggagatagct
gatgtaacagaaacactgacccagctggagggattgctgacagccacccaggacaagaat
tttaatgccaatcatgcgctgggcaccctggagcgtggcgttcggagtctcaactttagc
ctagaagatctgaagcaccagcttaatattctcataaacaccaacgtgttgggggtctat
gacagcgtctaccagtccttcgtgcagtcacgcaaagcagagcatcaggctaacgcctcg
accttggctgtgcacagccccgttagccaatcagctgcttccaggcgtcgcacagaacac
ctaatgacgtcccgaagggaagctttcaatcggcagaatgccgccaaccgccgagggctg
ggggacctctcgacacgcacccgagggctgagcctggatcagattaacgagaaggtctgt
ggggctcagggagacactccctgtgccatcaattcctgtggaggagctggttgctatgac
gaggatggcagacgtcactgtggaggccttcactgcgatggagcagtggccacagctgac
aacgcactggaccgagcccgccatgtcgaggaggagctgcaccatgcagtctctgaagtg
gaaagtctgctgcatcaggtctccaacgcgaaggcccgggcggctgaagcaaagcagagg
gcgcaggcagctttggatcacgccaatgccaccaaagctcggctggagcactcaaataag
gcgctgcgtgaccttatccagcaagtcaaagaattcctgaatctcgagggggcagatccc
gacagcattgcgctggtggcttcccgtgtgctggagctctccatcccagcatcccctgtg
cagatccaccatcttgctgaggagatcaaggagcgggtcagcagcctagccaatgtggat
gcaattctggatcagacagcaggggacgtccgcatcgcagggcagctactacaggacgca
cgccgggccaacgctcgggcagagagtgttaaaaatgcagctgaagcagtgaaaagggct
ctggatgatgccaaacgggcccaaagtgctgccgaaaaagccatcaattctgcagacagt
gacattcaacatactaacacagttgttaatgagattaacaggaagactgcaaatgctgag
gttgagttggctgcagccaagaaacgggtgggccatcttgacaggcaggtggatgttctc
aagatgaagcgggccaacaacatcttgacagccacacgagcagaagagacagcgagtgct
gccaagaaccgagctgaggaagctgaacaggtactgcagggaccgctgggtgatcaatac
cgcaccatgcaggagttggtggatcgaaaagcccagcatgtagtgggggcccgaaagaaa
gcagagcacctgcgagatgaggccaaaggacttctgcgcgatgctcacgaaaaactacgc
cggctgagcaagctggaagaaacctatgaagagaatgagaggctgctacaagtgaaggca
gcccagctggatgggctggaagccaagatgagaagcatcttaaaagacatcaatgagcaa
atccaaatttacaacacttgccaatga
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integrated database retrieval system