Crotalus tigris (Tiger rattlesnake): 120303037
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Entry
120303037 CDS
T08476
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120303037 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120303037 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120303037 (PCDH20)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120303037 (PCDH20)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120303037 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
120303037
NCBI-ProteinID:
XP_039188093
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MRRPGNETRRASPPALESSWRRGERSRQPAMGQPSSPGSSSSSSSSSRAAAGQRSLSNVF
IFLLFLEPFNCFASYSRASELFYSINEGLPAGFLIGNLAQDLQLVGTAEDEEKGGLVRKQ
ETDQWGKSLLSFSFASQGLGSQYINLDNQTGVLCTSTQEIDRETLCLEDNVGSTVVSSSS
SSPLPSSESCLLLLDVLVLPQEYFRLVKVKIAIHDINDNAPWFPVPQIHLSVPENSPINT
RLAIEHPAVDPDMGTNGVQTYQLQDDYGVFTLDVEENESGERTPYLIVMGALDRETTDQY
VTLMIAEDGGVPPLVGSATLTIGISDINDNCPQFSETQINVTIFGNSSTGLHIASVHAVD
IDHGINAEITYSYSQKVSFLSRTLFRLNESTGVIKLFKRINGDTPLLHRLSVLANGPGCI
PAVITVLVSIIKVTMRPPEVTPRFIANEAEGVVYLRELEPVNTPIAFFTIKDPDEKYKVD
CYLEGDGPFQLTPYQPYHNEYLLETTKALDYEAQQLYEISVVAWNTEGFHVNKIIQVQVL
DDNDNAPVFSQVLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPEAPSYFSLDK
VTGILTVSTQLDREEREKYRYTVRAVDSGVPSRESIATVTLSVLDKNDNSPRFINKDFSF
FVPENFPGFGEIGVISVSDADIGQNGWVALSVVNRSDIFVIDTGKGVLRAKVSLDREQQS
SYVLWVEAVDGGDPPLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITE
VYAIDNDTGMNAVIAYSIIGRRGPRPESFKIDPKTGNITLEESLMQNDYGLYRLLVKVSD
HGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKESDLSIEEKEPQISIEPTHRRAEAVSC
MPTLVTLSIISLSSISLVTGMGIYICLRKGRKYHRGDEGLEVQIPLNGRIDLHRLEKKPV
EISNI
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcccagggaatgagacgcggcgcgcctcgcccccggccctggagtccagctgg
cggcgaggcgagcggagccggcagccggctatggggcagccctccagccctgggagcagc
agcagcagcagcagcagcagcagagcagccgccggtcagagaagcctgtcgaacgtattc
attttcctgcttttcttggaaccgtttaactgctttgcaagctacagtcgggccagcgaa
ctcttctacagcatcaacgaaggacttcccgctggattcctcattgggaacctagcccag
gatttacagcttgtggggactgcagaggacgaagagaaaggaggactggtgaggaagcag
gagactgaccaatgggggaaaagtctactctccttcagctttgcttcccaaggactgggg
agccaatacatcaacctggacaatcagacaggggtcctgtgcacctcgacccaggaaatt
gaccgagaaacactctgcttggaggataatgttggctccacggtggtttcatcttcttcc
tcttctccacttccatcctcagagtcgtgcttgctcttgctagatgttctggtgttaccc
caggagtatttccgtctggttaaggtgaagattgccatccatgacatcaatgacaatgca
ccgtggttccctgtgccacagatacacctctctgtgcctgaaaattcgcccatcaatacc
cgtttagctatagagcatccagctgtggacccagacatgggaaccaatggggtgcagacg
taccaactacaagatgattatggggtttttactttggacgtggaggagaatgaaagtgga
gaaagaacaccttatcttattgtcatgggtgccctggatagggagactaccgaccaatat
gtcactcttatgattgcagaggatggtggggttccaccactggtgggtagtgccaccctc
accattgggatcagtgacattaatgacaactgtccccagttcagtgagacacagatcaac
gtcaccatctttggcaactctagtactgggttgcacatagcgtcggtccatgctgtggat
attgatcacggaatcaatgccgaaataacctattcctacagccaaaaggtttcctttctg
tcccgcacgctcttccgtctcaacgaaagcacgggggtgattaagttgttcaagaggatc
aacggggacacacctcttctgcatcggctgagcgtgttagccaatggtcctggttgcatc
ccagcggtgataactgtgttggtgtccatcatcaaagttaccatgagaccacctgaagtg
actccccgttttatagctaatgaagcagagggggtggtttacttgagagagttggaaccc
gtcaacacccccattgcttttttcaccatcaaagaccccgatgaaaaatataaagttgat
tgctatttggaaggggatggccctttccaactgacaccttatcaaccctatcacaatgag
tatcttttggagactacaaaggccttggattatgaggctcagcagttgtatgagatttct
gtagttgcgtggaatacagagggatttcatgtgaataaaatcatccaagtgcaggttctg
gatgacaatgacaatgctccagttttctcccaagtcttgatagagttatccatagaggaa
aataatgtccccaatgcatttctgaccaaactgcacgccaccgatgctgacagtggagaa
agaggtcaagtatcctacttccttgggcctgaggcaccttcctatttttccttagacaaa
gttactgggatccttactgtttctacccagctggatagagaagaacgagaaaaatatcgc
tacactgtcagagctgtggattccggcgtgccctcgcgagaatccatcgccactgtgacc
ctctctgtgttggataaaaatgacaacagcccgaggtttatcaacaaggatttcagtttc
tttgtaccagagaatttcccaggctttggtgaaattggagttataagtgtcagcgatgca
gatattgggcaaaatggatgggtggccctctctgtggtcaaccgaagtgatatctttgtg
atcgacactggcaaaggtgtgttgagagctaaggtctcccttgacagggaacagcaaagc
tcctatgtcttgtgggttgaagcagtggatgggggtgacccacccttgtcctcaactgca
aaaatcaccatccttttactagacatcaatgataatcccccattggttttgttcccccag
tctaacatgtcctaccttctggtccttccttctacattgcctgggtctcccatcacagag
gtctatgctatagataatgacaccggcatgaatgcggttattgcgtacagcatcatcggg
agaagaggccctcggccggagtccttcaagattgaccccaaaacaggcaacatcactctg
gaagagtcactcatgcaaaacgactacggcctgtatcgccttctggtgaaggtgagtgac
catggatatccagaacctctgcattccaccgtcatggtgaacctcttcgtcaatgacact
gtgagcaatgagagctacattgaaagtcttctgagaaaagaatcagacctcagtattgag
gagaaagaaccccaaatttccatagagcctacgcacaggagagcagaggccgtaagctgc
atgcccaccttggtcaccctctccataataagcttgagttccatcagcctggttacaggt
atggggatttatatttgcctaaggaaggggagaaaataccaccgaggggatgagggtttg
gaagtacaaatcccattaaacgggagaattgacctgcatcggctggagaagaaaccggtg
gaaatttccaacatctga
DBGET
integrated database retrieval system
