Crotalus tigris (Tiger rattlesnake): 120303228
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Entry
120303228 CDS
T08476
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03030
DNA replication
ctig03410
Base excision repair
ctig03420
Nucleotide excision repair
ctig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120303228 (RFC5)
03410 Base excision repair
120303228 (RFC5)
03420 Nucleotide excision repair
120303228 (RFC5)
03430 Mismatch repair
120303228 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctig03032
]
120303228 (RFC5)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120303228 (RFC5)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120303228 (RFC5)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120303228 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
120303228 (RFC5)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120303228 (RFC5)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120303228 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
120303228 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_24
AAA_11
AAA_22
AAA_assoc_2
AAA_14
RuvB_N
ResIII
DEAD
DUF815
ATPase_2
AAA_19
AAA_5
AAA_30
TniB
PhoH
AAA_7
DNAX_ATPase_lid
bpMoxR
TIP49
nSTAND3
AAA_28
Gp44_lid
Mg_chelatase
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
120303228
NCBI-ProteinID:
XP_039188519
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MERSAEAAAATVAGRSANLPWVEKYRPQTLGDLISHEDILNTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKAKEFGSMVLELNASDDRGIDIVRGPILNFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPQL
MIPRLKHVIEKENVDVSPDGMKALVTLSNGDMRRSLNILQSTYMAFGKVTEETVYTCTGQ
PLKSDIANILDWMLNLDFSSAYRNILELKTLKGLALQDILTEIHLFVHRVDFPTSVRMQL
LIKMADVELNVLLKMDHLLFRCLSDTAWLRGQMRRSNWGLL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttcggcggaggcagcggcggcgacggtggccgggaggagcgcgaacttacct
tgggtagagaagtaccggcctcagaccctcggggatctgatttctcacgaggatattttg
aataccatacagaagtttatcagtgaggaccggttgcctcatctcctactttatggacct
ccagggaccggcaagacctctacgattctcgcctgcgctaaacagctttacaaagcgaaa
gaatttggctcaatggttttagagctgaatgcttctgacgaccgaggcattgatatcgtc
cgagggcctatcctgaactttgccagcaccagaaccattttcaagaaaggttttaagctg
gtgattctggatgaagccgacgccatgacgcaggatgctcagaatgccctcaggcgtgtg
attgagaaattcaccgagaatacccgattttgcttgatctgcaactacctttccaaaata
atcccagctctacaatccagatgcaccaggttccggtttggccctttgacgccacaactc
atgattcctcggttgaagcatgttattgagaaggagaatgttgatgtgagtcctgatgga
atgaaagccttggtgacgctgtccaacggcgatatgcgccgatctctgaacatcttgcag
agcacctacatggcttttgggaaagtgactgaagagacggtttacacctgcacggggcag
cctctcaaatcggatatcgccaacatcctggactggatgctgaatctggatttctcttct
gcctatcgcaatatcttggaactgaagacgctaaaaggcttggctttgcaagacattcta
acagaaattcatttgtttgttcatcgagttgacttcccaacatctgttcggatgcagctg
ctgatcaagatggcagatgtggagctaaacgtcctgcttaagatggatcatctcctgttc
cgttgtctttcagacaccgcctggctgcggggacaaatgagaagatccaactggggtctc
ttgtag
DBGET
integrated database retrieval system
