Crotalus tigris (Tiger rattlesnake): 120303391
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Entry
120303391 CDS
T08476
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120303391 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120303391 (TAF5L)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120303391 (TAF5L)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120303391 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
120303391 (TAF5L)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120303391 (TAF5L)
STAGA complex
120303391 (TAF5L)
TFTC complex
120303391 (TAF5L)
SAGA complex
120303391 (TAF5L)
SLIK complex
120303391 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Ge1_WD40
WD_LRWD1
Beta-prop_IP5PC_F
eIF2A
Mala_s_1-like
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
120303391
NCBI-ProteinID:
XP_039188809
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYVKRRQYVDSEGPLKQGLRLCHTAEEMAANLTVQSESGCTNVISA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSQEVMPLLYPLFVYLHLNMVQNGLKSTMDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVIRLQEDSYNFLLRYLQ
SDNNSALCKVLSLHIHLDVQPAKRVDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRPK
KLKSEPHLVDISRIHLACDILDEEAEDDDDVGTEMKLLRGHSGPVYSTSFLSDSSGLLSC
SEDTTIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPVDGSSSELVGVYTGQINNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcaccgaacagattcagatggctgtttcctgctatgtcaagcgcagg
cagtacgtagactcagaaggtcctctgaaacaagggttgcgcttatgccacacagccgaa
gaaatggcagctaatctaacagtacaatctgaatcgggttgtacaaatgtgatttctgct
gcgccctgcttagcagagccccaacaatatgaagtacagtttgggcggttgcggaacttt
ctaacagattcagattcccagcatagccaggaagtgatgcctctcctgtaccctctcttt
gtctacctccatctcaacatggtccaaaatggcctaaagagcacaatggacagtttctac
agtcgcttccatgggatgttcttacagaatgccagccagaaagacatcattgaacagtta
caaactacattaacaattcaagacatcctgtccaacttcaagcttcgggcatttctggac
aataagtatgtgatccgccttcaggaagacagctacaacttcctcctccgctacctccag
agcgataataacagtgctctctgcaaagtcctatccttgcacattcacctagatgtgcag
cctgccaagagagtggactaccagctctatgctagtggtggctcttcacgcagtgagagc
aatggcctagaacccactgacatgcctgcttccatcctgcagaatgaggcagccttggac
ctcttgcaagatagcattaaaagagtcaaagatgggccaccatcccttactaccatatgt
ttctatgcattctataatactgaacagttgctgaacacagcagagatctcgccaaatagc
aagctgctggctgctggttttgacaattcctgtgtaaagctgtggagcttgcggcccaag
aagctgaaatctgagcctcatttagtagatatttcccgaatccacttggcctgtgatatc
ttggatgaagaggctgaagatgatgatgatgtaggaactgaaatgaagttattaagaggg
cactctggaccagtgtatagcacaagttttttgtcagacagttcaggattgctgtcatgc
tctgaagatacaactatcagatactgggatcttggatgttttacaaacactgtcttgtac
caaggacatgcttatccggtgtgggacctggacatcagcccttgcagtttgtactttgct
agtgcttctcatgaccgtacagcaagactctggtcatttgatcggacgtatcccctacgg
atatacgcgggccatttagcagatgtcgactgcatcaaatttcatccaaattctaactac
ttggcaacaggatctacagacaaaacagtgcgcctctggagtacccagcaaggaaacaca
gtacgtctgtttacaggtcaccggggtcctgtcctgtcccttgctttttctcccaatggt
aagtacttggcctcggcaggtgaagaccagcgcttaaaactgtgggacttggcatctgga
actctttacaaagaactgcgggggcatacagataatatcaccagccttacttttagtcca
gatagtagtttgattgcttctgcatcaatggacaactctgttcgggtttgggatattcga
aacacttactgcaatgctcctgtagacggctcttccagcgagctagttggagtatatact
ggacagatcaataatgtactgagtgtacagtttatggcctgtaaccttcttttagtgact
ggaattgcacaagagaatcaggaacattag
DBGET
integrated database retrieval system
