Crotalus tigris (Tiger rattlesnake): 120303795
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Entry
120303795 CDS
T08476
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
ctig03015
mRNA surveillance pathway
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120303795 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
120303795 (NCBP1)
03015 mRNA surveillance pathway
120303795 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120303795 (NCBP1)
03041 Spliceosome [BR:
ctig03041
]
120303795 (NCBP1)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
120303795 (NCBP1)
Spliceosome [BR:
ctig03041
]
Common components
Common spliceosomal components
Cap binding complex
120303795 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1003
XkdW
LUC7
Nuf2_DHR10-like
NDUF_B5
WIT1_2_N
Motif
Other DBs
NCBI-GeneID:
120303795
NCBI-ProteinID:
XP_039189543
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MSRRRHRDENDEQPYKKRKVSIAERLESLISKVGEKSPFSLESRIEGLAGVLEADLPNYK
SKILKLLCTVARLLPQKMTIYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKANLYNEAI
YLVRFFSDLVNCHVIAAPSMVAMFENFVNVTQEEDVPQVRCDWYVYAFLSSLPWVGKELY
EKKDTEMEQILSTVENYLKRRQKNHVPMLQVWSADKPHPQEEYLDCLWAQIQKMKKDHWQ
ERHIPRPYLAFDSVLCEALQHNLPPFTPPPHTADSVYPMPRVTFRMFDYTDDPEGPVMPG
SHSVERFVIEENLHCIIRSFWKERKTCASQLTSYPGNNKIPLNYHIVEVIFAELFQLPIP
PHTEIMYTTLFIELCKLQPGSLPQVLAQATEMLYMRLDTMNTICIDRFMNWFSHHLSNFE
FRWSWEDWSDSVSEVLDRPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLTPANPACIY
KYGDESNKSLPGYNVALCVSIAIKNKASNDEIFAILKDVPNLNQDDDDDEGFSFNPLKIE
VFVQALLHLASKSFSHSFSALGKFREVLRTLAESDEGKLHILRVMYEVWKNHSQMIAVLV
DKMIRTQIVDCAAVANWIFSPELSHDFTRFYIWEILHSTIRKMNKHVMMIQKELEEAKEK
LAKQQKRRDDSRRNERESWPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVR
CETGGIDVITPWYRNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAIFQQFCA
LQG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcacagggacgagaacgacgaacaaccatacaagaaaaggaaagta
tctattgcagaacgattggaatctctaataagcaaagtgggagaaaagagtcctttctct
ttggaaagtagaatagaaggcttggctggagttttggaggcagatctaccaaactacaaa
agcaaaatactgaaactgctttgcacagtagcacgtctgttaccacagaagatgaccatt
tacacaactcttgttggcttgctgaatgccagaaactacaattttggtggagagtttgta
gaagcgatgatacgtcaactgaaagaatgtttgaaagccaacctatacaatgaagctatc
tatttagtgcgctttttttctgatcttgtgaattgtcacgtaatagctgcaccctcaatg
gtagccatgtttgagaatttcgtcaatgtgacgcaagaggaggatgtacctcaggtgcga
tgtgactggtatgtgtatgcgtttctgtcatccttaccttgggtggggaaggagctgtat
gagaaaaaggatactgaaatggagcagatcttgtctactgttgaaaactatctgaaacgg
cgtcagaagaaccatgtgcccatgctacaagtttggtctgctgataaaccacatccacaa
gaagagtacttagattgcctttgggctcagattcagaaaatgaagaaggaccactggcaa
gagaggcacattccgaggccatacctggcgtttgacagcgtgctttgtgaagcactgcag
cacaacctgcctccttttacgcccccaccccacacggcagattccgtttacccgatgcca
agagtcaccttccgaatgtttgactacactgatgatcctgaaggaccagttatgcctggg
agccactctgttgaaagatttgtgattgaagaaaacctccactgcatcatcagatcattt
tggaaagagagaaagacatgtgcttcccaattaacaagctatccaggaaacaacaagatc
cctctgaattaccacattgttgaggtcatttttgctgagttgtttcagcttcctattccg
cctcacacagaaatcatgtacactacgctgtttattgaactctgtaaacttcagcctgga
tctttacctcaagttcttgcacaagctacagaaatgctgtacatgcgcttagataccatg
aataccatctgcatagatcggtttatgaattggttttcccaccatcttagtaattttgag
ttccgttggagctgggaagattggtcagattctgtttctgaggttcttgacagacccaag
cctaagtttgtaagagaagtactggaaaaatgcatgaggctttcctaccatcagcgaata
atagatatcgttcctgctagtttttcagtccttactccggcaaatccagcatgtatttat
aaatatggagatgaaagtaacaaatctcttcctggatacaacgttgcactctgtgtaagc
attgccattaaaaacaaagcaagtaatgatgaaatcttcgccattctgaaggatgtgccc
aatcttaatcaggatgatgatgatgatgaaggcttctcattcaatcctttaaaaatagaa
gtttttgtccaggcactattgcacttagcgtcaaagtcattcagtcactccttcagtgct
ctgggaaaatttcgagaagtcctcagaactttggctgaaagtgacgaagggaagcttcac
attctcagagtgatgtatgaagtatggaagaatcattctcagatgattgctgtactggtg
gataagatgattcgtacacagattgtggattgcgctgcagtggcaaattggattttttct
ccagagctatctcatgattttacaagattttatatttgggagatcttgcattctaccatt
cgtaagatgaacaagcatgtgatgatgattcaaaaggagctagaagaagccaaagaaaaa
ttagccaagcaacagaaaagacgtgatgattctcgaaggaatgagagagaaagttggccc
cttgaagaacagatcgaacgcttgcaagaaaaagttgaatcagctcaaagtgaacaaaaa
aacctcttccttgtaatattccagcgttttattatgatcctaactgaacatctagtacga
tgtgaaacaggagggattgatgtaattacaccttggtacaggaactgtatagagaggctg
cagcaaattttcttacagcatcatcagatcatccaacagtacatggtgaccttggagaac
cttctatttacagcagaattggatcatcacatactggctatatttcagcagttttgtgca
ctccagggctga
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integrated database retrieval system
