KEGG   Crotalus tigris (Tiger rattlesnake): 120303803
Entry
120303803         CDS       T08476                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctig03041]
    120303803 (SMU1)
Spliceosome [BR:ctig03041]
 Complex B
  Other components
   Complex B specific factors
    120303803 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_IP5PC_F DUF7165 TFIIIC_delta KNTC1_N VPS8_N PROPPIN Beta-prop_NOL10_N LisH LisH_PAC1 zf_topless
Other DBs
NCBI-GeneID: 120303803
NCBI-ProteinID: XP_039189562
LinkDB
Position
Unknown
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALAALQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMIIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKVWNMKTTECCNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatagaaatcgagtcctcggatgtcatccgtttaatcatgcaatatctgaaggag
aacagccttcatcgggccctggctgcattgcaagaagaaacaacagtgtctctgaacacg
gtggacagcattgagagctttgtggcggatattaacagtggccattgggatacagtactg
caagccatacagtccctcaagttgccagacaaaacactcattgatctgtatgagcaggtt
gttctagaactgatagaacttcgtgaattgggtgctgctagatctcttctgagacaaact
gacccaatgatcatgttaaagcaaacccaaccagagcgatatattcatcttgaaaacctt
ttggctaggtcctattttgacccacgtgaggcatacccagatggaagcagcaaagagaag
cggagagctgccattgcccaggccttggctggtgaagttagtgtggtacctccatctcgt
cttatggccttattaggacaggccctgaaatggcagcagcatcaggggctactcccccct
ggtatgattattgacttgttcagaggaaaagcagccgtcaaagatgtggaagaggaaaaa
ttccccacacagctgagtaggcatattaagtttggtcagaagtctcacgtggaatgtgct
cgattttctccggatggtcagtatctggtcactggttctgtggatggatttattgaagtc
tggaactttactactgggaaaatcaggaaggacctgaaataccaggcacaggataatttt
atgatgatggatgatgcagtgctgtgcatgtgtttcagcagagacacggaaatgttagca
actggagcacaagatggaaaaattaaggtgtggaagattcagagtgggcagtgtctgagg
cgatttgaaagagcccacagcaaaggtgtcacctgcctgagtttctcaaaggatagcagc
cagattctgagcgcctcctttgatcagacaatccggattcatggcctgaaatcagggaag
actctcaaggaatttcgcggtcattcctcatttgttaatgaagctacatttacacaagat
ggacattatattattagtgcatcctctgatggcactgtgaaggtttggaatatgaagact
acagaatgctgtaacactttcaaatctctgggtagcacagctggaacagacatcactgtg
aacagtgtgattctcctgcctaaaaatccagagcactttgttgtttgtaacagatcaaat
acagttgtcatcatgaacatgcaggggcaaattgtgagaagtttcagctctggtaagaga
gaaggtggtgattttgtctgctgtgccctttctcctcgaggcgagtggatctactgtgtg
ggtgaagattttgtcctctactgtttcagcacagtgactgggaagctggagagaacactg
acggttcatgaaaaggatgtcattggtattgctcaccatccccaccaaaatttgattggt
acctatagtgaagatgggttgttgaagctgtggaaaccatag

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