Crotalus tigris (Tiger rattlesnake): 120304215
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Entry
120304215 CDS
T08476
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120304215 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120304215 (NFRKB)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120304215 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
120304215
NCBI-ProteinID:
XP_039190461
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MDSLDHMLTDPLELGPTGEGHGTQIMEDCMLGSIRISLPEDLLEDPEIFFEVVSLSTWQD
VLVDSQREHLKKFLPRFPENNHEYQNNLILSLFNGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLSSQQQYFYRLLKQILASRNHLLELARKGGSDLAVKRKYSAAAYA
AEERDRRTHRRYLKILREVKEECGDTTLSSDEEDLSSWIPGSPAHCSSPAVPLRVIPTLS
TQDMKTADKLDFGENSLKMMLKTHHEKRKRQPNHPDLMTGDLTLNDIMTRVNAGRKGSLA
ALFDLAVLKKKVKEKEEKKKKKLKVIKSEAEDFSESLGNSEGIHPVSQNPSPIPPLWDPP
SLPSVKEEPLEDIKPCLGVNEISSSFFSLLLEILLLEGPASLSMLEDKVMDWQSSPASTL
NSWFSFAPNWSELVLPALQYLTGVSRDASSSFSPFVEFKEKTQHWKLIGSSQDHEKELAA
LFQLWLETKDQAFFKDNEDSSDATTPVPRVRTDYIVRPSTGEEKRVFQEQERYRYSQPHK
AFTFCMHGFESVVGPVKGVFDKETSLNKPREHSLLRSDRPAYVTILSLVRDAAARLPNGE
GTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDR
SEEEFERIHQAQAAAAKAKKALQQKPKPPAKTKSSTKESSAKVGTASTSEPSQLSVSDSS
MPPTPVTPATPASLPLPAIPISPPPVSVVSKTLSCVAAEPAKSNQSILLVSSPTMPQLGT
LLSTPQSTQAQPGTQLSTPRTASHTTSSGLPQVRVVTAPSSLPPLSQPAQVVAQQQLSLA
SIPQIRVPSTSVQSKVFSQAVMTVPVKAQTSPVQVQRTTVAVTGAASVTGTGIPATPIPT
PKPATSSSNTTASNPSTTPFSPSSSSSSSSSSSSSLSSSSSSTTVLQNIAGQNIIKQVSI
TGQLGMKSQTGSSLPLTTSNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQ
VTTVKLTQDLFSTAAAAGSSPAGKGICATLRVTSSPIQSSDSPAKISTPTSASASPAGPT
VVKVTPDLKTVESAGSAFRLMPALGMSMADQKGKALTTMASSEAKPAATIRIVQGMGVMP
PKPGQTITVATHAKQMPSAVSIPGTVHTSAVSLPTMTASVSKAVAVVSAAGTPISIGAGT
STVRQVPVTTTVVSASQPGKLPARITVPLSVISQPVKGKNVVTAPLLKGSLGANISGLGR
NIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQAAQVRIQTVPASHLQQGTVSGSTK
AVSTVVVTAAPSPKQTQDQP
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggactccctggatcatatgctcactgatccattggaactggggccaactggggaagga
catggcacccaaattatggaggattgcatgctgggatccatacgcattagccttcctgaa
gatcttttggaagatcctgagatcttttttgaagttgtcagtctttcaacctggcaggat
gtgttggtggattcacagcgagaacatttaaaaaagtttttgccccgcttcccggaaaac
aatcacgaataccagaacaatcttatcctgtccctatttaatggagagaacttcagattt
ggaaacccacttcatattgcccaaaaactcttccgagatggacatttcaatcctgaagtg
gtgaagtacagacagctttgcttcaagtcccagtataagcgctatctcagttcccagcag
cagtatttttatcgattgctgaaacagattcttgcctcccggaatcatctgttagaactc
gctaggaaggggggatcggatctggccgtgaagagaaaatactcagcagctgcttacgct
gctgaagaacgagataggcgaacacatcgtcgataccttaaaatcctcagggaagttaaa
gaagaatgtggggacaccaccctatcctcagatgaagaagatttgagttcctggattcca
ggttctccagcccattgttcaagtcctgctgttcctctcagagtgatacccacattatca
acccaagacatgaaaacagcagataaacttgatttcggtgagaatagcttgaagatgatg
ctgaagacacaccatgaaaagcgcaagcggcagccaaatcaccctgatttgatgacaggg
gacttgactctgaatgacatcatgacacgtgtgaatgctggcaggaaaggatctttggca
gccttgtttgaccttgctgtcctcaaaaagaaggtgaaggaaaaggaggagaaaaagaaa
aagaagctaaaagtgattaaatctgaggctgaagatttctctgaatctcttggcaactca
gaaggaatccatcctgtttctcaaaatccctcccccattcctcccctgtgggatccccca
tccctcccatctgttaaagaagagcctcttgaagacatcaagccatgtcttggagtgaat
gaaatctcttccagcttcttttctctacttctcgagatcctgttgttagagggtcctgct
agtctctcaatgcttgaagataaagtgatggactggcagtcttctcctgccagcacatta
aacagctggttctcctttgcccccaactggtcagaactggttttacctgccttgcaatat
ctcactggagtcagcagagatgcttcttccagcttttctccttttgttgaattcaaggaa
aaaactcaacattggaaactgataggctcttcccaagaccatgagaaggagctagcagct
ctcttccaactttggttggagacgaaagaccaagctttcttcaaggacaacgaagatagt
tcagatgctaccacaccagtcccccgagtaaggacagactatatagtccggcctagcact
ggagaagagaaacgtgttttccaggaacaggagcgttatcgatacagccaacctcacaaa
gcgttcactttctgtatgcatggctttgaatcagtggtgggtcctgtgaaaggagtgttt
gataaggaaacatctctaaacaaaccccgggaacattctttgttgcgatctgatcgacct
gcatatgtcaccatattgtctcttgttcgagatgctgcagcccgtcttccaaatggagag
gggactcgtgctgaaatttgcgagcttctgaaggactcccagtttcttgctcctgatgtc
accagtgctcaggttaacactgtggtgagtggtgctttagatcgattgcactatgagaaa
gacccctgtgtaaaatacgatattggtcgcaaactgtggatatatctccaccgagacagg
agtgaagaggagtttgagcggattcatcaggcccaggcagctgcagcaaaggccaagaaa
gcacttcagcagaagccgaagcctcctgcaaagacaaaatcaagcaccaaggagagttcg
gcgaaagtggggaccgccagcacttcagagcccagccagctgagcgttagtgactccagc
atgccgccaacccctgtaactccagcgacacctgcctcgctccctttgccagccattccc
atttcgccccctcctgtctctgtggttagcaagactttgtcttgtgttgcagcagagcca
gcaaaatccaaccagagcatccttttggtatcttctcctaccatgccccagcttggtacg
ttgctctcgaccccacagagcactcaggcacagccgggaactcagttgtctaccccacgg
acagctagccacactacttcctcaggtcttcctcaagtccgagtagttacagctccgtct
agccttccccctctgtctcagcccgcccaggtggtagcacaacagcagctctctctagca
tccatacctcagatccgggttccttccacttctgtgcaaagcaaagtattctctcaggcc
gtcatgactgttccagtcaaagctcagaccagcccagtccaagtgcagaggacaactgtt
gctgtaactggagcagccagtgtcactgggacaggaattcctgcaacgcctattcccacc
cccaagccagcaactagttcttcaaacactacagcatccaacccttccactactccattc
tctccttcttcttcttcctcctcctcctcctcctcctcctcctctttatcgtcttcctct
tcatccaccactgtcctccagaacattgctggccaaaatatcattaaacaggtgtctatt
actggacagctcggcatgaaaagccagacagggagcagcctcccacttacaacatccaac
ttccgtattcaaggcaaggatgttctgcgtctgcctccatcctccatcaccacagatgcc
aaggggcagacagttctccgcatcacaccggacatgatggccaccttggccaaatctcaa
gtcactactgtcaagctgactcaagacctcttcagcacggctgctgctgctggaagcagc
cctgcagggaagggcatctgcgccactttgcgtgtgacgtcaagccccatccaatcctcg
gactctcccgccaagatcagcacccccacctccgcttcagccagtcccgccggaccaacc
gtggtcaaagtcacacccgacttgaagacagtggagtctgccggttccgccttccgactg
atgcctgctctaggcatgtccatggcagaccagaagggcaaagccttgaccacgatggca
tcctcggaagccaaaccagcggccaccataaggattgtgcagggcatgggggtgatgcct
cccaagcctggccagacgattacagtggccactcatgccaagcagatgccttctgcggtc
agcatacctggaactgtgcacacctcggctgtttctttgcccaccatgacggcttcggtc
tccaaggcggtcgctgtggtgtcagcagcaggaacacccatatctataggagcagggacc
tctactgtgcggcaggtccccgtgaccaccacagtggtatccgcctcccagccagggaaa
ctgcctgcccggatcaccgtgcccctctcggtcatcagccagcccgtgaaaggcaagaac
gtcgtgactgcgcctctcctcaaaggcagccttggggccaacattagcggcttggggcga
aacatcatccttaccacgatgccagctggaacgaaactgattgctgggaacaaaccagtg
agcttcctgactgcccagcagctgcagcagctgcagcaacaaggccaggctgcccaggtg
cggattcaaaccgttccagcttcccatctccagcaaggaaccgtctctggctctacaaaa
gcggtgtccaccgtagttgtcacagcagccccatctccaaaacagacacaggatcagcca
tga
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