Crotalus tigris (Tiger rattlesnake): 120304298
Help
Entry
120304298 CDS
T08476
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018
RNA degradation
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120304298 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
120304298 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120304298 (LSM4)
03041 Spliceosome [BR:
ctig03041
]
120304298 (LSM4)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120304298 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
120304298 (LSM4)
Spliceosome [BR:
ctig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120304298 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120304298
NCBI-ProteinID:
XP_039190626
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGIGGTGRGVFGGRGRGGA
PGSGRGQQEKKPGRQAAKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactgtccttgctgaaaacggcacagaaccacccaatgctggtggaactcaaa
aatggtgaaacttacaatggccacttggttagctgtgataactggatgaacatcaatctt
cgagaagttatttgcacatcaagggatggagacaaattctggaggatgcctgaatgttac
atccgtggcagcaccatcaaatacctgcgcattcctgatgagatcatcgatatggtgaaa
gaagaagtggtctccaaaggccgtggccgtggtgggatgcagcaacagaagcagcagaaa
ggacgtggcatcggtggcactgggcgaggagtatttggaggccgtgggcgaggaggggcg
ccaggaagtggccgaggacagcaagaaaagaagccagggagacaagcagcgaagcagtga
DBGET
integrated database retrieval system
