Crotalus tigris (Tiger rattlesnake): 120304638
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Entry
120304638 CDS
T08476
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120304638 (DDX17)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120304638 (DDX17)
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120304638 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120304638
NCBI-ProteinID:
XP_039191396
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGSPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLT
PYEVEELRRKKEITVRGSDGCPKPVFAFHQCNFPQYVMDVLMDQHFTEPTPIQCQGFPLA
LSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPVCLVLAPTRELAQQVQQVAD
DYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLD
EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQINVGNLELS
ANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPA
MCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR
IGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRS
RYRTSNSSNNPNLMYQEECERRLRGVKDGRRDSSNFRERDRSDSFANGANKAYGGTYGNA
SSAFGAQQGQYGYAQGAYGTAAYGTSGYGAEYSAAGYGGASTATAGRNSQSTNQQQQYAG
MGRSSQQPQPLMSQQFPQPPGTSVIGYMGQTASYQYPPPPPPPPPSRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcttcggtgaccgaggccgcgatcgtgatcgcggagggtttggtagccctctg
cctcctaaaaaatttggaaacccaggagagcgtttgcgtaagaagaaatgggacttgaat
gaattacccaaatttgagaaaaacttttatgttgaacatccggaagtagcaagactcact
ccttatgaagttgaagagttgagaagaaagaaagagattactgtaagagggtcagatggc
tgccccaagcccgtatttgcatttcatcagtgtaactttccacaatatgtgatggatgtc
ttgatggaccaacattttactgaaccaactccaattcagtgtcagggctttcccttagcc
cttagtgggcgtgatatggtgggcattgcacagactggctctgggaaaacattggcatat
ttgctacctgcaattgttcatataaaccaccaaccatatttggaaaggggagatggtcca
gtttgtttagttttagctcctacccgagaactggcgcaacaagtccaacaggtagctgat
gattatggtaaatgttcaagattgaagagtacctgtatatatggaggagcacccaaaggt
ccccaaattagagacttagaaagaggtgttgaaatttgtattgctacacctggtcgtctg
attgatttcctggaagcagggaaaactaatcttcgccgctgtacatatcttgtactggat
gaagctgatagaatgctggatatgggttttgaacctcagattcgtaaaattgttgatcag
atacggcctgacagacaaacacttatgtggagtgccacttggccaaaggaggtgcgccaa
ctggctgaggacttcctgcatgattatgtccagatcaacgtggggaacttagaactgagt
gccaatcataatatcctgcagatagtggatgtatgcatggagagcgaaaaggatcataaa
ttaatacagctgatggaagaaattatggctgaaaaggagaataagactattatcttcgtg
gaaacaaaacgacgatgtgatgacttaacacgaagaatgcgtagagatggttggccagct
atgtgtattcatggagacaagagtcaacctgaacgagattgggtgcttaatgaatttcgt
tctggaaaggctcctatcctcattgccacagatgttgcatctcgtgggctagatgtggaa
gatgtgaagtttgtgataaactacgactatccaaacagttcagaggattatgtgcataga
attggccgtactgcccgtagtaccaacaaaggcactgcctacacattcttcacaccagga
aatctgaaacaggctagagagttaataaaagttctagaagaagccaatcaagccatcaat
ccaaaactgatgcagctcgtggaccacagaggtggtggtggtggaggaggtggtcgttct
cgttaccgcacaagcaattcatccaacaatcctaatttgatgtaccaggaggagtgtgag
cgaaggctccggggagttaaggatggccgaagagactcaagtaatttccgggaacgtgat
cgcagtgacagttttgccaatggagccaacaaagcctatggtggtacttatggaaatgca
agttctgcgtttggagcacagcaaggccaatatggttatgcccagggagcctatggaact
gcagcttatggaacaagtggttatggggcagaatatagtgctgctgggtatgggggagcc
agcactgccactgctggaagaaactcacaaagcaccaatcaacagcagcaatatgcaggg
atgggccgttcaagccagcagccacagcctctcatgtcacaacagtttcctcagcctcct
ggcaccagtgtgataggctatatggggcagactgccagctaccagtatcctccaccgcca
ccaccccctcctccttcacgcaaatga
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