Crotalus tigris (Tiger rattlesnake): 120304868
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Entry
120304868 CDS
T08476
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120304868 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120304868 (SLIT2)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Axon guidance molecules
120304868 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_1
Laminin_G_2
LRR_9
LRRCT
hEGF
LRR_1
LRRNT
EGF_TEN
LRR_14
JAG1-like_EGF2
EGF_DL_JAG
EGF_TGFA-like
LRR_EndoS
EGF_Teneurin
FXa_inhibition
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120304868
NCBI-ProteinID:
XP_039191819
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MKLLLLLLLLLRPGAGGAQSCPPPCSCSGPSVDCHGLALRSVPRNLPRHAERLDLNGNNI
TRITRTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTP
KLYRLDLSENQIHAIPRKAFRGAVDIKNLQLDFNQISCIEDGAFRALRDLEVLTLNNNNI
TRLSVASFNHMPKLRTFRLHSNSLQCDCHLAWLSDWLRQRPRVGLYTQCTAPLHLRGHNI
AEVQKREFICSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLAEIPTNLPETIT
EIRLEQNSIKAIPAGAFSPYKKLRRIDLSNNQISEVAPDAFQGLRSLNSLVLYGNKITEL
PKSLFEGLFALQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFAPLRAIQ
TLHLAQNPFICDCHLKWLADYLHVNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQ
YFIPGTEDYRSKLSGNCFADLACPEKCRCEGTTVDCSSQKLSRIPEHLPQYTAELRLNNN
EFTVLEATGIFKKLPQLRKINLSNNKITDIEEGVFEGAAGVNELLLTSNRLENVRHKMLK
GLESLKTLMLRSNRISCVSNDSFTGLGSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA
NPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCEDGNDESSCSP
VSRCPAECACLDTVVRCSNKGLKTLPKAIPKEVTELYLDGNQFTLVPKELSNYKHLTLID
LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPTRTFDGLRSLRLLSLHGNDISVVPGG
AFNDLSALSHLAIGANPLHCDCHMQWLSDWVKSEYKEPGIARCVGPGEMADKLLLTTPSK
KFTCPGPVDVSILAKCSPCLSNPCKNEGTCNNDPVDFYSCSCPYGFKGRDCEVLIHACIS
NPCKEGGTCHLKEDEKDGFWCACADGFEGANCEVNIDDCEDNDCENNATCVDGINNYTCL
CPPEYTAAILNEVEKGELCEEKLDFCAQDLNPCQHQSKCILTPKGYQCSCTPGYVGEHCD
VDYDDCLDNKCKNGAQCTDAINGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDHYECQNGA
QCIMKASEPSCHCLSGYQGDRCEKLVSINFVNKETYLQIPSTKLLSHTNITLQISTDEDS
GILLYKGGNDHIAMELYRGRVRVSYDAGSYPVSAIYSVETINDGKFHMVELLVMDQILSL
SIDGGNPKTITNLSKQSTLNFDSPLYVGGLPVKKNVAALPQPPGQNATSFHGCLRNLFIN
SELQDFRNVPLQVGILPGCEPCLKKVCAHGTCQATSHSGFTCQCDEGWAGSLCDQQSGSP
CLGNKCVHGACLPISAFSYSCKCLQGYGGALCDEDGEVFNPCQPLRCKHGQCRLSGLGKP
YCECRSGYTGESCNKEISCREERIRDYFQKQQGYAACQTTEKVLRLECKGSCENGQCCRP
LRSKKRKYLFECTDGSSFVGEVEKVVRCGCTQQCLP
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctgctgctgctgctgctgctgctccggccgggcgcggggggggcgcagtcc
tgcccgccgccctgctcctgctccggccccagcgtggactgccacgggctggcgctgcgg
agcgtcccccggaacctgccccgccacgccgagcggctggatctcaatggaaataatatc
acaaggatcacaagaacggattttgctggtctaagacaccttcgtgttcttcaactcatg
gaaaacaagattactacaattgagagaggagcttttcaagacttaaaggagttggagaga
ctgaggctaaatagaaataatcttcaacttctctctgagttgctgtttctcgggacaccc
aaactctacagactggacctcagtgaaaaccagatacatgccatcccaaggaaggctttc
cgtggagctgttgacattaaaaatctgcaactggatttcaaccagatcagctgcatcgaa
gatggagcattcagagccctacgggatctggaagtcctcactctcaacaataacaacatc
acacgactctcggtggccagtttcaaccatatgcccaaactgcgaaccttccgccttcac
tcaaacagcctgcagtgtgattgccacttggcttggttatccgactggctacgtcaacga
ccccgagttggcctttacactcagtgtacggccccgttacacttgcgaggacataacata
gctgaggtgcagaaacgagaattcatctgcagcgatgaggaagaaggtcaccagtctttt
atggctccctcctgtagtgtgttgcactgccccgctgcctgtacctgtagtaacaacatt
gtggattgcagaggaaaaggcctggctgaaatccccaccaaccttccagaaaccattaca
gaaatacgattggaacaaaattcaatcaaggccattcctgcaggagctttctcaccctat
aaaaagctgagacgaattgatctgagcaataatcaaatctcagaggtcgcccctgacgcc
ttccagggtcttcgctcacttaattccctggttctctatggaaacaaaattactgaactt
cccaagagcctttttgaagggcttttcgctcttcagttgctattattaaatgcaaacaag
ataaactgcctgcgagtggacgctttccaagacttacataatttgaatctactttctttg
tatgacaacaagcttcagactattgcaaagggcacttttgctcctctccgagcaattcag
acgctgcatttggctcagaacccatttatctgtgactgtcatctgaagtggctggcagat
tatctccatgtaaaccccattgagaccagcggtgcccgctgtgccagcccccgccgtttg
gcgaacaaaaggattgggcagatcaaaagcaagaagtttcgctgttcagctaaagaacaa
tatttcattccaggcacagaagattaccgatccaaactgagcggcaattgctttgcggac
ttagcttgccctgaaaaatgccgttgcgaaggcaccacggtggattgttccagtcagaag
ctcagcaggattcccgagcatctccctcagtatacggcagaattgagactcaataacaat
gaatttacagtgctggaagccacggggattttcaagaagcttccccagctgcgtaaaata
aatctaagcaataacaagatcactgacattgaggaaggcgtattcgaaggagctgctggc
gtcaatgaacttctgctaaccagtaaccggctggaaaatgtacgacacaaaatgttgaaa
ggcctggaaagcctgaagactttaatgctaaggagcaaccgtatcagctgtgtgagcaat
gacagcttcacaggattgggttctgtccggctgctttccttgtacgataaccagataacc
accgtagctcccggtgccttcgatactcttcattctctctccacgctaaacctcttagcc
aaccccttcaattgcaactgccacttagcctggttgggagagtggttgcggaagaaacgc
attgtgaccggcaacccccggtgccagaagccgtacttcctcaaggagattcccatacag
gacgtcgccattcaggacttcacctgtgaagatgggaacgacgaaagcagctgctccccc
gtgtcccgctgtccagccgagtgcgcgtgtctggatactgtagttcgttgcagtaacaaa
ggactgaaaactctgccgaaagccatcccaaaagaggttaccgaactttatttagatgga
aaccagtttacccttgttcccaaagaattatcaaactacaagcacttaactttgatagat
ttaagcaacaacagaatcagcactctctcaaaccagagtttcagcaacatgactcagctg
ctcactttaattctcagttacaatcggctcagatgtattccaacacggacttttgatggc
ttaagatcccttagactgctgtctttacatggcaatgacatctctgttgttcctggaggt
gcttttaatgatctttcagcattatcccacctagcgattggcgcgaaccccctccactgc
gactgccacatgcagtggctctccgactgggtgaagtccgaatacaaggagccgggcatc
gcccggtgcgtgggccctggagaaatggccgacaaactcctcctcacaacgccctccaag
aagttcacctgcccaggtcccgtggatgtctccattcttgccaagtgtagcccctgctta
tccaacccctgcaaaaacgagggcacttgtaacaatgacccggtggatttctacagttgt
tcctgtccgtatggcttcaagggtcgagactgtgaggttctgatccatgcctgcatcagc
aacccatgtaaagaaggggggacttgccacttaaaagaagatgaaaaggatggattttgg
tgtgcttgtgcagacggatttgaaggggcaaactgtgaagtgaacattgatgattgtgaa
gataacgattgcgaaaacaatgccacttgcgtagatggaataaacaactacacttgcctt
tgtccaccagaatacacagctgctattctgaatgaggtggagaaaggggagctgtgtgag
gagaagctggatttctgtgcccaggacctgaacccctgccagcaccagtccaagtgcatc
ctgaccccaaagggataccagtgtagttgcacacctgggtatgttggtgaacactgtgat
gttgactacgatgactgcctggataacaaatgtaaaaatggagctcagtgcacagatgcc
atcaatggttacacctgtacatgccctgaagggtacagtggacttttctgcgagttttcg
cccccgatggtcttgcctcgcacaagcccctgtgatcactatgaatgtcagaacggggcc
cagtgcatcatgaaggccagcgagcccagctgccactgcctgtcaggttatcagggtgac
cgatgcgaaaagctggtcagcatcaactttgtcaacaaagaaacgtacctgcaaattcct
tcgacaaagcttctctcccacaccaacatcaccctccagatttccacagatgaagacagt
gggatcctgctgtataaaggagggaatgaccacatcgccatggaactttatcggggacgg
gtgagggtcagttatgacgcaggatcatacccagtctctgccatttacagcgttgagacc
atcaacgatgggaagttccacatggtggagttactagttatggaccagattctgtcacta
tccatcgatggaggaaaccccaaaaccatcaccaacctgtccaagcaatccactttgaac
ttcgactccccgctttatgttggaggcttgcctgtgaagaaaaacgtggccgcgttgccc
cagcctccaggccaaaatgccaccagtttccacggctgcctccgaaatctcttcatcaac
agcgagctgcaagattttaggaatgtcccgttgcaagtggggattctccccggctgcgag
ccgtgtctgaagaaggtctgcgctcacgggacttgccaggcaacgagtcactccggcttc
acctgccagtgcgacgaggggtgggccggctcgctttgtgaccagcagtccggcagccct
tgcctggggaacaaatgtgtacatggtgcctgcttgccaatcagtgcgttttcatacagt
tgtaaatgcctgcagggatacggaggcgccctctgcgatgaagatggggaggtgtttaac
ccctgccagcccctccgatgcaaacatggtcaatgcaggctttcaggccttggaaaacca
tattgcgaatgccgcagcggatatactggggagagctgcaataaagaaatctcttgccga
gaggaacgaatccgggattatttccaaaagcagcaaggttacgccgcgtgccaaacgacg
gagaaggttttgagactggagtgtaaagggagctgtgagaacggacagtgttgcaggcct
ctgagaagcaaaaagaggaaatatctttttgaatgcaccgacggctcctccttcgtaggc
gaggtggagaaagtggtcaggtgcggctgcacccagcagtgcctcccttaa
DBGET
integrated database retrieval system
