Crotalus tigris (Tiger rattlesnake): 120305004
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Entry
120305004 CDS
T08476
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04621
NOD-like receptor signaling pathway
ctig05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120305004 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120305004 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ctig04054
]
120305004 (NOD1)
Pattern recognition receptors [BR:
ctig04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120305004 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
LRR_4
NOD2_WH
AAA_22
AAA_16
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
120305004
NCBI-ProteinID:
XP_039192192
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MAEQLAGKTKITHKGTAGGDSLSFVNLLKVHRELLVNRIRNTQCLIDNLIKNDYFSIEDA
EIAAQYSTQADKVRKILDLAQSKGEEVAEYCLYVLQQADDAYYDLHPWLEEIGFHPSEVI
CSKAVENTDPVSRYQQKLKDELGRETKFVMSYAQKEDMLLEEIYSANIMEFLSHKNEKLS
NVHALEDLLTDSFGLINENGETIYVFGDAGIGKSMLLQKMQNLWSKNAFDIGAKFFFRFR
CRMFSCFKQEEAFCLKDLLFKYNCFPDQDQEEVFDFIVKFPHTVLFTFDGFDEIHSDFDL
SSIPEICSPIESIHPLALLVGLLSGKLLKGSRKILTARTGTEIDKNIVRKKVHLRGFSNS
NLKDYTKMFFKDEGCQTLVLNQLEANPNLSSLCSVPLFCWIIFKCFEHFHSAFDSHELPD
FTVTLTDIFLLMTEVHLNRIQKTNLLKKNNRSQEETYRSNKEKLFALSKIAYVGMQKSLF
VFEQEEVLSNLLEQDLHLGFLRAVPNYEDNIDQSSYEFLHLTLQSFFAAFYLVTDEKVGA
RDLLQFFAECSMRDTTVSSCLPLSWSKHYHPTGGDPFRNKEHFHFTNLFLCGLLSKARQK
LLRHLIPLRTVKKKRRILLAYFFESMKSHLKGLSRARLKEYKQVQVMPNFVWMLRCIYET
QSEKVGKGVAKCMRANYIKLTYCNAYSADCSAISFVMHHFQKHLALDLDNNNINDYGIKQ
LQPCFSHLAVLRVSVNQITDQGVRVLYEELSKFKIVSYLGLYNNQITDIGAKYVARLIEE
CPSLIYVKIGANKITTEGGKSLAYAIKKSKTMHEIGMWGNKIGDEGAKAFAEALRNHPTL
TNISLAFNGITTEGGKSLAEAMKHNNGVNIFWLTKNELDDEAAESFAEMVKVNKRLGHLW
LIQNQITIRGAKSLADALQDNTALKEICLNGNPISQEEAKVFENEKRLIGF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaactagctggtaaaacaaaaatcacacacaaaggtacagcaggaggagat
tcactgtccttcgtaaacttactgaaagtccatagagaattgctagtcaatcgaatccgc
aacacccagtgtttgattgacaacttgattaagaatgactatttctccatagaagatgca
gagattgctgcacagtattctacacaagcagacaaggtccgtaaaattctggatctagcc
cagagtaaaggtgaggaagttgcagagtattgcctgtatgtcctgcaacaagctgatgat
gcttactatgacttacatccctggttggaggagattggcttccacccatcagaagtcatt
tgtagcaaagctgtggaaaatactgacccagtcagcagatatcagcagaaacttaaagat
gaattgggtcgagaaacaaagttcgtcatgtcatatgcccaaaaggaggacatgttgctt
gaagaaatatattctgccaatattatggagtttctcagtcacaaaaatgagaaactcagt
aatgtgcatgccttagaagatctacttactgacagttttgggctgatcaatgaaaatgga
gagaccatctatgtctttggggatgctgggattggaaagtccatgttactgcaaaagatg
caaaatctctggtccaagaatgcctttgacataggggccaaattcttcttccgtttccga
tgccgaatgttcagctgctttaagcaagaagaagccttttgtttaaaggatcttctcttc
aagtataactgtttcccagatcaggatcaagaggaagtttttgacttcattgtaaaattc
cctcatactgtcttgtttacatttgatggttttgatgaaattcattctgattttgatctc
agtagtattcctgaaatctgctctcccattgaatctattcacccacttgctcttctggtg
ggcctcctcagtggaaagcttttgaagggatctagaaaaattctgacagccaggacaggg
acagaaattgataaaaacattgttcggaagaaagtacatctccgagggttttccaatagt
aacctgaaagactatactaaaatgttcttcaaagatgaaggatgtcaaactttagttctg
aatcaactggaagccaacccaaatctaagcagtttgtgttcagtgccattgttttgctgg
attatcttcaaatgttttgaacatttccactctgcgtttgatagccatgaactcccagac
tttactgtcactctaacggacattttcttgcttatgactgaagtccacctgaatcgtatt
cagaagacaaatttgctaaagaagaacaacagaagccaagaagaaacatacaggtcgaat
aaagagaaattgtttgcactgagtaaaatagcctacgtggggatgcagaaatctctcttt
gtctttgagcaagaggaagtcctcagcaacctccttgagcaggatttacatttaggattt
ctcagggcagttcctaattatgaagataatatagaccaatcttcctatgaattcctgcac
ttgacgttgcagtcattttttgcagctttttatctggtaacagatgagaaagtgggggcc
agggatttgctgcagttctttgctgaatgctccatgcgagacactactgtatcttcatgc
ttgcctctttcctggtcaaaacattaccacccaacaggaggagatcctttccgaaataaa
gagcattttcattttactaatctcttcttgtgtggcttgctttccaaggcaaggcagaaa
ctcttgaggcatctgattcctctgaggacagtcaagaagaaacggaggattcttctggcc
tatttttttgaaagcatgaagtctcatctgaagggtctctctcgggcaaggctgaaagaa
tacaaacaggtgcaagtaatgccaaactttgtttggatgctgagatgcatctatgaaact
cagagtgagaaagttggtaaaggggttgccaaatgcatgcgtgccaattacatcaagctg
acttactgcaatgcctactctgctgactgtagtgccatttcctttgttatgcatcatttc
cagaaacacttggcccttgatctggacaataacaacatcaatgattatggaattaagcaa
ctgcaaccttgctttagccatctggcagtactcagggtgagtgtgaaccaaatcacagat
caaggtgtgagagtgctttacgaggagctctccaaattcaaaattgtatcttatttgggc
ttatataacaaccagattactgatattggagcaaaatatgtggcaagactcattgaggaa
tgtccaagcctcatctatgttaagataggagcaaacaaaataacaaccgagggagggaaa
agtcttgcttatgccatcaagaaaagtaaaactatgcatgaaattggaatgtggggtaac
aagattggagatgaaggagcaaaggcttttgcagaggcattgagaaatcaccccacttta
accaatatcagtcttgcctttaacggcatcactacagaaggaggtaaaagccttgcagaa
gcgatgaaacacaacaatggtgtaaatatattttggctaacaaaaaatgagttggatgat
gaagcagctgagagttttgctgaaatggtaaaggttaacaagagattgggccatctgtgg
cttatacagaatcagattacaattcgaggagccaagagtttagctgatgctctccaggac
aatacagctctcaaagaaatctgcttaaacggaaatccaataagtcaagaggaggccaaa
gtctttgaaaatgaaaagagactcattggcttctga
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