Crotalus tigris (Tiger rattlesnake): 120305286
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Entry
120305286 CDS
T08476
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03430
Mismatch repair
ctig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120305286 (MLH1)
03460 Fanconi anemia pathway
120305286 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120305286 (MLH1)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120305286 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120305286
NCBI-ProteinID:
XP_039192824
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MALVAGVIRRLDETVVNRIAAGEVIQRPSNAIKEMIENCLDAKATNIQLTIKDGGLKLIQ
VQDNGSGIRKEDLDIVCERFTTSKLQTFDDLASISTYGFRGEALASISHIAHITITSKTA
DGKCAYRANYSDGKMKSVPKPCAGNQGTQITVEDLFYNVATRRKAFKNPSEEYAKILDVV
SRYAIHNSGISFSVKKQGDTVADIRTLSSNTTIDNIRCVFGNVVSRELIEVGCEDATLAF
KMKGFVTNANYSMKKCIFLLFINGRLVESTALRRAIETVYAAYLPKSTYPFLYISLEIAP
QNVDVNVHPTKHEVHFLHEDSILERVQQHIECKLLGSNSSRMYFTQTLLPAITAPSTEIV
KSTKSSAIQGNEKVYAHQKIRIDSRDQKLDAFLQPVNKTKTVELAVTEPEDNSNMQSCKT
TGVQDVEMEECDNLNTSVSRAEETLKGSMERQSMPIEAVPEKKRQRTDCDLEMEKNPQQE
MTAACTPRRRIINLTSVLTLQEEINKRANASLQEMLRDHSFVGSVSPQWALVQYQTKLYL
LNTTKLSQEMFYQILIYDFGNFGILRLSEPAPLFDLAMLALESAESGWTEEDGSKEGLAE
YIVDFLSKKSEMLRDYFSLEIDEGNLTGLPLLIDNYVPPLEGLPMFILRLATEINWDEEK
ECFDSLSKECAIFYSIRKQYIMEDSDLTTQQVEEPGKSMRSWKWTVEHILYKAFRSYLLP
PTNFREDGNILQLANLLDLYKVFERC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtagctggtgtcatccgtcggctagatgagacggtagtgaaccgtattgca
gccggagaggtcatccagcgaccctcgaatgccattaaagagatgatcgagaactgttta
gatgctaaagccaccaacatccagctgacaattaaagatggtggtttaaagcttattcag
gtacaagacaatggttctggaattaggaaggaagacttggatattgtgtgtgaaagattc
actacaagtaaactgcaaacttttgatgatctagctagtatttctacatatggatttaga
ggtgaggcattggctagtataagtcatattgctcatattactataacttctaaaacagct
gatggaaaatgtgcctatagggcaaattactctgatggaaaaatgaagagtgttccaaaa
ccatgtgcaggaaaccaaggaacccagatcacagttgaggatctattttacaatgtagcc
accaggagaaaagcttttaaaaatcctagtgaagaatatgcaaaaatactggatgttgtc
agcaggtatgccattcacaactctggcatcagtttttctgttaaaaagcaaggcgataca
gttgcagatataagaacactgtcaagtaatacaactatcgacaatattcggtgtgtcttt
ggaaatgttgttagcagagaattgattgaagtgggctgtgaagatgcaacattggctttt
aaaatgaaaggttttgtaacgaatgcaaactattccatgaagaagtgtatctttttactt
tttataaatggtcgactggtagagtcaactgcccttcgtagagcgatagagactgtatat
gctgcttatttacccaaaagcacgtatccatttttatatataagccttgagattgcacct
cagaatgtggatgtgaatgtgcatcctacaaagcatgaagttcatttcctgcatgaagac
agcatcctggaacgtgtacaacaacatatagagtgcaaattgttaggttccaactcatca
aggatgtatttcactcaaacattgttaccagccattacagccccttccactgaaattgtt
aaatcaacaaaatcttcagctattcaaggaaatgagaaggtttacgctcatcagaagatc
cgcattgactcacgggaccaaaaattggatgcttttcttcaaccagttaataaaactaag
actgtggaacttgctgtgacagaaccagaagacaacagcaacatgcaaagttgcaaaact
actggtgtacaagatgttgaaatggaagaatgtgataatttgaatacaagtgtctcaaga
gctgaagagacactgaaaggatcaatggaaagacaatcaatgcctattgaggcagtacct
gaaaaaaaaaggcagcgaacagattgtgatcttgaaatggaaaaaaatccacaacaggaa
atgactgctgcctgcactccaagaagaagaattattaacctaaccagtgtattgactctt
caagaagaaattaataaaagggcaaatgcaagtctgcaggagatgcttcgtgatcattcg
tttgttggaagtgttagtcctcaatgggcactggttcagtatcagacgaaactttatctt
ctgaataccacaaaactcagtcaagaaatgttctatcagatccttatttatgactttgga
aactttggaattttaagattatcagaaccagctcctctctttgatctcgctatgttggcc
ttggagagtgctgaaagtggttggacagaagaagatggttcaaaggaaggccttgctgaa
tatattgttgacttcctatcaaagaagagtgaaatgctaagagactatttctcccttgaa
attgatgagggaaatcttactggactacctcttctaatagataattatgttcctccactg
gaagggctacctatgtttatccttcgtttggccacagagataaactgggatgaagaaaag
gagtgttttgatagtcttagtaaagaatgtgccatattctactctattagaaagcagtat
ataatggaagattctgatcttactactcaacaggttgaagagcctggaaaaagtatgaga
tcatggaaatggacagtagaacatatactctacaaagcttttcggtcataccttttacct
cctacaaattttagagaagatggcaatattttgcaacttgctaatctacttgacttgtac
aaagtttttgagcggtgctaa
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