Crotalus tigris (Tiger rattlesnake): 120305542
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Entry
120305542 CDS
T08476
Symbol
EDC3
Name
(RefSeq) enhancer of mRNA-decapping protein 3
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120305542 (EDC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120305542 (EDC3)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120305542 (EDC3)
mRNA degradation factors
5'-3' decay
Decapping complex
120305542 (EDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Edc3_linker
YjeF_N
FDF
LSM14
DUF5096
Motif
Other DBs
NCBI-GeneID:
120305542
NCBI-ProteinID:
XP_039193476
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MATDWLGSIVSISCGDSLGVYQGRVSAVNQASQTISLTRPFHNGVKCLVPEVTFRAGDIT
ELKILEIPGLGDNGQCGDFQHPDLGIPALEGLGGASQNGTGKLLKKPSSAPQNIPRKTDA
KSEEVALSPQLHPCSKSYVDRHMESLNPSKNFRRRHNSWSSSSRHPNQVTPKKSGPKNGP
MKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAVFEEIETYERKSGTRSRGTPSEKAAR
YRHDENILASEPIVYRRITVPQPSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERR
LEMAGVCASQMALSLLGGPNRLNPKNIHQRPTVALLCGPHVKGAQGISCGRHLSNHDVDV
ILFLPNFVKMLESITNELTLFGKTQGQQVSSIKDLPETPVDLVINCLDCHENAFLRDQPW
YKAAVDWANQNRAPVLSLDPPVNEMEQEVDAKWSLALGLPLPLSERAGRLYLCDIGIPRK
VFQEVGINYHSPFGCKFVIPLHST
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctacagattggcttggaagcatcgtctcgatcagttgtggagatagcctgggagtc
taccagggaagagtgtcagctgtgaaccaagctagccagacaatttcactcacacggcct
ttccataacggagtcaaatgtttggtaccggaggttaccttcagggctggggacatcacc
gagctgaagattctggagattccaggcctcggcgataacggacagtgtggagatttccag
caccctgaccttggcattcccgctcttgagggcctgggtggtgccagtcagaatggcact
ggcaaattgctgaagaagcccagcagtgccccccagaacatccccaggaagaccgatgca
aagagcgaagaggttgccctttctccccaactgcacccatgttctaagagctacgtggat
cgacacatggaatccttgaacccgtcaaaaaacttccgccgcaggcacaactcgtggtcg
tccagtagccgccatcccaaccaggtgactccgaaaaaaagcggccccaagaacggcccg
atgaagaacaaggacgacgagtgctttggggacgacattgaggagatcccggacactgat
tttgactttgaggggaacctggcccttttcgacaaggccgccgtgttcgaggagatcgag
acctacgagaggaagagcgggacccgctcccgaggcacgccgagcgagaaggctgcccgg
tatcgccacgatgagaacatcctggcgtctgagcccatcgtgtacagaaggatcaccgtt
ccccagccgagcaaagagttctgcactgattctgggctggtggtcccaagtgtctcttac
gagctacacaaaaagctgctttccgtggctgagaaacacggcttgacgctggagcggagg
ctggagatggcgggggtgtgtgccagccagatggcactgagtttgctcggaggacccaac
aggctgaaccccaaaaacatccatcagcgacctaccgttgccttgttgtgcggccctcac
gtgaaaggggcccagggaatcagctgtgggcgacacctctccaatcacgacgtggatgtc
attctcttcctccccaatttcgtcaagatgctggaatccatcaccaatgaactgaccctg
ttcggcaagacgcaaggccagcaggtgtccagtattaaagatctcccagagacgcctgtg
gacctcgtgataaactgcttggattgccacgaaaacgctttcctgagggaccagccttgg
tacaaagcggccgtggactgggccaaccagaacagagcccccgtcctcagcttggaccct
cccgtgaacgaaatggagcaagaggtcgacgccaagtggtcgctggccttgggactgccg
ttgcccctgagcgagagggccggccgcctctatctctgcgacatcggcatcccccggaaa
gtgttccaggaggtgggcataaattaccactcgccctttggctgcaaatttgtcatcccg
ctgcactcgacctaa
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