Crotalus tigris (Tiger rattlesnake): 120305558
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Entry
120305558 CDS
T08476
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120305558 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120305558 (NEIL1)
Enzymes [BR:
ctig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120305558 (NEIL1)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120305558 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
120305558
NCBI-ProteinID:
XP_039193509
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MPEGPELFLASRYINAACAGITFTGKVEKSEVSKNPEVPFESDGYLISAASRGKELKLTL
TPIKQEGSKKPPMDLVFRFGMSGNFKLVPVSDVPKHAHLRFYTQEKPRRVLCYVDVRRFG
KWEVGGTWQPNRGPCVMLEYEQFRENILRNLSDKAFDKPICEALLNQKFFNGIGNYLRAE
ILYQSKIPPFEKARTVLEDLQRGLQLSGATTLSKKVKLKRENPDLLEVCHLLPMEVVNLG
SGKGYDPTNREDFAVFEEWLHCYSLPGMKYLRDANGRTIWFQGDPGPLAPKGGKSQKKKT
QAKSKPAVQSSKANKPKRNSSSSPAQKEVKGRRKLKPEDGVIQEKEDGSVVGKRASGPKT
RSQKSSSDLQESLPPSSPPPARKRRTPAQKKQSTSNLKI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggcccagaactctttctagcctccagatacatcaacgcagcttgtgcagga
attacgtttacggggaaggtagaaaaatccgaagttagcaaaaatccggaggtgcctttt
gagagcgacggatacctaatctcggctgcctcccggggcaaagagttgaagctcactctc
accccgattaagcaggagggttccaaaaagccccctatggatcttgtgttccgtttcggc
atgagtgggaatttcaaactggtcccagtttccgacgtgcccaaacacgctcacttgcgt
ttctatacccaagagaagccacgccgagttctctgctacgtggacgtccggcgttttggc
aagtgggaggtgggcggcacctggcaaccgaaccgagggccttgcgtcatgttggagtat
gaacagttcagggaaaacatcctgaggaatctctcggacaaggcctttgataagcccatc
tgtgaggctctgctaaaccagaagtttttcaatggaattggcaactacctccgggctgaa
attctttaccaatcaaaaatccctccctttgagaaagcacggaccgttctggaagatctg
cagcgtggactgcagctttcgggtgcgacaactctcagcaagaaagtgaaattgaaacga
gagaaccccgacttgctggaggtctgtcacctgttgcccatggaggttgtgaatctagga
agtggcaagggatatgaccccaccaaccgagaagattttgccgtctttgaagagtggctg
cactgttactcccttccaggcatgaaatacctgcgtgatgccaacggcaggaccatctgg
ttccagggagaccctggaccgctggccccaaaaggggggaaatctcagaaaaagaagaca
caagcaaagtctaaaccagctgtgcagagttcaaaggccaacaagccaaagaggaactca
agcagcagccctgctcagaaagaagttaagggaaggaggaaacttaaaccagaggatgga
gttattcaagaaaaggaggatggcagcgtggtgggcaagagagccagcggtcccaagacc
agatctcagaaatcgtcttccgatttgcaagaatcgttgccgccaagttcaccacctcca
gcacggaagagacgaacgcctgctcagaaaaaacagagcaccagcaatctcaagatctaa
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