Crotalus tigris (Tiger rattlesnake): 120306031
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Entry
120306031 CDS
T08476
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctig03009
]
120306031 (DDX10)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120306031 (DDX10)
Ribosome biogenesis [BR:
ctig03009
]
Eukaryotic type
90S particles
Helicases
120306031 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
120306031
NCBI-ProteinID:
XP_039194528
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MEESRRVVSGSDADPVRNFERWKKRYAKRKDKQRQQRKQKKPEWEVERESIAALERRYTE
INTNDITRFSDFPLSRKTLKGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA
FIVPALEILYRQQWTAMDELGVLIISPTRELAYQTFEVLRKVGKNHEFSAGLIIGGKDLK
QESSKIHNMNILICTPGRLLQHMDETSYFHASNLQMLILDEADRILDMGFADTMNAIIEN
LPKKRQTLLFSATQTKSVKDLARLSLKDPEYIWVHEKAKFSTPATLEQNYIVCELHQKVN
MLYSFLKTHLNKKSIVFFASCKEVQYLFRVFCRLRPGLPILALHGKQQQMKRMEVYQDFL
RKKSAVLFATDLAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPS
EENGMIQQLSQKKVPVSNIKINPEKLLDVQKKLQSLLAQDQDLKERAQRCFVSYLRSVYL
MKNKEVFDVLKLSIAEYALSLGLAVAPRVRFLQKVQKKMHTMEPEKEGTEQAEDTQFSLT
DEDLEKCRRIFSRTGMLGQKETEGKSSPDEEALQSPSELEELAKVHESKPESLIFFEDDD
DDDDNDASKDVLIVKRRNVFGLESEEKAPLATQNVKVKKKITKTKEAKKVLKRNFKVNTK
IVFTEDGELIQQWPPAQKSTLKEEEDGDDCNGINLDKAKERLQEEDKFDKEEYRKKIKEK
HREKRLKEKAARREARKMNAKIEEDTVALLDHSDSDEEFDPSTLPDPDGPKDEEQEILPK
NHSKRGMDKQQLDGSKSEGETTQKRKKMKTNQEDSFLPLDTGLSLAEDEALVVQLLNN
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagtcggagagtcgtgtcgggttcggacgccgacccggtgcgcaacttcgag
cgttggaaaaagaggtacgccaaacgcaaagacaagcagcggcaacagcgcaaacaaaag
aaaccggagtgggaagtggagagggagtcaatcgccgctttggaaaggcgctacacagag
ataaatacaaatgacattacaagattttctgatttcccactatccaggaaaactctgaaa
ggcttacaggaagctcagtatcgcatggtgactgaaatccagaagcagaccataggtttg
gcattgcagggtaaagatgtgttgggagctgccaagacaggatccggcaaaacgttggct
ttcattgtacctgctctagaaatcttataccgccaacagtggactgccatggatgaactg
ggtgttttgataatatctcctaccagagaattggcttaccagacgtttgaagtcctgcgt
aaagtggggaaaaatcatgaattttctgcaggtctaatcattggtggaaaggacttgaaa
caagaatcaagcaaaatccataatatgaatatcctcatttgtactcctggtcgtctttta
caacacatggatgaaacctcgtatttccatgcctccaatcttcaaatgctgatccttgat
gaagctgatagaattctggacatgggcttcgctgataccatgaatgcaattatagagaac
cttcccaaaaaacggcagaccctgcttttctcagccacgcagaccaaatctgtgaaggac
cttgctcggttgagcttgaaggatccagaatacatctgggtgcatgaaaaagcaaagttc
agtactccagcaactttggaacagaactacattgtttgtgaactgcaccagaaagtcaat
atgttgtactcttttctgaaaactcacctgaataagaagagtattgtattttttgcaagc
tgtaaagaggttcagtacttgtttagagtattttgtcgccttcgtccgggtctccctata
ctagctcttcatggcaaacaacaacagatgaaaagaatggaagtatatcaagattttttg
cgcaagaaatcggcagttctttttgctacggatcttgcagctcgtgggctagatttccct
gctgtgaactgggtcattcagtttgactgcccagaagatgcaaatacatatattcacaga
gttgggagaacagccagatacaaagaaggtggtgaagctctcctcgttttgcttccttca
gaggaaaatggcatgattcagcagctgtcacagaaaaaagttcctgtcagcaatatcaaa
atcaatcctgagaaacttttagatgtccagaagaaactgcagtccttactggctcaggat
caagatttgaaagaacgtgcacaacggtgttttgtttcttacctacgatctgtctatcta
atgaagaacaaagaagtctttgatgtgttaaagttatccattgctgaatatgccctctct
cttggacttgcagtggcccctcgtgtccgatttctccagaaagtccagaagaaaatgcat
acaatggagcctgagaaagaggggactgagcaggctgaggacacacagttttctttaact
gatgaggacttggagaaatgcaggagaattttctctagaacaggcatgttgggacaaaaa
gagacagaagggaaaagcagtcctgatgaagaagcattgcagagtccgtctgagctagaa
gaacttgcaaaagtccatgaatcaaaacctgaaagcctaattttttttgaagatgatgat
gatgacgacgacaatgatgcctctaaggatgtgttgattgtaaaacggcgaaatgtattt
ggcttagaatcagaagagaaagcaccattggctacacagaatgtaaaggtgaagaagaaa
ataactaagacaaaagaagctaaaaaggttttgaagagaaattttaaagtaaatacaaaa
attgtatttactgaagatggagagttaattcagcagtggccaccagcacaaaaatctacc
ctgaaggaagaggaagatggtgatgattgtaatgggatcaatctagacaaagcaaaagaa
agacttcaggaagaggataaatttgacaaagaggaatataggaagaaaattaaagaaaaa
cacagggagaaaaggcttaaagaaaaggcagctagaagggaagccaggaagatgaatgca
aagattgaagaggacactgtagctcttctggatcacagtgacagtgatgaggaatttgat
ccaagtacacttccagatccagatggccccaaagatgaggaacaagaaattcttccaaaa
aaccacagcaaacgtggaatggataagcagcagttggatggaagcaaatcagaaggggaa
acaacacaaaagaggaagaagatgaaaactaaccaagaggactcttttctaccattagat
acaggtctttcccttgcagaagatgaagcattagtagtacagttgctcaacaattaa
DBGET
integrated database retrieval system
