Crotalus tigris (Tiger rattlesnake): 120306204
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Entry
120306204 CDS
T08476
Name
(RefSeq) hedgehog-interacting protein isoform X1
KO
K06231
hedgehog interacting protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120306204
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Motif
Pfam:
GSDH
EGF_2
JAG1-like_EGF2
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
120306204
NCBI-ProteinID:
XP_039194894
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MVGLKMLPLKLLLVALVLCFFEGETKFGETTAKRRRCLNGSPPRRLKKRDRRLMLLEPPN
RGELLCQGFYPRLSCCSRAERQGLLQIESNKIFSVTNNTECVKLLQEIRCAHCSPNAQNL
FHSTVKEALERELALPFLCKDYCKEFYYTCRGHIPGLLQITADDFCFYYARKDGGFCFPD
FPRKQVRGPSSNYLDQIEEYGKEEDISRKHKHNCFCLHEVVSGFRQPVGAVHSGDGSHRL
FILEKEGYVKILTPEGDIVKEPFLDIHKVVQSGIKGGDERGLLSLAFHPDYKKNGKLYVS
YTTNQERWAIGPHDHILRIVEYTVSRKNPHQVDMRTTRPFLEVAELHRKHLGGQLFFDAD
GFLYVILGDGMITIDDMEEMDGLSDFTGSVLRLDVDTDFCHVPYSIPQSNPHFNSTNQPP
EIFAHGLHNPGRCAVDRHPTEVNINLTILCSDSNEKNRSSARIIQIIKGKDYESEPSLLE
FKPFSSGPLIGGFIYRGCQSERLHGSYLFADRNGNFLTLQQSPITRKWQEKPLCLGNSVS
CQGFFAGHILGFGEDESGEVYILASSKSMTQSLNGKLYKIIDPKRPLDPEECKRTAFPAQ
ILTSECSRHCQNGHCTPTGKCCCNQGWEGEFCRSAKCDPVCRHGGVCIRPNKCLCKKGYL
GSQCEQMDRNIRRVTRAGGIIYMEIPLEATENITDVTMNSLMFYQC
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctaaagatgcttccactgaagctgctcttagtggccctggtcctctgcttc
tttgaaggggaaaccaagtttggcgagaccacggccaagaggagaaggtgcttgaatggc
agcccccccagacgcctcaaaaagcgcgataggaggctgatgctcctggagccccccaac
agaggggagctgctgtgccagggattctacccccgcctgtcctgctgctccagggctgag
aggcaaggattgctccagatagagagcaacaagatcttttctgttaccaacaacacagaa
tgtgtgaagctgctgcaggaaatcagatgcgctcactgttcaccgaatgctcagaatctg
ttccactcaactgtgaaggaagctttggaaagagaactagcccttcctttcctatgcaag
gattattgcaaagaattctattacacttgcagaggtcatatcccaggtttgctccaaatt
actgctgatgacttttgtttctactatgcaagaaaagatggtggtttctgctttccagat
tttccaagaaaacaagttcgaggaccatcttctaactatttggatcaaatagaagaatat
ggcaaagaagaagatataagcaggaaacataaacacaattgcttttgcctccatgaagtt
gtaagtggtttcaggcaacctgttggagcagtacattctggagatggatcacaccgtctt
ttcatccttgagaaagaaggatatgtgaaaatattaacacccgaaggagatatagtcaaa
gaaccatttctggacatacacaaggttgttcaaagtggaataaagggtggagatgaaaga
gggctcctaagtcttgcattccatcccgattacaaaaaaaatgggaagctctatgtgtcc
tatacaaccaaccaagaacgatgggctattgggcctcatgaccatattcttcggatagta
gaatacactgtgtccaggaagaatccacaccaagttgatatgaggactacaagacctttc
ctagaagttgcagaactacatagaaaacatcttggaggacagctgttcttcgatgctgat
gggtttttatatgtaatccttggtgatggaatgattacaatagatgatatggaggagatg
gatggtctgagtgattttacaggttctgtactgcgcttggatgtagacaccgatttctgc
catgtgccttattccataccacaatctaacccacattttaacagtactaatcagcctcct
gaaatttttgcccatggactccataatccaggcaggtgtgcagtggatcgccatccaaca
gaagtaaatattaatttaacaatactttgttcagactcgaatgagaagaacagatcatca
gcaaggatcattcagataataaaaggaaaagattatgaaagcgaaccttcacttttagaa
tttaagccgttcagttccggaccactgattggtggatttatatacagaggctgccaatct
gaaagactgcatggaagttacctatttgcagaccgcaatggaaattttttaacattacaa
cagagtcctattacaagaaagtggcaagaaaaaccattatgtctgggcaacagtgtttca
tgtcagggtttctttgctggacacattttaggatttggtgaagatgaatcgggtgaggtt
tacatcttagcaagcagtaaaagcatgacacagtctctcaatggaaaactctataaaatc
attgatcccaaaaggcctttagatccagaagaatgtaaaagaacagcatttcctgcccag
atattgacatctgaatgctcaaggcattgccaaaatgggcattgtactcccactggaaaa
tgttgttgtaatcaaggctgggaaggtgaattctgccgatctgcaaagtgtgatccagtc
tgtcgacatggtggtgtctgcatacgaccaaataaatgcttatgtaaaaaaggatacctt
ggttctcaatgtgaacaaatggacagaaacatccgaagagtgacaagggcaggtggaata
atttacatggaaattccactggaagcaacagaaaatatcactgatgtcactatgaattct
ttgatgttctaccaatgttaa
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