Crotalus tigris (Tiger rattlesnake): 120306347
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Entry
120306347 CDS
T08476
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120306347 (HCN4)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
120306347 (HCN4)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
120306347
NCBI-ProteinID:
XP_039195375
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MERLPPSMRKRLYSLPPQIAPKASLVDEEEEEEEEEEEDAGGGGGGGCKDARRKSIRLQP
LSPSAVPAAPAGASAEPSRPGRGSRAGEGGPADGAEAGGGGGGRPGPKSSTNGDCRRLKG
SRSSLAGRHPPDSGEGRRLIGHEGEAASPGDERGPWGLADGPDPAAASSSSPPAAAAPRQ
EPAAAAAAFVKVEGAGPSGEQISPDDEQRLDPAGFMQRQFGALLQPGVNKFSLRMFGSQK
AVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVF
NVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLI
VETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRI
GNLIGMMLLLCHWDGCLQFLVPMLQEFPGDCWVSLNRMVNDSWGKQYSYALFKAMSHMLC
IGYGQQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYM
SFHKLPAEMRQRIHDYYEHRYQGKMFDEESILGELSEPLKEEIINFNCRKLVASMPLFAN
ADPNFVTSMLTKLRFEVFQPGDYIIREGTIGTKMYFIQHGVVSVLTKGNKETKLADGSYF
GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKN
SILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHNVQAATAAAASTPTPVIWTPL
IQAPLQAAAATTSVAIALTHHPRLPTAIFRPPVSVLGSLGQPQSQTPRRLRRLHSLVSSA
GPSIVGSPSSTPSQQHTPGLETLSSSSFQIQQLAGFSASTSLGPLHRSLASSPSVGSTQQ
NLGSPTSTRLGQLCPGPLDLTEGAAQLQPSDTSFGPFQKAPPSSPPATTPSSFPQLSSNS
PVSPCSRLQPTGRPHSTGQLLQLSGTGGTNHFQLPPLSSSPSSGLRQLAQASGGPPPTSS
PTQPSALGPSAEPATVAQLHQERSSFTSLTPSKPGSMAPPLYPRPSGLSPPSQSLPSRTF
QCGPLGTLGSQDSLLLPQTSSPPAQVLQPRSRPLILPGRLTQDLKLISASQPSLPHEAAQ
TSSPHSSSRESISSFSSFSGGGNGSDIRGGPRPLGKPYSSGPGRITLPRQTSSGSLPQPP
PFAISSSLPTAERKGSLQLSGEQEPTRSKLPSNL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtctgccgccgtcgatgcgcaagcggctctacagcctcccgccgcagatcgcg
cccaaagcctcgctggtggacgaagaggaggaggaggaggaagaggaggaggaggacgcg
gggggcggcggcggcgggggctgcaaggacgcgcggcgcaagagcatccgcctccagccg
ctctcgccctcggccgtccccgccgccccggcgggagcttccgcggagccgtcgaggccc
ggccggggctccagagccggcgagggcggccctgcggacggggccgaggcggggggcggc
gggggcggccggccgggccccaaaagcagcaccaacggcgactgtcggcgtctgaagggc
agccgctcctcgctggccggccgccacccgcccgactcgggcgagggtcgccgcctgatc
ggccacgaaggcgaggccgcctccccgggcgacgagcggggcccctgggggctcgcggac
ggtccggaccccgccgccgcctcctcttcctcgcccccggcggccgctgccccccgccag
gagccggcggcggccgcggcggccttcgtcaaggtggagggcgccgggccgtcgggcgag
cagatcagcccggacgacgagcagcggctggacccagccggtttcatgcagcggcagttc
ggcgctctgctgcagcccggtgtgaacaaattctccctgcggatgttcggcagtcagaaa
gcggtggagcgggagcaggagagggtcaagtcggccggcttctggatcatccacccttac
agcgatttcagattctattgggacctcaccatgttgctcctcatggttggaaatctgatc
atcatcccagtaggcatcaccttcttcaaggatgagaacaccaccccatggattgtcttc
aacgtggtctcagacaccttcttcctcattgacttggtcctcaatttccgcacggggatt
gtggtggaggacaacacggagatcatccttgacccccagaggattaagatgaagtatctc
aaaagctggtttgtggtggattttatctcatccatcccagtagactacattttcctgatt
gtggagacccgcatcgattcggaggtgtacaagacagcccgagctctgcggattgtccgt
tttaccaaaatcctcagccttttgagacttctgagactgtctaggctcatacggtatatt
catcaatgggaagagatcttccatatgacctatgacctggccagtgccgtggtacggatc
ggcaacttgatcggcatgatgctgttgctgtgccattgggatggctgtctccagttcctg
gtgcccatgctccaagaatttccgggggactgttgggtgtcgctgaaccgcatggtgaat
gattcctggggaaagcaatactcctatgcgctgttcaaggctatgagtcacatgctgtgt
atcggctatggacagcaagccccagtgggcatgtctgacgtgtggctcacaatgttaagc
atgatcgttggtgccacctgctatgccatgttcatcggccacgccacggcccttatccag
tctctggattcctcacggcgacagtatcaggagaagtacaagcaagtcgaacaatacatg
tctttccataaacttccagctgagatgcgccagagaatacatgactactatgaacatcgg
tatcagggcaaaatgtttgatgaagagagcatcctgggagaactgagcgaaccccttaaa
gaggagatcatcaactttaactgcaggaaactggtggcttccatgcctctattcgccaat
gccgatcccaattttgtaacctccatgctgaccaagctgcgttttgaggtcttccagcca
ggggactacataattcgagaaggcaccatcgggacgaagatgtacttcatccaacatggg
gtggtgagtgtgctcaccaaaggcaacaaggagaccaagctggccgacggttcctacttt
ggagaaatttgcctgctgactcgtggccgacgcacagccagcgtgagagctgacacgtac
tgccgcctctactcactttcggtggacaacttcaatgaagtattagaggaatatcccatg
atgagaagggcctttgaaacagtggcactggatagattggaccgcattggtaagaagaac
tccatccttctccacaaggtccaacacgacctcaactcgggcgtcttcaattaccaggag
aacgagatcatccaacaaattgtgcagcacgacagagaaatggcccactgcgcccacaat
gtccaagcggcaacggcagcagcagcctcgactcccacgcctgttatttggaccccgctg
atccaggctcctctgcaggctgctgcagccaccacttcagtagcaatagcgctgactcac
cacccacgccttcccacagccattttccgcccgccggtctccgttctgggttctctgggg
cagccgcaaagccagactccgaggcgcttgaggcggctccattccttggtgtcttctgct
ggaccttccatcgtgggatccccgtcaagcacgccgtcccaacagcacacgccggggttg
gagaccctttcctcctcctccttccagatccagcagttggctgggttttccgcatcaacc
agcttgggtcccttgcaccggtccttggccagctctccttccgttgggtcaacgcaacaa
aacctgggcagccccacctctaccagactggggcagctgtgtcctgggcctctagatctg
actgaaggggccgctcagttgcagccttcagacaccagctttggcccattccagaaggct
cccccgagttcgccaccagccaccaccccctcctcgttccctcaactctcctcaaattcc
cctgttagtccttgcagccgcttgcaacctacgggcaggcctcactccacggggcagctg
ttgcagctctcaggaactggagggaccaaccacttccagttgccccctttgtccagttct
ccctcttctggcttacgccagctagcccaggcctcaggaggcccccctcctacctccagc
cccacccagccaagtgcattaggcccttctgctgagccggccactgtcgctcagttgcac
caggaacggtcctccttcacctccctgactccctcaaagcccggttccatggccccaccc
ttgtacccacgaccatcaggccttagccctcccagtcaaagcttgccctccaggactttc
cagtgtggcccgttggggacgctgggttctcaagactctttgctcctgcctcagacctcc
agcccacctgcccaggtgctccagcctcggagtcgaccgctgattttgccaggacgatta
acccaggacctcaagttgatctccgcttcccaaccgtctctgccccacgaagcagcgcag
acttcaagcccccattcctcctcccgagagtccatttctagcttctcctcattttccggc
ggaggcaacggcagtgacatcaggggaggccccagacctctggggaagccatatagctcg
gggccaggacggatcaccttaccacgccaaacatcctcaggttctctgccccaaccccca
ccatttgccatctcctcctctctgcccactgctgagaggaaaggatctctacagctgagt
ggggaacaagagcccacccgctcaaaacttccttccaacttgtga
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