Crotalus tigris (Tiger rattlesnake): 120306348
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Entry
120306348 CDS
T08476
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04350
TGF-beta signaling pathway
ctig04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120306348 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120306348 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120306348 (NEO1)
Cell adhesion molecules [BR:
ctig04515
]
Immunoglobulin superfamily
DCC/UNC5 family
120306348 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
fn3_4
V-set_CD47
Herpes_UL74
EphA2_TM
Arylsulfotran_N
TM_ErbB1
TMEM154
Motif
Other DBs
NCBI-GeneID:
120306348
NCBI-ProteinID:
XP_039195376
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MAARGAWRRLLLLSSLWVALLGGQRPDSAARSAAAAAAAPPQQQPAEPTVRTFTPFYFLV
EPVDTLSVRASSVILNCSAYCESPPKIEWRKDGTFLNLVSDDRRQLLPDGSLLINSVVHS
KHNKPDEGHYQCVATVENLGTIVSRTAKLTVAGLPRFITQPESASVHRGNPIVLNCEVNA
DLAPFVRWELDHQPLFLDDRVLRLPSGTLIVSNATDEDAGTYCCVIEIGGSPKYSDEAEI
KVLPESDISSDLLFLKQPLSLTKVTGQSAVLPCVAAGIPVPLIRWTRNAEELVTENSHKF
LFLSGGTLKINVISEDDSGTYTCIADNGNETIEAPADLTVQVPPTFLKQPTNIYAHESMD
IVFECDVSGKPTPVVKWVKNGDVVIPSDYFKIVNEHNLQVLGLVKSDEGFYQCIAENDVG
NIQSGAQLIILDHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKL
TWRTPASDPQGDNLTYSVFYTKEMSNRERVENTSHPGEMQVTVQNLMPETVYIFRVVAQN
KHGPGESSVPLKVATQPEVQLPGPAPNIRAYATSPTSITVTWGTPLSGNGEIQNYKLYYM
EKGTENEQDIDVGGLSYTIIGLKKYTEYSFRVVAYNKHGPGVSTQDVVIRTLSDVPSAAP
QNLTLEVQNSKSIMMHWQPPPTGTHNGQITGYKIRYRKVIRKSDVTEIIVGTQLSQLIEG
LERGTEYSFRVAALTVNGTGIATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSW
TPPENQNIVVRGYAIGYGVGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAYNNVGEG
IPLYESAVTRAYTDTSEVDLFVVNAPYTPVPDPSPMMPPVGVQASILSHDTVRITWADNS
LPKNQKVSDARYYTVRWKTNIPANTKYKTANTTTLSFLVTGLKPNTLYEFSVMVTKGRRA
STWSMTAHGTTFEQVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYNTDA
NAEIHDWVIEPVVGNRLTHQIQELTLDTAYYFKIQARNSKGMGPMSEAVQFRTPKAESSD
KMSNDQALGSAGKGNRPVDVGTDYKTPISGSNSPHGSPSPLEYNMLLIIIVSVGVITIVV
VVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSP
DPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMM
PFDSQPPQPVVSAHPIHSLDNPHHHFHSGSLASPTCNYLHHQANLWPVGTSVSHSDRANS
TETIRNTPSTDTMPASSSQTCCAEHQEPESASASYLPSTQEEETGQNLPTAHVRPSHPLK
SFAVPAVPPSGSAYDPALPSTPLLSQQASSHPVHSVKTASIGTLGRTRPPMPVVVPSAPE
VQETTRMLEDTESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggcgcctggcggcggctgctgctgctcagctcgctctgggtcgcgctg
ctcggcgggcagcgccccgactcggccgcccggagcgccgccgctgccgccgccgcgccg
cctcagcagcagcccgcagaacccacggtgagaacctttactccgttttatttcctagta
gaaccagtggacactctgtcagttagagcttcttctgttatactgaactgttcagcatat
tgtgaatcacctccaaaaattgaatggagaaaggatgggactttcttgaacttggtatcc
gacgaccgccggcagttattaccagatggatctttgttaatcaacagcgttgtccattcc
aagcacaataaacctgatgaaggtcattaccagtgtgtggcaacggtggagaatcttggc
accattgtaagcaggacagctaagcttacagttgcagggcttccaagattcattacccag
ccagagtctgcctctgtccatagaggaaaccccatagttcttaactgtgaagttaatgct
gatctagcaccatttgtcaggtgggagttggaccatcagcccctctttctggatgatcgt
gtactcagattgccaagtggaactttaattgtcagcaatgctacagatgaggacgccgga
acatactgttgtgttattgaaattggtggatctcccaaatacagtgacgaagcagagatt
aaagttcttccagaatctgacatttcttcagacctgctcttcctgaaacagcccctttcc
ctcaccaaggtgactgggcagagcgcagttttaccgtgtgttgctgcaggcattcctgtt
cctctgatccgatggacaagaaacgcagaagagcttgttaccgaaaattctcacaaattt
ctgttcctgtctgggggaactctgaagataaatgttatcagcgaagatgattcaggaaca
tatacttgcatcgcggataatgggaatgaaactattgaagctccagctgatctcactgtg
caggtgcctcccacgtttctgaagcagcccactaatatttatgcacatgaatccatggat
attgtgtttgaatgtgatgtgagtggaaagccaactcccgtggtcaaatgggtaaagaat
ggagatgtggttatccctagtgactactttaaaattgtaaatgagcacaacctacaggtt
ttgggtttggtgaaatcagatgaaggtttttatcagtgtattgcagaaaatgatgtggga
aatatacagtctggagcccagctgataatactggatcatgatgttgccatcccaacatta
cctcccacttcactgaccagtgccactactgaccatctagcaccagctacaactggacct
ttgccttctgcccctcgagacgttgtggcgtcccttgtgtctactcgtttcatcaagcta
acatggaggactcctgcatctgacccacagggagacaatcttacctactcagtgttctac
accaaggaaatgagtaacagggagcgtgttgaaaacaccagtcatcccggagaaatgcaa
gtgacagtccaaaacctgatgcctgaaacagtatatattttcagagtggttgcacaaaac
aaacatggacctggggagagctcagtaccgttgaaagtagccacccaacctgaggttcag
cttccaggtccagcccccaacattcgtgcgtacgctacctctcccacatcaatcactgtt
acttggggtacacccttatctggcaatggtgagattcagaactacaaactgtattacatg
gagaaagggacagagaatgaacaggacattgatgttggaggtctttcctatacaataatt
ggtttgaaaaaatacacagaatatagtttcagagttgtggcctacaataagcatggtcca
ggagtctctactcaagatgttgtcattcgaaccctgtcagatgttcccagtgctgcgccc
cagaatctaacactagaagtgcaaaactccaagagcattatgatgcattggcagccgcct
cccacaggaacacacaatgggcaaattactggctataagattcgctaccgaaaagtgata
cgcaaaagtgatgtcaccgaaattattgtggggacacaactttcacagctcattgaaggt
ttggaacgaggtaccgagtacagcttccgagtggctgccttaacagttaatggcacagga
atagctacggattggatatcagcagaaacatttgaaagcgacctcgatgaaactcgtgtt
ccagaagtgccaagttccttgcacgtacgtccacttgtaaccagtattgttgtcagctgg
accccaccagaaaaccaaaacattgtggtcagaggctatgctatagggtatggcgtaggc
agtccccacgctcagaccatcaaggtggattataagcaacgatactacactattgaaaat
ttggatcccagttcccattatgtgataactttgaaagcatataacaacgttggtgaagga
attcctctttatgaaagtgcagtgactagagcctatacagacacttctgaagttgattta
tttgttgttaatgctccatacactccagtgccagacccctcccccatgatgccacccgtg
ggagttcaggcttccatcttgagccacgacaccgttcgtattacctgggcagacaattct
ctgccaaagaaccagaaggtttcagatgcccgttactatacagtccgctggaaaaccaac
atccctgcaaacacaaagtacaagacagcaaatacgacaaccttaagcttcttggtcacc
ggcttaaaaccaaacactttatacgagttctctgtcatggtgacaaaaggccgaagagca
agcacatggagcatgacagcccatggcactacttttgagcaagttccaacttctccaccc
aaagatgtaacggtggtaagcaaagaaggaaagcccaggactataattgtcaactggcag
cctccatctgaagccaatggcaaaattacaggctatataatttactataacaccgatgcc
aatgctgaaatacacgattgggtcattgaacccgtcgtaggcaatagactgacccaccag
attcaagagctgacccttgacacagcgtattatttcaagatccaagcccggaactccaaa
ggcatgggccctatgtcagaggccgttcagttcaggacacctaaagctgaatcatcagat
aaaatgtctaatgatcaagcattgggatctgcaggaaaaggaaatcggccagtggatgtt
ggaacagattataaaacacccatcagtggaagcaacagccctcatggcagcccctccccc
ctagaatacaatatgcttctgataataattgtgtctgtgggagtgatcaccattgtggtt
gtagtgattgttgctgtattttgcacacgacggaccacctctcaccaaaaaaaaaaacga
gccgcttgtaaatctgtgaatgggtctcataaatacaaaggcaattccaaggacgtcaag
ccaccggatctttggatccatcacgagaggctggagctgaagcctattgataaatctcca
gatcctaatcctatcatgaccgatacgccaatccctcgtaattcccaagacatcacaccc
gttgacaactctatggacagcaacattcaccagagacgaaactcatacagagggcatgag
tcagaggatagcatgtccaccctggcaggaagaagagggatgcggccaaagatgatgatg
ccctttgattctcaacctcctcaacctgtggttagtgctcatcccatccattctcttgat
aaccctcaccatcatttccactccggcagcctggcctctccaacctgcaactatctccat
catcaggcaaacctatggccagttggcacatctgtgtcccattcagacagggctaattcc
acagaaacgattcgaaatacgcccagcacagacaccatgccagcttcttcgtctcagaca
tgttgtgccgaacaccaagagccagagagtgcgtcggcatcctaccttcccagtacccag
gaagaggaaacgggccagaatctccccactgcccacgtccgtccctctcatcctctgaag
agcttcgctgtgccagccgtcccgccctctggcagcgcttacgaccctgccttgccaagc
acccctttactatcccagcaagcttctagccatccagttcattcagtgaagacagcatcc
attggaactctaggcaggactcggcctcccatgccagttgtagtcccgagtgcccctgaa
gtgcaggaaaccacaaggatgcttgaagacacagaaagtaattacgaaccggatgaactc
accaaagagatggcccacctggaaggactaatgaaggaccttaacgccatcaccacagcg
tga
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integrated database retrieval system