Crotalus tigris (Tiger rattlesnake): 120306397
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Entry
120306397 CDS
T08476
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120306397 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120306397 (MYO5A)
04131 Membrane trafficking [BR:
ctig04131
]
120306397 (MYO5A)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120306397 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctig04812
]
120306397 (MYO5A)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120306397 (MYO5A)
mRNA cycle factors
P-body specific factors
120306397 (MYO5A)
Membrane trafficking [BR:
ctig04131
]
Others
Actin-binding proteins
Myosins
120306397 (MYO5A)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120306397 (MYO5A)
Cytoskeleton proteins [BR:
ctig04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120306397 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_22
AAA_16
HTH_17
Motif
Other DBs
NCBI-GeneID:
120306397
NCBI-ProteinID:
XP_039195525
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MIAAQISRSLHHREYWKTVDSLNHMYIQYARIWIPDSELVWKSAELLKDYKPGDKVLHLR
LEDGKDIEYKLDAKSKDLPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYT
YCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIV
SGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFG
KYIEIGFDKRYRITGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKALRLGN
ADYFHYTKQGGSPIIDGIDDAKEMLNTRRACTLLGIVDSRQMGIFQILAAILHLGNVTFT
SRDADSCTIPPKHEPLRIFCELMGVEYEQMAHWLCHRKLATATETYIKPISKLQAINARD
ALAKHIYANLFIWIVEHVNKALQSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKL
QQQFNMHVFKLEQEEYMREQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDN
SWAQKLYNTHLNKTALFEKPRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVYEEQINVLK
SSKFKMLPELFQEEKAISPASATPSGRIPLSRAAVKPAKSKMAQASKEHKKTVGHQFRNS
LHLLMETLNATTPHYVRCIKPNDFKFPFMFDEKRTVQQLRACGVLETIRISAAGFPSRWT
YQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIR
ADKLRAACIRIQKTIRGWLMRKKYLRMRKAAITIQRYVRGYQARCLAMFLRRTKAAIIIQ
KCQRMYATRKRYRRIRATTVTLQSYLRGYLARKKYHKMLWEHKATIIQKHVRGWLARLHY
HRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVEHYKKLNVGMENKIMQLQRKIDDQTRD
SKSLVEKLTILEAAYASETEKLRNDIERLRMSEEEAKNATNRLMSLQEEISRLRKELSQI
QTEKKAIEEKAGLYKQEMDQLVLELKEQNTLLKKEKDDLNSHIQNQAKEITEVMEKKYFE
ETKQLDLDLNNERQRYQNLLQEFSRLEERYDDLKDEMKLMETVSKPGHKRTDSTHSSNES
EYTYTSEIAEAEWEPMGTEEPSEKKAPLDMSLFLKLQKRVKELELEKQSLQDELEKKEDQ
VLRAKAKEEERPQMRGVELEYESLKRQELESENKKLKNELNELRKALIEKSAPDVTMPGA
PAYRVLLDQMTSVSEELEVRKEEVLILRSQLMSQKEAVQPKDDKNTMTDSTILLEDVQKM
KDKGEIAQAYIGLKETNRLLESQLQAQKRSHENDLEALRGEIQSLKEENNRQQQLLAQNL
QLPPEARIEASLQHEITRLTNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIDELEVGHME
NISPGQIIDEPIHPVNIPRKEKDFQGMLEYKKEDEPKLVKNLILDLKPRGVAVNLIPGLP
AYILFMCIRHADYLNDDQKVRSLLTSTINGIKKILKKRGDDFETVSFWLSNTCRFLHCLK
QYSGEEGFMKHNTPRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGM
LEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSIIRQLNTFHSIMCQHGMDPELIKQVV
KQMFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTSGAKETLEPLIQ
AAQLLQVKKKTDEDAGAICSMCHALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQLRMR
DRKDSPQLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLGFISQV
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgcccagattagtagaagtttgcatcaccgcgaatactggaaaacagtggat
agcttgaaccatatgtacattcaatatgcaaggatttggataccggattcagaattagtg
tggaagtcggcagaacttttgaaagattataaaccaggagacaaagtcctacatctgcga
cttgaggatggcaaggatattgaatataaacttgatgctaagtctaaggacctaccaccc
ttgcgaaatccagacatacttgtgggtgaaaatgacctgacagcactcagctaccttcat
gaacctgctgttctccacaatctcaaagttcggtttatagactcaaaactcatttataca
tattgtggtatagttttagttgccataaatccttacgagcagctgcctatctatggcgaa
gacatcatcaatgcctacagtggccaaaatatgggggacatggacccccacatctttgct
gtggctgaggaggcatacaaacagatggccagagatgaacgcaaccagtccatcatcgtc
agcggggaatcgggagctgggaaaaccgtgtctgccaaatacgccatgagatactttgcc
acggtgagcggctcggcaagtgaagctaacgttgaagagaaagtattagcttccaatcct
ataatggagtctattggcaatgccaaaaccacaagaaacgacaacagcagtcgctttggg
aaatacattgaaatcggttttgacaaacggtatcgaatcacaggggctaacatgaggact
tacctcctagaaaaatcaagagtggtgttccaggcagaagaagagagaaattaccatatc
ttctatcagctttgtgcttctgcagcattacctgaatttaaagcgttgcgattggggaat
gcagactattttcactatacaaaacaagggggcagcccaataattgacggaattgatgac
gctaaggaaatgctcaacactcggcgggcttgcactcttttaggcattgttgattcccgt
cagatgggaattttccaaatccttgctgccattcttcacttgggcaacgtgacattcaca
tctcgagacgccgatagctgcacaatccctcctaaacacgaacccctcaggatcttctgt
gaactcatgggagtggaatatgagcagatggcgcattggctttgccacagaaagctcgct
actgccaccgagacctacatcaagccaatttccaagctgcaggctatcaatgctagggat
gcgcttgcaaaacatatctacgccaacctttttatctggattgtagaacatgtgaacaaa
gctttgcagtccactgtgaaacagcattctttcattggcgtgttggacatttatgggttt
gaaacatttgagatcaacagttttgaacaattctgtataaattacgccaatgagaaactg
cagcagcagttcaatatgcatgtctttaagttggagcaagaagaatacatgagggaacaa
attccttggaccttgattgatttctatgacaatcagccctgcattaacctcatcgaggcc
aaaatgggaattctggatttgctggatgaggaatgcaagatgcctaaaggctcagacaat
agttgggcgcagaaattatacaatactcacttgaataagacggcactgtttgagaaacct
cgattgtccaacaaagcttttattattcaacactttgcagataaggtggagtaccagtgc
gaagggtttttggaaaaaaacaaggatactgtctatgaagaacagatcaatgttctcaaa
tcaagtaagtttaagatgctgcctgagctgtttcaagaggagaaggcaatcagccccgcc
tcagccactccatcgggtcgtatcccattgtctcgagcagctgtaaaaccagccaagtcc
aaaatggcccaagcaagcaaggaacataagaaaactgtggggcatcagttcagaaattct
ctgcatctcttgatggagacccttaatgccacaactccacattacgtgcggtgtattaaa
ccaaacgacttcaagtttccatttatgtttgatgaaaagcggactgtacaacagctcaga
gcctgtggcgtgctggagacaatccggatcagtgcagctggtttcccttcgaggtggacc
tatcaagaattcttcagccgctatcgtgtcctgatgaagcagaaagatgtcctcagtgac
aggaaacagacatgcaaaaatgtcttggaaaagctgattctggacaaggataagtaccag
tttgggaagacaaaaatatttttccgggctggtcaagttgcttatttggaaaaaataagg
gccgataaactaagagcagcttgcatccgtatccaaaaaactatcaggggctggttgatg
cgaaagaagtacctgcgcatgaggaaggcagccatcaccattcagagatacgtccgtgga
taccaggcacgatgccttgcaatgttcttacgaagaaccaaagctgccatcattatccag
aaatgccagcgcatgtatgctacccgcaaacggtatcgacgcatccgagctaccaccgtt
actctccagtcgtacctgcgaggctaccttgccaggaagaagtatcacaagatgctttgg
gagcacaaagccaccattatccaaaaacatgtgcgtggctggctggctcgcttgcactac
cacaggactttgaaggcaattgtctacctgcaatgctgctaccggcgcatgatggccaaa
agggagctgaagaagctgaagatagaagctcgctcggtcgaacactacaagaaactcaac
gttggcatggagaacaagattatgcagctccagcgtaaaatcgatgaccagacacgagat
tccaaatccctggttgagaagctaaccatcttagaggcggcctatgcttccgagacggag
aagctgcggaatgacatcgaaaggcttcggatgagtgaggaagaggccaagaacgccacc
aaccgcctcatgagtcttcaagaggagatcagcaggctgaggaaggagctgagccagatc
cagaccgaaaagaaagccatcgaagaaaaggcgggtctctataaacaagaaatggaccag
ttggtgcttgaactaaaagagcaaaacacacttcttaaaaaggaaaaagatgacctgaat
agtcacatccaaaaccaggccaaagaaattacagaggtcatggagaaaaagtactttgag
gagacgaaacaactggacctagatctgaacaatgaaaggcagagataccagaacctgctc
caagaattcagccggttagaggagcgatacgatgacctcaaggatgagatgaagctgatg
gagactgtttccaagccagggcacaagagaacggattccacccatagtagcaatgaatca
gaatatacttacacctctgagatagctgaggctgaatgggaaccaatgggaactgaggaa
ccgagtgagaaaaaggcacctttggacatgtctctcttcctcaagctacaaaaacgagtg
aaggagctggagctagaaaagcagtccctgcaggatgagctagagaagaaggaggaccaa
gttctccgggccaaggccaaggaggaagaaaggcctcagatgagaggagtagagctggaa
tacgaatcgcttaagcgtcaagagctcgaatcagagaataagaaactgaagaacgaattg
aacgagttgagaaaggctctgatagaaaagagtgctccagatgtcaccatgcctggtgct
ccagcatacagggtccttttggaccagatgacatctgtcagtgaagagttggaggtccgc
aaggaggaagttctcatcctgaggtctcagctgatgagccagaaggaggcagtgcagccc
aaggatgataagaacaccatgacggattctacaattcttctggaagacgttcagaagatg
aaagacaaaggggagatcgctcaagcttatattggactgaaagagacaaacaggcttctg
gaatctcagctgcaggctcagaaaagaagccacgagaatgacctggaggcccttcgcgga
gagatccagagtctaaaggaggagaataaccgccagcagcagttgctggcccagaacctc
cagctgcccccagaagcccggatagaggccagtctgcagcacgaaatcacccgcctgacc
aatgagaacttggatttaatggaacagctggagaaacaggacaagacagttcggaagctg
aaaaagcagctgaaggttttcgccaaaaaaattgatgagcttgaagtgggccacatggag
aacatttcacctggacaaatcattgatgagccgatacatcctgtgaatatcccaaggaaa
gaaaaagacttccaaggcatgttagaatacaagaaagaagatgaacccaaacttgttaag
aatcttattttagatctgaagcctcggggagtggctgtgaatctcatcccagggctgcca
gcttacattttgttcatgtgcatccgccatgccgactacctgaacgatgatcagaaagtg
aggtccttgctgacttctacgattaacggcatcaaaaaaattttgaagaaaagaggcgat
gactttgaaacggtctctttctggctgtccaatacgtgccgatttttgcactgtttgaag
caatatagcggtgaagaagggtttatgaagcataacacacctcgtcagaatgaacattgc
ctgactaatttcgaccttgctgagtacagacaagtgctaagtgacctggccatccagatt
taccagcagctggttcgagttctggagaatattttgcaaccaatgattgtttcaggaatg
ctggagcatgaaaccatccaaggagtgtccggggtgaaacccaccggcctacgcaagaga
acctctagcattgccgacgaagggacctacaccttggactccatcatccgtcagctgaac
accttccactccatcatgtgccagcacggcatggatcctgagctgatcaagcaggtggtc
aagcagatgttctacatcattggggccgtgaccctcaataaccttctcctgcgaaaagac
atgtgctcctggagcaaaggaatgcagattaggtacaatgtaagccagctggaagaatgg
cttcgtgacaaaaacctcatgaccagcggcgccaaggagaccctggagccgttgatccag
gccgctcagctgctgcaggtgaaaaagaagaccgatgaggacgcgggggccatctgctcc
atgtgccacgcgttgactaccgcccagattgtgaaagtattgaacttatatactcccgtt
aatgagtttgaagaaagagtgtctgtgtcttttatccggacaatacagctgcgtatgcga
gacaggaaggacagtccccagctcttaatggatgctaagcatattttccctgttactttc
ccattcaacccgtcctctctcgcactagaaacgatccagattccagcaagtttgggtcta
ggattcatctctcaggtctga
DBGET
integrated database retrieval system
