Crotalus tigris (Tiger rattlesnake): 120306398
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Entry
120306398 CDS
T08476
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120306398 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120306398 (MYO5C)
04131 Membrane trafficking [BR:
ctig04131
]
120306398 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120306398 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctig04812
]
120306398 (MYO5C)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120306398 (MYO5C)
mRNA cycle factors
P-body specific factors
120306398 (MYO5C)
Membrane trafficking [BR:
ctig04131
]
Others
Actin-binding proteins
Myosins
120306398 (MYO5C)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120306398 (MYO5C)
Cytoskeleton proteins [BR:
ctig04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120306398 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Sec2p
Csm1_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
120306398
NCBI-ProteinID:
XP_039195529
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MALAELYTQYNRVWIPDAEEVWQSAEITANYRSGDHILHLQLEDSTELNYPVDPSALPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFVESKLIYTYSGIILVAMNPYKELPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNDRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNTKVEDKVLACNPITEAIGNAKTTRNDNSSRFGKYMEISFDKKYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQRREFKHLQLASAEEFNYTNMGRNIAIEGVNDL
ADMKETQKTFSLLGLKEDFQMDVFKILSAILHLGNVQIYAAGDEKSFINADDKHLTIFSK
LLGVASDKIAQWLCHRKIITTSETVVKPMTKLQAVNARDALAKKIYSHLFDFIVEQINKA
LQFSGKQHTFIGVLDIYGFETFDLNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKENI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNFINKNPLFEKPR
MSNTSFIIQHFADKVEYKSEGFLEKNRDTVYEVLIDILRNSKFQLFANFFRDVSVPLSPF
NSAIKVKSAKTVIVSPNKQFRATVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLAFE
FDSKRVVQQLRACGVLETIRISSQSYPSRWTYLEFYSRYSILMSQSELSLTDKKQICKMV
LQRLIQDPSQYQFGRTKIFFRAGQVAYLEKVRSDRLRQACIMVQKNIRGWLQRKKFLRIR
QAAVIIQQYFRGQRTVRKAITARALKETWAAIVIQKYSRGYLVRRLCQLIRVAALTIQAF
ARGFLARKKYRKMLEEQKALILQKYARAWLARRRFQSIRRFVLNIQLSYRVQRLQKKLEE
QNKENHSLLEKLATLASNHSSDIETIQKLQRDLEKSAGQRKLSEETEKKNRMGYEQRVLK
LENHNLGLQEEKKKLEKELQTKTEEMKDKLDNLTKQLFSDVQREERQRIILEKNFQSQKQ
DYEEKIKSLNAEIMLLKEENAQLQNLIQGLQQAQEGLKTEIEELSNQIKTIPELRKEIDF
LQIQKLDAEKQLQYQKREMREKMSEITKQLLESYDFADVRSRLSPEDLQHLNEDGELWFA
YEGLKKATRVLEKHFQDQKENYEREIEDLNAKINHLSQESTHLQKLFREENNTKECIRLQ
VARLTSENMMMPDLKLRVAELQKQKLDLEHRLQDELVKKSEKMEDWTDQNTDEEFSQKQA
LPLRKKMFPKGKTFPEFERDTDHLEKQPERANGTGSKIWQDVVYLTMENTDLEEELDKKD
RLIKKLQDQIRTLKKSIETGNEESPSSVLREYMGMLQYRKEDEAKIVQNLILDLKPRGVV
VNMIPGLPALILFMCVRYADYLNDDSMLKSFMNMAISGIKQVIKEHAEDFEMLSFWLSNT
CHFLNCLKQYSGEEEFMKHNTPEQNKNNLIHFDLSEYRQVLSDLAIRIYHQFIGVMETSI
QPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYTTLCQNGLD
PELLKQAVRQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKNLQSSSAK
ETLEPLSQAAWLLQVKKITEEDAKEISEHCATLSAMQIVKILNSYTPIDDFEKRIAPSFV
RKVQGMLNNRQNSTQLMLDTKFLFQVTFPFTPSSHPLEMIEIPSSFRLGFLTRI
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtataacagagtttggatccctgatgctgaagag
gtttggcagtcggcggaaattacagctaattataggtctggagaccatattcttcacctc
cagctggaagacagcacagagctgaattaccccgtggatcctagtgctttgccaccttta
cgaaatccggatattcttgttggggaaaatgatctcacagcccttagttatctccacgaa
ccggccgttttgcacaaccttagagttcgctttgtggagtccaagctgatctacacctat
agcgggataattttggtcgccatgaacccttacaaagagctgccaatttacggggatgcc
atcattcatgcttacagtggtcaaaatatgggagacatggatccccatatctttgcggtg
gcggaagaggcttacaagcaaatggcgaggaacgaccgaaatcaatcgattattgtaagc
ggagaatcgggagcaggcaaaacagtttctgctcgatatgccatgagatattttgcgaca
gtcagcaaatctagcagcaatactaaagtcgaggataaagtgttggcgtgcaatccgata
acagaggcgattggaaatgctaaaactactcgcaacgacaacagcagtcgctttggaaaa
tacatggaaatcagtttcgataagaagtaccagatcattggggcaaatatgagaacttac
ctgcttgagaaatccagagttgtttttcagtcagaaaatgaaagaaattaccacatattc
tatcagctgtgtgcatcggctcagagacgagaatttaagcatcttcagctagcaagtgct
gaagaatttaattataccaacatgggtaggaacatcgccattgaaggagtgaatgacctg
gccgatatgaaagaaactcaaaaaacgttcagcctgctaggccttaaggaagatttccag
atggatgtttttaaaatactctccgctattcttcatttaggcaatgtgcagatctatgct
gctggcgatgaaaagtcttttattaatgcggacgacaaacatctcactatattttctaaa
ctcctgggagtcgcaagtgataaaatagctcagtggctttgtcacaggaaaattattact
acctctgaaaccgtagtaaagccaatgacgaaactccaagctgtaaacgcccgggatgct
ttggcaaagaaaatttattctcatctttttgatttcattgtggaacaaattaacaaggcc
ttgcagttttcaggcaaacaacataccttcattggtgttctggacatttatggattcgaa
acttttgatttgaatagctttgaacaattttgcatcaactatgccaatgaaaaattacag
caacaatttaacctgcatgtctttaaactagaacaagaagaatacatgaaagaaaatatc
ccgtggacgttaattgatttttatgacaatcaacctgtcatcgatctgattgaagctaaa
atgggcattctagaacttttagacgaagagtgcctgctacctcaaggaacggatgaaaat
tggctccaaaagctatataataattttataaacaagaaccctctctttgaaaagccaaga
atgtcaaatacttcttttatcatccagcactttgcagacaaggtagaatataaaagtgaa
ggatttctggaaaaaaaccgggacactgtatatgaagtactgattgacatcttgagaaac
agtaagtttcagctgtttgcaaacttcttccgggatgtttcagtccctctttccccgttc
aactctgcaatcaaagttaagtctgcaaaaacagtgattgtgtcacctaacaaacagttc
cgtgcaactgttggaagtaagtttcgcagttccttatacttattaatggagactcttaat
gccaccacaccacattatgtccggtgcataaagccaaatgatgaaaaattagcatttgaa
tttgactccaaaagggtggtccagcagttacgagcatgtggggtgttagaaaccattcgt
attagctctcagagttatccatcaagatggacgtatcttgagttctacagtcgttacagc
attctcatgtctcaaagtgaactttctctaacggacaagaaacaaatttgcaagatggtt
ttgcagcggctaatccaggatccaagtcaatatcagtttggcaggacaaagatttttttc
agagcgggacaggtcgcctacctggaaaaagtgcgttcagatcggctgaggcaagcatgc
attatggttcagaagaacatccgaggctggcttcaaaggaagaaattcctgcgcatcaga
caagctgcagtcatcatacaacaatatttccggggacagcggaccgtacggaaagctata
actgccagggccctgaaggaaacctgggctgccatagttatccagaaatacagccgagga
tatttagtgcgtagactttgccagctcatccgtgtggctgctttgacgatccaggccttt
gcacgaggattcctagcaaggaagaaatacaggaagatgcttgaagaacagaaagcttta
atcctccagaagtacgcccgggcatggcttgcaaggcgccgattccagagtattcgccgt
ttcgtcctgaacatccaactttcgtacagagtccagcggctgcagaaaaaactggaagag
cagaataaggaaaaccatagtttgctggaaaagctggccacccttgcttcaaatcactcc
agtgatatagagaccattcaaaaacttcaacgggaccttgaaaagtcagctgggcaaaga
aaactatctgaagaaactgagaagaagaacaggatgggctatgaacagagggttttgaaa
cttgaaaaccacaacttggggctacaggaagagaagaagaagctggaaaaagaacttcaa
acgaaaacagaggaaatgaaagataaactggataatttgacgaagcagttattctctgat
gttcaaagagaggaaaggcaacgaataatattggagaaaaatttccagagccaaaaacaa
gattatgaagaaaagataaaatccctcaatgcagaaataatgcttctcaaagaggaaaac
gctcagctgcaaaatctgattcaaggactgcaacaagctcaagaaggcttaaaaacagaa
atagaggaactttcaaaccaaattaagacaatccctgaattgcgaaaagaaatcgacttt
cttcagattcagaaactggatgcagagaagcaactacaataccagaagcgtgaaatgaga
gagaagatgtccgagattaccaagcaactcttggaaagctatgactttgcggacgtgagg
agcagattgtctccggaagacttgcaacatctgaatgaagatggtgaactctggtttgcc
tatgaaggcttgaaaaaagccacacgagttttggaaaaacatttccaggatcagaaagag
aactatgaaagagagatagaagatctgaatgctaaaataaaccatcttagtcaagagagc
acccacctacagaaactcttccgggaggaaaacaacactaaggaatgtatccgtctccaa
gttgccaggctaacctccgagaacatgatgatgcccgaccttaagctgcgagttgctgaa
cttcagaagcagaagctggatcttgagcatcgtcttcaagatgaacttgtcaagaaaagt
gagaaaatggaagactggacagatcaaaacacagatgaggagttctcacaaaaacaagcc
ctgccgcttcgaaaaaaaatgttccctaaaggaaagacatttccagagtttgagagggac
actgaccatctggagaagcagcctgaaagagcaaatgggactggaagcaaaatatggcag
gacgtcgtgtatctcaccatggaaaatacagatctagaagaagagctggataagaaagac
cggttgataaagaagcttcaggatcagatcagaacccttaaaaaatccattgagacaggc
aatgaagaatctccatcttcggtgctaagagaatacatgggaatgttgcagtacagaaag
gaggacgaagcaaaaatcgttcaaaacctgatccttgatctgaaaccccgtggagtagta
gttaacatgattcctggcctgccagctcttatcctcttcatgtgcgtaagatacgcggat
tatttgaatgacgacagtatgctgaagtcgtttatgaacatggcaatcagcggcatcaaa
caagtcatcaaggaacatgccgaagactttgagatgttatccttctggctttccaataca
tgccattttcttaactgtctgaaacagtacagtggggaagaggaattcatgaagcacaac
acgccggaacaaaataagaacaatctgatccactttgatctgtctgaatataggcaggtg
cttagtgatctggccattcgtatatatcatcagtttatcggtgtaatggagaccagtatt
cagccaatgatagtgccaggaatgctggaatatgaaagtcttcaggggatttcgggctta
aaaccaactggatttcggaaacgttcttctagcatcgatgacacggatgcttacaccatg
acctccatcttgcaacagctcagctatttttataccaccctgtgtcagaacggcttagac
ccggagcttttaaagcaggccgtgaggcagcttttctttctgatcggagcagttaccctg
aacagtctgtttcttcggaaagacatgtgctcatgtaggaaaggaatgcaaatcaggtgc
aacatcagctacctggaagaatggctgaaggagaagaacctgcagagcagttctgcaaag
gagacattggaacctctttcgcaagccgcctggcttcttcaggtcaaaaagatcacagag
gaggatgccaaagagatctcggagcattgcgcgaccctctcggctatgcagatagtaaaa
atcctcaattcctacactcccattgatgattttgaaaaaaggatagctccatccttcgtt
cgtaaagtccaaggaatgctgaacaataggcagaattccacacaactgatgcttgatacc
aaattcctctttcaagtgacatttccttttacaccttcatcacatccgctggaaatgata
gaaatacccagcagtttcagacttggcttcctcactagaatatag
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integrated database retrieval system
