Crotalus tigris (Tiger rattlesnake): 120306423
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Entry
120306423 CDS
T08476
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04520
Adherens junction
ctig04810
Regulation of actin cytoskeleton
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120306423 (VCL)
04520 Adherens junction
120306423 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120306423 (VCL)
04810 Regulation of actin cytoskeleton
120306423 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctig04812
]
120306423 (VCL)
04147 Exosome [BR:
ctig04147
]
120306423 (VCL)
Cytoskeleton proteins [BR:
ctig04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120306423 (VCL)
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120306423 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
VMAP-M0
Fungal_trans_2
PSI_PsaF
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
120306423
NCBI-ProteinID:
XP_039195575
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKDLLPVLISAMKIFVTTKNSQNQGIEEALKNRKFTVEKMSTE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMKQAKGWLRDPTAPAGDAGEQAI
RQILDEAGNVGELCAGKERREILGTCKMLGQLTDQLADLRARGQGATPLAMQKAQQIAQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQSWLADPNGGSEGEEHIRGIMTEARKIA
ELCEDPKERDDILRSLGEISALTAKLSDLRKHGKGDSPEARALAKQIATSLQNLQSKTNK
AVANSRPVKPAVHLEGKIEQAQRWIDNPTVDDRGVGQASLRGLVAEGRRLANIMMGPYRQ
DLLAKCDRVEQLAAQLADLAARGEGDTPQARVVALQLQEALKDLKSRMQEAMTQEVSEVF
SDTTTPIKLLAVAATAPPDASNREEVFEERAANFENHAARLGATAEKAAAVGTANKSTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANVQPQMLVAGATSIARRANRILLVAKKEVENSEDPKF
REAIKAASDDLSKTISPMVMDAKAVAGNISDPGLQKNFLDSGYRILGAVARVRDAFQPQE
PDFPPPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLNQP
MMMAARQLHDEARKWSSKPEVAGGGKEAPAEVGLGVAREEAEEEEEEEAGVEFTLPSDME
DDYEPELLLMPTNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVR
GASGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL
STVKATMLGRTSISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRW
VRKTPWYQ
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttccacacgcgcacgatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggcgaggtggacggcaaggccatcccggacctc
accgccccggtggccgccgtgcaagccgccgtcagcaacctggtccgggtgggaaaagaa
accgttcagacaactgaagaccagattttgaagagagatatgccaccagcattcatcaaa
gtggaaaatgcgtgcacgaagcttgtccaggcagctcagatgctccagacggatccttac
tcagtccctgctcgtgattacctgatcgatgggtcccgagggatcctctcagggacgtcg
gacttgcttctgacattcgatgaagccgaggtccgtaagatcatccgtgtctgcaaaggg
attctggaatacctcaccgtggctgaagtggtggagaccatggaagacttggtgacctac
acgaagaacctgggaccaggaatgacaaagatggccaagatgattgacgaacgacagcaa
gagctgactcaccaggagcaccgagtcatgctggtcaactccatgaacaccgtgaaggac
ctcctcccagttctcatttcagcaatgaagatttttgtaacaactaagaactctcagaac
cagggaattgaggaagccttgaaaaaccgcaaatttacagtggagaagatgagtacagaa
ataaatgaaataatccgtgtattgcagctgacttcctgggatgaagatgcttgggccagc
aagaaggacacggaagccatgaagagggcactggctctaatcgattccaaaatgaagcag
gccaagggctggctcagggaccccactgctccagcaggggacgctggcgaacaagccata
agacagatcctggatgaagcaggaaatgttggagaattgtgcgcaggtaaagaacgccgg
gagattctaggaacctgcaaaatgttgggccagctgacggatcaactagctgatcttcgg
gccagggggcaaggggccacccctctcgcaatgcagaaagctcagcagatcgctcaaggg
ctggacttgctgacagccaaagtggaaaacgcggctcgcaagctggaggccatgaccaac
tccaagcaggccattgccaagaagattgacgctgcccagagctggctggcagatcctaac
gggggcagcgaaggagaagaacacatccgaggaattatgacggaagccaggaaaattgca
gaactctgcgaagaccccaaagagagagatgacattttgcgctccttgggagaaatctct
gctttgacagctaaattgtccgaccttcgaaaacatgggaaaggcgattcgccagaagcc
cgggcattagccaagcaaatagcgacatcgcttcagaatttgcagtccaaaaccaacaag
gctgttgcaaacagcagacccgtcaagccagctgttcatctggaaggcaagattgagcaa
gctcaaagatggatagacaaccctacagttgatgatcggggtgtaggccaggcttccctc
cggggactggtggccgaagggcgccgccttgccaacatcatgatggggccctaccgccag
gacttgcttgccaagtgtgaccgggtggagcagctggctgcccagttagctgatttggcc
gcaagaggtgaaggcgacaccccacaggccagagtcgtggctcttcagctgcaggaggcg
ctgaaggatcttaaatcaaggatgcaagaagctatgacccaggaagtgtcggaagtgttt
agcgataccacaaccccaatcaagctgttggcagtagcagccactgctcctccagatgcg
tccaacagagaggaggtctttgaggaaagggcagccaactttgagaatcacgcggcgagg
ctgggggccacagcggagaaagcggcggctgttgggacagccaacaaaagtaccgtggag
ggcatccaggcgactgtgaagtcagcgagggaactgacgcctcaggtagtgtctgccgct
cgcatcctgttgaggaatcctggcaatcaggctgcttatgaacattttgagaccatgaag
aaccaatggatcgataatgtggaaaaaatgacaggcttagtggatgaagccattgacacc
aaatccctgctggatgcctctgaggaagccattaagaaagacctggacaaatgcaaggtg
gccatggccaacgttcagccacagatgctggtagccggggccaccagcattgcccggcga
gcgaaccgtatcctgctggtggcaaagaaagaggtggaaaactcagaagatcctaaattc
cgtgaagctattaaagctgcctcggatgacttgagcaagaccatttcaccaatggtgatg
gatgcaaaagccgtggcaggcaacatttctgacccgggtttgcagaagaactttcttgat
tctggatacaggattctaggagcggtggccagagtccgcgatgctttccagccccaggag
cccgatttccccccccctcctcctcctcctgacctcgagcagctccacctcaccgatgaa
cttgctcccccaaagccccctctgcccgaaggggaggttcctcctcctcgccccccaccc
cccgaagagaaggacgaagagttcccggagcagaaggccggcgaggtgcttaaccagccc
atgatgatggctgccaggcagctccacgatgaagccaggaaatggtccagcaagcctgaa
gtggctggtggggggaaggaagcccccgccgaggttggcctaggcgtagctcgggaggag
gcggaggaggaggaggaggaggaagcaggagttgaattcaccctcccctccgacatggaa
gatgattacgagcctgagctgctgctcatgccgaccaaccagcctgttaaccagcccatt
ctggccgctgctcagtctctgcaccgggaagctaccaagtggtccagtaagggcaacgac
atcattgcggcggccaagcgcatggccttgctgatggccgagatgtcccgcctggtgagg
ggcgccagtgggaacaagcgagcgctcatccagtgtgcaaaagatatcgcaaaagcttcc
gacgaggtgacccgtctggctaaagaggtggccaaacagtgcacggacaagaggatccga
acaaaccttttgcaggtttgtgaacgaatcccaaccatcagcactcagctgaaaatcctg
tccaccgtcaaagcgaccatgttgggccggaccagcatcagcgacgaggagtctgaacag
gccacggagatgttggtccacaacgcccagaatctcatgcagtccgtcaaggaaaccgtc
cgggaggccgaagctgcatccattaagatccggacagatgctggattcactttgcgctgg
gtcaggaagaccccgtggtaccagtag
DBGET
integrated database retrieval system
