Crotalus tigris (Tiger rattlesnake): 120306587
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Entry
120306587 CDS
T08476
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120306587 (TRPM1)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120306587 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
120306587
NCBI-ProteinID:
XP_039196049
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MEGKGLGAKKGPGGKLSSSLRRTSSSFQSASLRGSMSGSQKGQKAWIEKTFFKRECSRVI
ANSKDATRCCCGQLLAQHIPVPVETANKDGEDPAKQLEAQPEKWSISKHTQALPTDAFGN
LEFQGGCHINKSMYIRVSYDTKPDLLLQLMVKDWQLELPKLLISVHGGLQNFELQPKLKQ
VFGKGLIKAAMTTGAWIFTGGVSTGIIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKE
DLLGKDVTKLYQTMSNPLSKLCVLNSSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQK
INTRLGQGVPVVGLVVEGGPNVISIVLEYLREEPPLPVVICDGSGRASDIISFAHKYSEE
GGIINESFQDQLLVTIQKTFNYSRNQAHQLFVILMECMKKKELITVFRMGSEGQQDIEMS
ILTALLKGTNVSAPDQLSLALAWNRVDIARSQIFVFGHHWPPLGSLAPANGAPQEKEKKS
PVPQMKGGRGKGKGKKKGGKQKEEPEEELDPRKLELLNWVNALEQAMLDALVLDRVDFVK
LLIENGVNMQRFLTIPRLEELYNTRLGPPNTLHMIVRDVKKGNLPPDYHISLIDIGLVLE
YLMGGAYRCNYTRKSFRTLYNNLFGPKRPKALKLLGMEDDDPPTKGKKKKKKKKKEEHID
IDVDDPEVSRFQYPFHELMVWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESM
ESELVDDISQDMDNNSKDFGQLAVELLDQSYKHDEQVAMKLLTYQLKNWSNSTCLKLAVA
AKHRDFIAHTCSQMLLTDMWMGRLHMRKNPGLQVIMGILLPPTILFLEFRTNDEYQTSSE
KEVGKEKEEDNADANADAASRRGDEEGGKTKQKSLPIGTKICEFYNAPIVKFWFYTISYL
GYLLLFNYIILVRMERWPSLQEWIVISYILTLALEKVREILMSEPGKLSQKVKVWLQEYW
NITDLVAISVFLIGAILRLQNQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMI
GKMMIDMLYFVVIMLVVLMSFGVARQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQI
DRKSRIHIYAMEINPPCGDNLYDEDGKRLPPCIPGAWLTPAIMACYLLVANILLVNLLIA
VFNNTFFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIIFSHLYIIIVRLCCRWKKHKE
GDQDERDRGLKLFLSDEELKKLYEFEEQCVEEYFQEKEDEEQSSNDERIRVTSERVENMS
MRLEEVNEREHFMKASLQTVDLRLSQLEDTSGRMATALEKLAGIDTAELTLPRSRASSEC
DAAYLLRQSSVNSSDSYSIYRYQTDELLYDTLPMPMSPALALHKADSKMQLAPERQGSLR
SALGPNAVTSVESSKNTLEVVQAVPRSYSSSVDQQDQSPSYESIPQSLTQTESIGNSQSG
IQPALRLPLGKTRLGATISYPLDKPRARRYYPAETGNASHASIMKSKSFIFAQGRDLVAG
FNNWTLVDQEYRTITNQVCPSVVQQWTAEWKYELQQKMDDDPPPEYPGIVPQLENPIEQK
YLLANPEETSEMGKVEGLSPSPVSSPLIQKRTTCNRDSVKLGRTCRNPPGRSRSLHSRSQ
RTKSIKERLNRPGHARSISSLMVPSGSPMEELKTNQEKPSTETTC
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaaaggtttgggagccaagaaggggccaggagggaagcttagcagctccctc
cgaaggacgagcagttccttccaaagcgcttctctaaggggttccatgtctggatcccag
aagggtcaaaaagcatggatagagaaaacctttttcaagagagaatgcagccgcgtaatt
gccaacagcaaagatgctaccaggtgctgctgtggccaactccttgctcaacacatcccc
gttccggtcgaaactgcaaacaaggatggagaagacccagcgaagcagttagaggctcag
ccagaaaaatggtccatcagtaaacacacccaagcccttcccaccgatgcctttggaaat
ctcgagttccaaggtggatgccatatcaataagtccatgtacatccgagtgtcctatgat
accaagccagacttgctgctccaactcatggtgaaggactggcaactagaactccccaag
ctcttaatatccgtccacggggggctccagaactttgagctgcagcccaaacttaagcaa
gtgtttgggaagggcctcatcaaggctgccatgaccactggggcttggattttcactgga
ggagtcagcacaggaatcattcgccatgttggagatgccctgaaagatcattcctccaag
tccagaggacgcatttgtgccattggcattgccccatggggcattgtggaaaacaaggaa
gatctacttgggaaagatgtgacgaagctttatcagacgatgtcaaatccgcttagcaaa
ctttgtgtgctgaacagctcccatacgcacttcatcctcgccgacaatggcaccctgggc
aaatatggggcagaggtgaaactgaggcgccaactggaaaagcacatttctctgcagaaa
ataaacacccgcctggggcaaggagtccctgtggtaggattggtagttgaaggtggcccc
aatgtgatctcaattgttttggaatatctgcgtgaagagcccccacttccggtggtcatc
tgtgatggcagtggacgagcatcggacatcatatcttttgcacacaagtattcagaagaa
ggcggcataataaatgaatctttccaggaccagctgctggtcaccattcagaaaacgttc
aactacagtcggaatcaagcccaccagctctttgtgattctcatggaatgtatgaagaag
aaagaactcatcacggtcttccgaatgggatctgaagggcaacaagatattgagatgtcc
atcctaacggctttacttaaaggcaccaacgtctcagcacccgatcagctgagcttagct
ctggcttggaaccgggtcgatattgcgcgcagccagatcttcgtctttgggcaccattgg
ccgcccctgggaagtctggcccccgcaaatggggcacctcaggaaaaggagaagaaatct
cccgtccctcaaatgaaaggaggacgagggaaagggaaaggaaaaaagaaaggtggaaaa
cagaaagaggaacccgaagaagagctggatccaaggaagcttgaactgttaaactgggta
aatgccctggagcaagcaatgttggatgcccttgtcttggatcgggtggactttgtaaag
cttttgattgagaacggagtcaacatgcagagattcctcaccatcccacgtctggaagag
ctctacaacactagacttggcccaccaaacactttgcacatgattgtgagagacgtgaaa
aaaggaaatctacccccggattatcatatcagcctcatcgacattggcctggtgctagaa
tatctcatgggtggggcatatcgctgcaactatacacggaaaagtttccggaccctctac
aacaatctctttggaccaaaacggcctaaagctctgaagcttctaggcatggaggatgat
gaccctcccaccaaagggaagaagaagaaaaagaaaaagaagaaggaagaacacattgac
atcgatgttgatgacccagaagtcagccgtttccagtatccattccacgagctcatggtt
tgggcggtgttgatgaagagacaaaaaatggccctctttctgtggcagcgtggagaagaa
gccatggccaaagctctggtggcctgtaaactctacaaggccatggcccacgagtctatg
gagagtgagcttgtggatgacatatcccaggatatggacaacaactccaaggactttggc
cagttggctgtggagctactggatcagtcctacaagcatgatgagcaggtggccatgaaa
ctcttgacctatcagttgaagaactggagcaactctacttgcctgaaacttgcagtagca
gccaaacatcgggacttcattgcacacacttgcagccaaatgctgttgactgacatgtgg
atgggaaggttgcatatgcggaaaaacccaggtcttcaggtcatcatggggatcctcctc
cctcccaccatcctcttcctggaattccggaccaatgatgagtatcaaacatccagtgaa
aaagaagttggcaaagaaaaggaggaggataatgcagatgccaatgctgatgctgcctct
cgaagaggagatgaagagggtgggaagactaagcagaaaagtctccccatcggaactaag
atctgtgaattctataatgcaccaattgtgaagttctggttttacacaatatcctacctg
ggctacttattgctgttcaactacatcatcttggttcggatggaacggtggccctctctc
caggaatggatagtcatctcctacatcttgactttggctttagagaaagtcagggagatt
ctgatgtcagaaccagggaaactaagtcagaaggtcaaagtgtggctgcaagaatattgg
aacatcactgatttggtggccatttctgtgtttctgattggagctattcttcgcctgcaa
aaccagccttatatgggttacggaagagtgatctattgtgtggacatcattttctggtac
atccgtgtcctggacatctttggtgtgaacaaatacctgggaccctacgtcatgatgatt
gggaagatgatgattgacatgctatattttgtggtcatcatgctggtggtcctgatgagt
tttggggtggcccgccaagccatcctccaccccgatgaagagccctcctggagattggcc
cgtaacatcttctacatgccctactggatgatctatggagaggtctttgctgatcagata
gaccgtaagagcagaattcatatctatgccatggagattaatcctccttgtggggacaac
ctttacgatgaggacggcaagcgactccccccttgtatccctggggcttggctgactcct
gccatcatggcttgctacctgctagttgccaacatcctcctggtcaacctcttgattgct
gtctttaacaacactttctttgaagtgaaatccatctccaaccaagtctggaaattccag
cggtatcagctgatcatgactttccacgacaggcctgtcctcccaccacccatgatcatc
ttcagccacctttacatcatcatagttcgcctctgctgccgctggaagaagcacaaagaa
ggggaccaggatgaacgtgatcgtgggctgaagctgtttctaagcgatgaagagttgaag
aaactgtacgaatttgaggaacaatgtgtggaggaatattttcaagaaaaagaagatgaa
gagcagtcctccaatgatgaacgcattcgagttacttctgagagagttgaaaatatgtca
atgagattagaagaagtgaacgaaagagagcatttcatgaaagcttctcttcagacggtg
gatcttcggctttctcagctggaagacacctctggccgaatggcaactgctttggagaaa
ctggccggcattgacacggcagagctgactctcccacgctcccgggcctcctctgaatgc
gatgctgcttaccttttgaggcaaagcagtgtgaatagttcggacagctacagcatctat
cgttaccagacggatgagctgctctatgacacgttgcccatgccaatgtctccagcactg
gcattgcataaagccgattccaagatgcagctggccccagaacgtcaaggaagcctccgt
tctgccttgggcccaaatgcggtgacctctgtggaaagcagtaaaaacaccttagaggta
gttcaggctgtccctagatcatattccagttcagtagaccaacaggaccagtctccaagt
tatgagtccatacctcaatctcttacgcaaacagaaagtattgggaacagtcagtctgga
atccaaccagctctgcggttacctttagggaagaccagattgggagccaccatctcttac
cccttggacaagcccagagcaaggagatactacccagctgaaacaggcaacgcttctcat
gcctccataatgaagtcaaagagttttatttttgcacaaggtagagatttggttgccgga
tttaacaactggacactggtggaccaagaatataggactatcacgaaccaagtatgccct
tctgtggttcaacaatggactgctgaatggaagtatgaacttcagcaaaaaatggatgat
gacccccctcccgaatatccaggtattgtgcctcagctggagaatccaatagagcagaag
tatttgctggccaaccctgaagagactagtgagatgggcaaagttgaaggtctcagtccc
tcccctgtgtcctcccctctcatccagaagaggacaacttgcaaccgagactcggtgaag
ttaggaagaacttgtaggaatccaccggggcggtcaaggagtttacacagccgttctcag
agaaccaagtccattaaggagaggctaaataggccaggacatgccaggagcatcagtagc
ttgatggtaccttctggatctccaatggaggagttgaaaacaaatcaagaaaaaccttcc
acagaaaccacatgctaa
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integrated database retrieval system
