Crotalus tigris (Tiger rattlesnake): 120306671
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Entry
120306671 CDS
T08476
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120306671 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120306671 (MSH2)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120306671 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
MCU
HTH_RNase_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
120306671
NCBI-ProteinID:
XP_039196221
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAASIDACVSAPREGCWPEGSGAESGFIRAVLALPAKPNTTVRFFERGDYYTVHGEDAKL
VATEIFKTQAIIRILGSGTQKLESVALSKMNFESFLRNLLLIRQYRAEVYKNKAGNKSIK
ETEWYLAYKGSPGNLAQFEDVLFSNHDMSSSVGVVAIKLSSVDGQKVVGVGYVDSLARKL
EVSEFTDNDQFSNLEALLIQMGPKECLLPVGETAGDMEKLRQVVQRGGILITDRKKTEFS
TVDAVQDLNRLLQSGKKEHVSSAALPEMDKQVAISSLSVVIKYLELLNDESNFGQFELTT
FDLNQYMTLDHAAVRALNLFQNASEFAQGTHSLAGLLNKCRTPQGQRLVNQWIKQPLMDK
NKIEERLDMVGAFMEDGEVRQILQEDILRRFPDFSRIGKKFQKKATLQDCYKMYQAINQI
PNVIQALEKNNGNCNMLLDTVFTKPLKELNCDFSNFQKMIDETLDMNTVETHEYLVKPSI
DPNLAELRENMDKLERKMQGVLKTAAKELSLEAGKSIKLECNAQFGHFFRITYREEKVLR
NNLKYKILETQKNGVKFSNSALKEINEEYMKSRKEYEDMQDAVVKEIINVASGYKEPIQI
LNDVIAQLDAIVSFAHASNSAPIPYVRPVILEKGQGRIILKASRHPCIEVQDDVAFIPND
VTFEKDIQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTIVDCILARVGA
GDSQLKGVSTFMAEMLETSSILRTATEHSLIIIDELGRGTSTYDGFGLAWAISEYIASKM
KAFAMFATHFHELTALADQIPTVNNLHVTALTTKETLTMLYRVKKGACDQSFGIHVAELA
AFPKHVIECAKAKALELEDFQNIGMPQEEEEDEEPAAKRCHREKQEGEQIIQDFLSQVKA
MPLTEMSEEEIRTKLKELKDYVLRKNNSFVNGIISRINGAS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatagatgcttgtgtttctgctccacgagagggatgttggcctgaaggc
tcaggtgccgaaagcggctttattcgcgccgtcttggcgttgcctgccaaaccgaatact
actgtgaggttcttcgagcgcggcgactactacacggtgcatggcgaagatgcaaagctg
gtggcgacggagatcttcaaaacacaagcgatcattcggatcctgggctcaggaactcag
aaactcgagagtgttgcactcagcaagatgaattttgaatcttttttgcgaaatcttctt
cttattcgtcagtacagggctgaagtatataagaataaggcaggaaataaatccatcaaa
gagactgagtggtatttggcctacaagggttctccaggtaaccttgctcaatttgaggat
gttctttttagtaaccatgatatgtcctcttcagttggtgttgtagccattaaactgtcc
tcagttgatggacagaaagttgttggagtaggatatgtggattcactggcaagaaaacta
gaagtatctgaatttacagataatgatcagttttccaaccttgaagcactgttgatacaa
atggggccaaaggaatgtttgctgcctgttggggagactgctggagatatggagaaactg
aggcaggtggttcaaagaggaggaatcctgattacagataggaaaaagactgaattttca
acagtagatgctgttcaagatctcaaccgtttattgcaatcaggaaagaaggaacatgtg
tctagtgcagcattacctgaaatggataagcaggttgccatctcttctttgtctgtcgtg
attaaatacttagagctcttaaacgatgagtctaactttggacaatttgaacttaccacg
tttgaccttaatcagtatatgaccctggatcatgctgctgtcagagcccttaaccttttt
cagaatgcttcagaatttgcccaaggaacacattcattggctggattgttaaataaatgc
agaacacctcaaggacaaaggctagtgaaccagtggatcaaacaaccattgatggataag
aacaaaatagaagaaaggctagatatggtgggggccttcatggaagatggagaagtaaga
caaattcttcaagaagatatcctccgccgcttcccagacttcagtcgaataggaaaaaaa
tttcagaagaaagctactctgcaggactgttacaaaatgtatcaggcaattaatcagata
cctaatgtgatacaggcactggaaaaaaataatggaaactgcaatatgctactagatact
gtattcacaaaacctcttaaagagctaaactgtgatttctccaatttccaaaagatgatt
gatgaaactttggacatgaatacggtggaaacccatgaataccttgtgaaaccttccatt
gaccccaatcttgctgaattgagagaaaatatggataagctggaaagaaaaatgcagggt
gtgctgaaaaccgcagccaaggaactgagtttggaagctggcaagagtatcaaattagaa
tgcaatgcacagtttggacattttttcagaattacctacagagaagagaaggttctgcgg
aataatttgaaatataagattttggaaacccagaagaatggggtgaaattctctaacagt
gcattgaaagagattaatgaagagtatatgaagagcagaaaagaatatgaagatatgcaa
gatgctgtagttaaagaaataatcaatgttgcatcagggtataaagaacccattcagatt
ctcaatgatgtcattgcccagcttgatgccattgtcagttttgctcacgcatcaaattca
gcaccaataccatatgtgcgcccagttattctagaaaaagggcaaggaagaataatcttg
aaagcttccaggcacccttgcattgaagttcaagatgatgttgccttcatcccaaatgat
gttacttttgagaaggacatacagatgttccacatcattactgggccaaacatgggagga
aaatcaacttacatacgacagactggggtgatcgttcttatggcccaaattggctgtttt
gtgccatgtgactctgcagaagtgactattgttgattgcatcctggctcgagttggagct
ggagatagtcagctgaaaggggtatctaccttcatggccgaaatgctggaaacttcctcc
atccttaggactgcaactgaacattccttgataatcattgatgagttagggagaggaaca
tcaacatatgatggatttggattggcctgggcaatttctgaatatattgccagcaaaatg
aaagctttcgctatgtttgctactcattttcatgaactgacagcactggctgatcaaata
cccactgtaaataacttgcatgttacggcattaactacaaaggaaaccctgacaatgttg
taccgtgtgaaaaaaggggcctgtgaccagagctttggtatccatgtagcagaattagct
gcctttcccaaacacgtgattgagtgtgccaaggctaaagctctggaactggaggacttc
cagaacattggaatgcctcaggaggaggaggaggatgaggaaccagctgccaaaagatgc
cacagggagaagcaggagggggaacaaataattcaagatttcctttctcaagtgaaagca
atgccgttgacagaaatgtctgaagaagaaatccggaccaaactaaaggagttaaaagac
tacgttttaaggaaaaataattcttttgtaaatggaattatttcccgcatcaacggtgcc
tcatga
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