Crotalus tigris (Tiger rattlesnake): 120307105
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Entry
120307105 CDS
T08476
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120307105 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120307105 (NUP50)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120307105 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
120307105
NCBI-ProteinID:
XP_039197325
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MAKRVAEKELTDRNWDQEEETEEVGTFSVASEEVLKNRPIKKAKRRNVVTESEGGGAFKG
FKGFVLPSGTGVFSGFGNGPGTKSFGLLSNGGGSSSSITNSSSLSSLKTASETEPTFSSV
VSSVSANSVTLEKTSAHLEANGENPEPLSSGLAQSKACNSESYHKQLAALNCSVRDWIVK
HVNANPLCDLSPIFHDYEKYLAEIEQQGLAGHSSSGSSGSTKATEGQPRPAFGSSALQQG
STFFFNSSKSEDALGKKRESEKKIELKAATAFTTLFSLDKSDSSDLSSGAAGSGFSFSPK
KGGLFGKEASQAKVAPSFSNNALDAPTESSSHESTGAGEEEEEPPKVVINEVKEEDAFYS
KKCKVFYKKDNEFKEKGVGTLHLKPASNQKTQLLIRADTNLGNILLNILVPPNMPCSRTG
KNNVLIVCVPNPPIDEKNATVPLPILIRVKTSEDANELHKILLEKKEEV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagagtggcagagaaggagctgactgacagaaattgggatcaagaagaagaa
acggaggaggtgggaactttctcagtggccagtgaggaagttttaaagaacagaccaatt
aagaaggcaaagcgtagaaatgtagtgactgagtcagaaggtggtggagcttttaaggga
tttaaaggtttcgttttgccttccgggactggtgttttttctggtttcggaaatggcccc
ggaacaaaatcttttggcctgttatccaatggtggcggcagctccagtagcatcacgaac
agctcttcgctgtccagcttaaagacggcttcagaaacagaacctacatttagttcggtg
gtctccagcgtctcagccaatagtgttacccttgagaagacctctgcacacctggaagcc
aatggcgagaatccagagcccttgtcctcgggactcgctcagagcaaagcctgcaactca
gagagctatcataaacagttggctgcgctcaattgttctgtacgggactggatagtcaaa
cacgtcaacgccaaccctctctgtgacctgagccccatcttccacgactacgagaaatac
ttggcggagatagagcaacagggcctggctggccacagcagctccggaagcagcggcagc
accaaagccacggaaggccagcctcgtcctgcctttgggagttcggcccttcagcagggc
tccacgtttttctttaacagcagcaaatcggaggatgccctcgggaagaaaagagaatcg
gagaagaaaatagaacttaaagcagccaccgccttcaccaccttgttctctttggacaaa
agtgacagctctgatctgagttcaggggcggccgggtctggattctcattttcccctaaa
aaaggaggtttgttcggcaaagaggcaagtcaggccaaggtggctccttccttttccaat
aatgccttagacgccccgactgaaagcagtagccatgaatcaacaggggctggtgaggaa
gaggaagagccacccaaagtagtcattaatgaagtgaaagaagaggatgccttttactcg
aagaagtgcaaagtcttctacaagaaagataacgaattcaaagaaaagggagtaggaacg
ctacatttaaaacctgccagcaaccagaagactcagttgttaatacgggcagatactaac
ttaggcaatatattgctgaacattttggtgcctcccaacatgccatgttcaagaacaggg
aagaacaacgttctcattgtttgtgtcccaaacccacccattgatgaaaagaatgccaca
gtccctctgccaatattgataagggtgaaaacaagcgaagatgcaaatgagttgcacaaa
attttgctggagaaaaaagaggaggtctaa
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